RNA–Protein interactions for RNA: ENST00000410054.5

R3HDM1-204, Transcript of R3H domain containing 1, humanhuman

TSL 2 BASIC

Gene R3HDM1, Length 4,442 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-204ENST00000410054 DUSP27Q5VZP5 1158 aa5.75□□□□□ -1.49
R3HDM1-204ENST00000410054 TRIM50Q86XT4 487 aa5.75□□□□□ -1.49
R3HDM1-204ENST00000410054 EZH1Q92800 747 aaPredicted RBP5.75□□□□□ -1.49
R3HDM1-204ENST00000410054 QKIQ96PU8 341 aaKnown RBP eCLIP5.75□□□□□ -1.492e-6■■■■□ 24.7
R3HDM1-204ENST00000410054 VPS16Q9H269 839 aa5.75□□□□□ -1.49
R3HDM1-204ENST00000410054 PSTPIP2Q9H939 334 aa5.75□□□□□ -1.49
R3HDM1-204ENST00000410054 TRIM39Q9HCM9 518 aa5.75□□□□□ -1.49
R3HDM1-204ENST00000410054 HPS4Q9NQG7 708 aa5.75□□□□□ -1.49
R3HDM1-204ENST00000410054 KMT5AQ9NQR1 393 aa5.75□□□□□ -1.49
R3HDM1-204ENST00000410054 USP40Q9NVE5 1235 aa5.75□□□□□ -1.49
R3HDM1-204ENST00000410054 PACSIN2Q9UNF0 486 aaPredicted RBP5.75□□□□□ -1.49
R3HDM1-204ENST00000410054 CADPSQ9ULU8 1353 aa5.74□□□□□ -1.49
R3HDM1-204ENST00000410054 ST18O60284 1047 aa5.74□□□□□ -1.49
R3HDM1-204ENST00000410054 NPPAP01160 153 aa5.74□□□□□ -1.49
R3HDM1-204ENST00000410054 HCLS1P14317 486 aaPredicted RBP5.74□□□□□ -1.49
R3HDM1-204ENST00000410054 MSR1P21757 451 aa5.74□□□□□ -1.49
R3HDM1-204ENST00000410054 SOX5P35711 763 aa5.74□□□□□ -1.49
R3HDM1-204ENST00000410054 PAPOLAP51003 745 aaKnown RBP5.74□□□□□ -1.49
R3HDM1-204ENST00000410054 TRMT10CQ7L0Y3 403 aaKnown RBP5.74□□□□□ -1.49
R3HDM1-204ENST00000410054 USP37Q86T82 979 aa5.74□□□□□ -1.49
R3HDM1-204ENST00000410054 NUP93Q8N1F7 819 aa5.74□□□□□ -1.49
R3HDM1-204ENST00000410054 RNASE11Q8TAA1 199 aaKnown RBP5.74□□□□□ -1.49
R3HDM1-204ENST00000410054 MCUR1Q96AQ8 359 aa5.74□□□□□ -1.49
R3HDM1-204ENST00000410054 SPACA7Q96KW9 195 aa5.74□□□□□ -1.49
R3HDM1-204ENST00000410054 FAM192AQ9GZU8 254 aa5.74□□□□□ -1.49
R3HDM1-204ENST00000410054 BHMT2Q9H2M3 363 aa5.74□□□□□ -1.49
R3HDM1-204ENST00000410054 PCDH12Q9NPG4 1184 aa5.74□□□□□ -1.49
R3HDM1-204ENST00000410054 STK39Q9UEW8 545 aa5.74□□□□□ -1.49
R3HDM1-204ENST00000410054 SEMA3DO95025 777 aa5.74□□□□□ -1.49
R3HDM1-204ENST00000410054 CTAGE8P0CG41 777 aa5.74□□□□□ -1.49
R3HDM1-204ENST00000410054 MCF2P10911 925 aa5.74□□□□□ -1.49
R3HDM1-204ENST00000410054 XRCC5P13010 732 aaKnown RBP5.74□□□□□ -1.49
R3HDM1-204ENST00000410054 CASTP20810 708 aaKnown RBP5.74□□□□□ -1.49
R3HDM1-204ENST00000410054 POLR2BP30876 1174 aaKnown RBP5.74□□□□□ -1.49
R3HDM1-204ENST00000410054 HOXC8P31273 242 aa5.74□□□□□ -1.49
R3HDM1-204ENST00000410054 ACTN2P35609 894 aa5.74□□□□□ -1.49
R3HDM1-204ENST00000410054 MTX1Q13505 466 aa5.74□□□□□ -1.49
R3HDM1-204ENST00000410054 ARHGEF6Q15052 776 aa5.74□□□□□ -1.49
R3HDM1-204ENST00000410054 CCDC142Q17RM4 750 aa5.74□□□□□ -1.49
R3HDM1-204ENST00000410054 KCTD21Q4G0X4 260 aa5.74□□□□□ -1.49
R3HDM1-204ENST00000410054 PRR23CQ6ZRP0 262 aa5.74□□□□□ -1.49
R3HDM1-204ENST00000410054 CTAGE4Q8IX94 777 aa5.74□□□□□ -1.49
R3HDM1-204ENST00000410054 SLC22A8Q8TCC7 542 aa5.74□□□□□ -1.49
R3HDM1-204ENST00000410054 PDCD6IPQ8WUM4 868 aaKnown RBP5.74□□□□□ -1.49
R3HDM1-204ENST00000410054 UBAC1Q9BSL1 405 aa5.74□□□□□ -1.49
R3HDM1-204ENST00000410054 ZBTB21Q9ULJ3 1066 aa5.74□□□□□ -1.49
R3HDM1-204ENST00000410054 IPPQ9Y573 584 aa5.74□□□□□ -1.49
R3HDM1-204ENST00000410054 RSPH10B2B2RC85 870 aa5.74□□□□□ -1.49
R3HDM1-204ENST00000410054 NOP56O00567 594 aaKnown RBP5.74□□□□□ -1.49
R3HDM1-204ENST00000410054 CDC45O75419 566 aa5.74□□□□□ -1.49
R3HDM1-204ENST00000410054 RSPH10BP0C881 870 aa5.74□□□□□ -1.49
R3HDM1-204ENST00000410054 IFNAR2P48551 515 aa5.74□□□□□ -1.49
R3HDM1-204ENST00000410054 AKR1D1P51857 326 aa5.74□□□□□ -1.49
R3HDM1-204ENST00000410054 EXOSC9Q06265 439 aaKnown RBP5.74□□□□□ -1.49
R3HDM1-204ENST00000410054 RCN2Q14257 317 aa5.74□□□□□ -1.49
R3HDM1-204ENST00000410054 CAMK4Q16566 473 aa5.74□□□□□ -1.49
R3HDM1-204ENST00000410054 NDUFA5Q16718 116 aa5.74□□□□□ -1.49
R3HDM1-204ENST00000410054 MAP3K21Q5TCX8 1036 aa5.74□□□□□ -1.49
R3HDM1-204ENST00000410054 UBR7Q8N806 425 aa5.74□□□□□ -1.49
R3HDM1-204ENST00000410054 CDC26Q8NHZ8 85 aa5.74□□□□□ -1.49
R3HDM1-204ENST00000410054 MIEF2Q96C03 454 aa5.74□□□□□ -1.49
R3HDM1-204ENST00000410054 NRBF2Q96F24 287 aa5.74□□□□□ -1.49
R3HDM1-204ENST00000410054 ABHD8Q96I13 439 aa5.74□□□□□ -1.49
R3HDM1-204ENST00000410054 GDAP1L1Q96MZ0 367 aa5.74□□□□□ -1.49
R3HDM1-204ENST00000410054 PANK2Q9BZ23 570 aa5.74□□□□□ -1.49
R3HDM1-204ENST00000410054 TRIM45Q9H8W5 580 aaPredicted RBP5.74□□□□□ -1.49
R3HDM1-204ENST00000410054 ABCF3Q9NUQ8 709 aa5.74□□□□□ -1.49
R3HDM1-204ENST00000410054 HACD3Q9P035 362 aa5.74□□□□□ -1.49
R3HDM1-204ENST00000410054 SUN2Q9UH99 717 aa5.74□□□□□ -1.49
R3HDM1-204ENST00000410054 GOLGA8KD6RF30 607 aa5.73□□□□□ -1.49
R3HDM1-204ENST00000410054 WBP4O75554 376 aaKnown RBP5.73□□□□□ -1.49
R3HDM1-204ENST00000410054 PAMP19021 973 aa5.73□□□□□ -1.49
R3HDM1-204ENST00000410054 SMTNP53814 917 aa5.73□□□□□ -1.49
R3HDM1-204ENST00000410054 MRPS25P82663 173 aaKnown RBP5.73□□□□□ -1.49
R3HDM1-204ENST00000410054 ZBED6P86452 979 aa5.73□□□□□ -1.49
R3HDM1-204ENST00000410054 TRIM25Q14258 630 aaKnown RBP5.73□□□□□ -1.49
R3HDM1-204ENST00000410054 UGP2Q16851 508 aa5.73□□□□□ -1.49
R3HDM1-204ENST00000410054 RNF207Q6ZRF8 634 aa5.73□□□□□ -1.49
R3HDM1-204ENST00000410054 ANKS4BQ8N8V4 417 aa5.73□□□□□ -1.49
R3HDM1-204ENST00000410054 TTC17Q96AE7 1141 aa5.73□□□□□ -1.49
R3HDM1-204ENST00000410054 MAML3Q96JK9 1138 aa5.73□□□□□ -1.49
R3HDM1-204ENST00000410054 DHRS1Q96LJ7 313 aa5.73□□□□□ -1.49
R3HDM1-204ENST00000410054 APOL6Q9BWW8 343 aa5.73□□□□□ -1.49
R3HDM1-204ENST00000410054 ROGDIQ9GZN7 287 aa5.73□□□□□ -1.49
R3HDM1-204ENST00000410054 C10orf88Q9H8K7 445 aa5.73□□□□□ -1.49
R3HDM1-204ENST00000410054 C12orf4Q9NQ89 552 aa5.73□□□□□ -1.49
R3HDM1-204ENST00000410054 DDX56Q9NY93 547 aaKnown RBP5.73□□□□□ -1.49
R3HDM1-204ENST00000410054 MRPS23Q9Y3D9 190 aaKnown RBP5.73□□□□□ -1.49
R3HDM1-204ENST00000410054 EID1Q9Y6B2 187 aa5.73□□□□□ -1.49
R3HDM1-204ENST00000410054 KRT87PA6NCN2 255 aa5.73□□□□□ -1.49
R3HDM1-204ENST00000410054 C9IYK1 514 aa5.73□□□□□ -1.49
R3HDM1-204ENST00000410054 MEN1O00255 615 aa5.73□□□□□ -1.49
R3HDM1-204ENST00000410054 SLC4A1P02730 911 aa5.73□□□□□ -1.49
R3HDM1-204ENST00000410054 THEGLP0DJG4 465 aa5.73□□□□□ -1.49
R3HDM1-204ENST00000410054 SLC12A2P55011 1212 aa5.73□□□□□ -1.49
R3HDM1-204ENST00000410054 UBASH3AP57075 661 aa5.73□□□□□ -1.49
R3HDM1-204ENST00000410054 NFX1Q12986 1120 aaKnown RBP5.73□□□□□ -1.49
R3HDM1-204ENST00000410054 MOGSQ13724 837 aa5.73□□□□□ -1.49
R3HDM1-204ENST00000410054 ACAP1Q15027 740 aa5.73□□□□□ -1.49
R3HDM1-204ENST00000410054 ELOA2Q8IYF1 753 aaPredicted RBP5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms