RNA–Protein interactions for RNA: ENST00000410517.1

RNU6-1140P-201, Transcript of RNA, U6 small nuclear 1140, pseudogene, humanhuman

BASIC

Gene RNU6-1140P, Length 106 nt, Biotype snRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1140P-201ENST00000410517 RNF19AQ9NV58 838 aa3.9□□□□□ -1.79
RNU6-1140P-201ENST00000410517 PCDHGB7Q9Y5F8 929 aa3.9□□□□□ -1.79
RNU6-1140P-201ENST00000410517 SLC12A7Q9Y666 1083 aa3.9□□□□□ -1.79
RNU6-1140P-201ENST00000410517 SNCAIPQ9Y6H5 919 aa3.9□□□□□ -1.79
RNU6-1140P-201ENST00000410517 HMGXB3Q12766 1538 aa3.9□□□□□ -1.79
RNU6-1140P-201ENST00000410517 MCM4P33991 863 aa3.89□□□□□ -1.79
RNU6-1140P-201ENST00000410517 CNR2P34972 360 aa3.89□□□□□ -1.79
RNU6-1140P-201ENST00000410517 CAP2P40123 477 aa3.89□□□□□ -1.79
RNU6-1140P-201ENST00000410517 ETF1P62495 437 aaKnown RBP3.89□□□□□ -1.79
RNU6-1140P-201ENST00000410517 YBX1P67809 324 aaKnown RBP3.89□□□□□ -1.79
RNU6-1140P-201ENST00000410517 RPL6Q02878 288 aaKnown RBP3.89□□□□□ -1.79
RNU6-1140P-201ENST00000410517 LDHDQ86WU2 507 aa3.89□□□□□ -1.79
RNU6-1140P-201ENST00000410517 LOXL4Q96JB6 756 aa3.89□□□□□ -1.79
RNU6-1140P-201ENST00000410517 FERD3LQ96RJ6 166 aa3.89□□□□□ -1.79
RNU6-1140P-201ENST00000410517 KRTAP3-1Q9BYR8 98 aa3.89□□□□□ -1.79
RNU6-1140P-201ENST00000410517 KCNQ5Q9NR82 932 aa3.89□□□□□ -1.79
RNU6-1140P-201ENST00000410517 NOTOA8MTQ0 251 aa3.88□□□□□ -1.79
RNU6-1140P-201ENST00000410517 BUB1BO60566 1050 aaPredicted RBP3.88□□□□□ -1.79
RNU6-1140P-201ENST00000410517 FZD7O75084 574 aa3.88□□□□□ -1.79
RNU6-1140P-201ENST00000410517 EFEMP2O95967 443 aa3.88□□□□□ -1.79
RNU6-1140P-201ENST00000410517 CST3P01034 146 aaPredicted RBP3.88□□□□□ -1.79
RNU6-1140P-201ENST00000410517 PF4P02776 101 aa3.88□□□□□ -1.79
RNU6-1140P-201ENST00000410517 ATF4P18848 351 aaPredicted RBP3.88□□□□□ -1.79
RNU6-1140P-201ENST00000410517 NCKAP1LP55160 1127 aa3.88□□□□□ -1.79
RNU6-1140P-201ENST00000410517 INPP5AQ14642 412 aa3.88□□□□□ -1.79
RNU6-1140P-201ENST00000410517 NFE2L2Q16236 605 aa3.88□□□□□ -1.79
RNU6-1140P-201ENST00000410517 LDLRAD1Q5T700 205 aa3.88□□□□□ -1.79
RNU6-1140P-201ENST00000410517 SPRED1Q7Z699 444 aa3.88□□□□□ -1.79
RNU6-1140P-201ENST00000410517 HID1Q8IV36 788 aa3.88□□□□□ -1.79
RNU6-1140P-201ENST00000410517 ADGRG2Q8IZP9 1017 aa3.88□□□□□ -1.79
RNU6-1140P-201ENST00000410517 REXO1Q8N1G1 1221 aaKnown RBP3.88□□□□□ -1.79
RNU6-1140P-201ENST00000410517 SPATA25Q9BR10 227 aa3.88□□□□□ -1.79
RNU6-1140P-201ENST00000410517 C1QTNF3Q9BXJ4 246 aa3.88□□□□□ -1.79
RNU6-1140P-201ENST00000410517 TRIM55Q9BYV6 548 aa3.88□□□□□ -1.79
RNU6-1140P-201ENST00000410517 LAMC3Q9Y6N6 1575 aa3.88□□□□□ -1.79
RNU6-1140P-201ENST00000410517 A0A1B0GTL3 188 aa3.87□□□□□ -1.79
RNU6-1140P-201ENST00000410517 ABLIM1O14639 778 aa3.87□□□□□ -1.79
RNU6-1140P-201ENST00000410517 CLSTN1O94985 981 aa3.87□□□□□ -1.79
RNU6-1140P-201ENST00000410517 BMP6P22004 513 aa3.87□□□□□ -1.79
RNU6-1140P-201ENST00000410517 GTF2F1P35269 517 aaKnown RBP eCLIP3.87□□□□□ -1.79
RNU6-1140P-201ENST00000410517 ETV3P41162 512 aa3.87□□□□□ -1.79
RNU6-1140P-201ENST00000410517 RACK1P63244 317 aaKnown RBP3.87□□□□□ -1.79
RNU6-1140P-201ENST00000410517 FAM160A1Q05DH4 1040 aa3.87□□□□□ -1.79
RNU6-1140P-201ENST00000410517 SLC14A2Q15849 920 aa3.87□□□□□ -1.79
RNU6-1140P-201ENST00000410517 TAF7LQ5H9L4 462 aa3.87□□□□□ -1.79
RNU6-1140P-201ENST00000410517 LRFN4Q6PJG9 635 aa3.87□□□□□ -1.79
RNU6-1140P-201ENST00000410517 TMC6Q7Z403 805 aa3.87□□□□□ -1.79
RNU6-1140P-201ENST00000410517 SH3RF3Q8TEJ3 882 aaPredicted RBP3.87□□□□□ -1.79
RNU6-1140P-201ENST00000410517 LINC01599Q8WXQ3 324 aa3.87□□□□□ -1.79
RNU6-1140P-201ENST00000410517 JARID2Q92833 1246 aaPredicted RBP3.87□□□□□ -1.79
RNU6-1140P-201ENST00000410517 GPR62Q9BZJ7 368 aa3.87□□□□□ -1.79
RNU6-1140P-201ENST00000410517 WNT10AQ9GZT5 417 aa3.87□□□□□ -1.79
RNU6-1140P-201ENST00000410517 CRTAC1Q9NQ79 661 aa3.87□□□□□ -1.79
RNU6-1140P-201ENST00000410517 DUSP10Q9Y6W6 482 aa3.87□□□□□ -1.79
RNU6-1140P-201ENST00000410517 ATAD2BQ9ULI0 1458 aa3.86□□□□□ -1.79
RNU6-1140P-201ENST00000410517 GREM1O60565 184 aa3.86□□□□□ -1.79
RNU6-1140P-201ENST00000410517 USP2O75604 605 aaPredicted RBP3.86□□□□□ -1.79
RNU6-1140P-201ENST00000410517 NAT2P11245 290 aa3.86□□□□□ -1.79
RNU6-1140P-201ENST00000410517 TFE3P19532 575 aaPredicted RBP3.86□□□□□ -1.79
RNU6-1140P-201ENST00000410517 SOX9P48436 509 aa3.86□□□□□ -1.79
RNU6-1140P-201ENST00000410517 NASPP49321 788 aaPredicted RBP3.86□□□□□ -1.79
RNU6-1140P-201ENST00000410517 YARSP54577 528 aaKnown RBP3.86□□□□□ -1.79
RNU6-1140P-201ENST00000410517 EIF6P56537 245 aaKnown RBP3.86□□□□□ -1.79
RNU6-1140P-201ENST00000410517 FBXW10Q5XX13 1052 aa3.86□□□□□ -1.79
RNU6-1140P-201ENST00000410517 CRIP3Q6Q6R5 217 aa3.86□□□□□ -1.79
RNU6-1140P-201ENST00000410517 REC114Q7Z4M0 266 aa3.86□□□□□ -1.79
RNU6-1140P-201ENST00000410517 SLITRK4Q8IW52 837 aa3.86□□□□□ -1.79
RNU6-1140P-201ENST00000410517 NLGN1Q8N2Q7 840 aa3.86□□□□□ -1.79
RNU6-1140P-201ENST00000410517 RBM15Q96T37 977 aaKnown RBP eCLIP3.86□□□□□ -1.79
RNU6-1140P-201ENST00000410517 SRRTQ9BXP5 876 aaKnown RBP3.86□□□□□ -1.79
RNU6-1140P-201ENST00000410517 COPRSQ9NQ92 184 aa3.86□□□□□ -1.79
RNU6-1140P-201ENST00000410517 ADAM30Q9UKF2 790 aa3.86□□□□□ -1.79
RNU6-1140P-201ENST00000410517 TLR6Q9Y2C9 796 aa3.86□□□□□ -1.79
RNU6-1140P-201ENST00000410517 PCDHA5Q9Y5H7 936 aa3.86□□□□□ -1.79
RNU6-1140P-201ENST00000410517 FGRP09769 529 aa3.85□□□□□ -1.79
RNU6-1140P-201ENST00000410517 LIMS1P48059 325 aa3.85□□□□□ -1.79
RNU6-1140P-201ENST00000410517 RBM10P98175 930 aaKnown RBP3.85□□□□□ -1.79
RNU6-1140P-201ENST00000410517 TEKQ02763 1124 aa3.85□□□□□ -1.79
RNU6-1140P-201ENST00000410517 SEZ6Q53EL9 994 aa3.85□□□□□ -1.79
RNU6-1140P-201ENST00000410517 WIPI1Q5MNZ9 446 aaPredicted RBP3.85□□□□□ -1.79
RNU6-1140P-201ENST00000410517 FBXL19Q6PCT2 694 aa3.85□□□□□ -1.79
RNU6-1140P-201ENST00000410517 LIPIQ6XZB0 460 aa3.85□□□□□ -1.79
RNU6-1140P-201ENST00000410517 PLPPR2Q96GM1 343 aa3.85□□□□□ -1.79
RNU6-1140P-201ENST00000410517 SAMD11Q96NU1 681 aa3.85□□□□□ -1.79
RNU6-1140P-201ENST00000410517 DPH2Q9BQC3 489 aaPredicted RBP3.85□□□□□ -1.79
RNU6-1140P-201ENST00000410517 PCED1AQ9H1Q7 454 aa3.85□□□□□ -1.79
RNU6-1140P-201ENST00000410517 KLHL14Q9P2G3 628 aa3.85□□□□□ -1.79
RNU6-1140P-201ENST00000410517 ADAMTS1Q9UHI8 967 aa3.85□□□□□ -1.79
RNU6-1140P-201ENST00000410517 EFR3BQ9Y2G0 817 aa3.85□□□□□ -1.79
RNU6-1140P-201ENST00000410517 BAZ1BQ9UIG0 1483 aaKnown RBP3.85□□□□□ -1.79
RNU6-1140P-201ENST00000410517 PAGE1O75459 146 aa3.84□□□□□ -1.79
RNU6-1140P-201ENST00000410517 F13A1P00488 732 aa3.84□□□□□ -1.79
RNU6-1140P-201ENST00000410517 MPOP05164 745 aa3.84□□□□□ -1.79
RNU6-1140P-201ENST00000410517 PNLIPP16233 465 aa3.84□□□□□ -1.79
RNU6-1140P-201ENST00000410517 CCNFP41002 786 aa3.84□□□□□ -1.79
RNU6-1140P-201ENST00000410517 TNNI2P48788 182 aa3.84□□□□□ -1.79
RNU6-1140P-201ENST00000410517 SEPT6Q14141 434 aa3.84□□□□□ -1.79
RNU6-1140P-201ENST00000410517 NOP9Q86U38 636 aaKnown RBP3.84□□□□□ -1.79
RNU6-1140P-201ENST00000410517 TTC9BQ8N6N2 239 aa3.84□□□□□ -1.79
RNU6-1140P-201ENST00000410517 DTWD2Q8NBA8 298 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms