RNA–Protein interactions for RNA: ENST00000409469.5

CUL1-202, Transcript of cullin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUL1, Length 2,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL1-202ENST00000409469 CACTINQ8WUQ7 758 aaKnown RBP11.3□□□□□ -0.6
CUL1-202ENST00000409469 ZNF500O60304 480 aaPredicted RBP11.29□□□□□ -0.6
CUL1-202ENST00000409469 CCNT1O60563 726 aaKnown RBP11.29□□□□□ -0.6
CUL1-202ENST00000409469 C4orf32Q8N8J7 132 aa11.29□□□□□ -0.6
CUL1-202ENST00000409469 MTRQ99707 1265 aa11.29□□□□□ -0.6
CUL1-202ENST00000409469 FANCLQ9NW38 375 aa11.29□□□□□ -0.6
CUL1-202ENST00000409469 SIPA1L1O43166 1804 aa11.29□□□□□ -0.6
CUL1-202ENST00000409469 STX17P56962 302 aa11.29□□□□□ -0.6
CUL1-202ENST00000409469 ZNF579Q8NAF0 562 aaKnown RBP11.29□□□□□ -0.6
CUL1-202ENST00000409469 CCDC148Q8NFR7 591 aa11.29□□□□□ -0.6
CUL1-202ENST00000409469 SMARCE1Q969G3 411 aa11.29□□□□□ -0.6
CUL1-202ENST00000409469 PAGE5Q96GU1 130 aa11.29□□□□□ -0.6
CUL1-202ENST00000409469 MED15Q96RN5 788 aa11.29□□□□□ -0.6
CUL1-202ENST00000409469 CSRNP1Q96S65 589 aa11.29□□□□□ -0.6
CUL1-202ENST00000409469 TRIM34Q9BYJ4 488 aa11.29□□□□□ -0.6
CUL1-202ENST00000409469 JMJD4Q9H9V9 463 aa11.29□□□□□ -0.6
CUL1-202ENST00000409469 VEZTQ9HBM0 779 aa11.29□□□□□ -0.6
CUL1-202ENST00000409469 R3HCC1Q9Y3T6 440 aaKnown RBP11.29□□□□□ -0.6
CUL1-202ENST00000409469 CAVIN2O95810 425 aa11.28□□□□□ -0.6
CUL1-202ENST00000409469 NOVP48745 357 aa11.28□□□□□ -0.6
CUL1-202ENST00000409469 GOLGA8FQ08AF8 430 aa11.28□□□□□ -0.6
CUL1-202ENST00000409469 ZNF543Q08ER8 600 aa11.28□□□□□ -0.6
CUL1-202ENST00000409469 GOLGA8DPQ0D2H9 430 aa11.28□□□□□ -0.6
CUL1-202ENST00000409469 CCDC84Q86UT8 332 aaPredicted RBP11.28□□□□□ -0.6
CUL1-202ENST00000409469 TBCKQ8TEA7 893 aa11.28□□□□□ -0.6
CUL1-202ENST00000409469 LRRC15Q8TF66 581 aa11.28□□□□□ -0.6
CUL1-202ENST00000409469 ZMYND12Q9H0C1 365 aa11.28□□□□□ -0.6
CUL1-202ENST00000409469 MAPK8IP1Q9UQF2 711 aa11.28□□□□□ -0.6
CUL1-202ENST00000409469 SOGA3Q5TF21 947 aa11.28□□□□□ -0.6
CUL1-202ENST00000409469 SIAH1Q8IUQ4 282 aa11.28□□□□□ -0.6
CUL1-202ENST00000409469 RASSF8Q8NHQ8 419 aa11.28□□□□□ -0.6
CUL1-202ENST00000409469 FERMT2Q96AC1 680 aa11.28□□□□□ -0.6
CUL1-202ENST00000409469 SH3GLB2Q9NR46 395 aa11.28□□□□□ -0.6
CUL1-202ENST00000409469 PI4KBQ9UBF8 816 aa11.28□□□□□ -0.6
CUL1-202ENST00000409469 SWAP70Q9UH65 585 aa11.28□□□□□ -0.6
CUL1-202ENST00000409469 PLIN4Q96Q06 1357 aa11.28□□□□□ -0.6
CUL1-202ENST00000409469 ZNF646O15015 1829 aaPredicted RBP11.27□□□□□ -0.6
CUL1-202ENST00000409469 GH2P01242 217 aa11.27□□□□□ -0.6
CUL1-202ENST00000409469 CD44P16070 742 aaKnown RBP11.27□□□□□ -0.6
CUL1-202ENST00000409469 CUL4BQ13620 913 aa11.27□□□□□ -0.6
CUL1-202ENST00000409469 CCDC93Q567U6 631 aa11.27□□□□□ -0.6
CUL1-202ENST00000409469 DNTTIP2Q5QJE6 756 aaKnown RBP11.27□□□□□ -0.6
CUL1-202ENST00000409469 MIGA2Q7L4E1 593 aa11.27□□□□□ -0.6
CUL1-202ENST00000409469 POTEDQ86YR6 584 aa11.27□□□□□ -0.6
CUL1-202ENST00000409469 RIOX1Q9H6W3 641 aa11.27□□□□□ -0.6
CUL1-202ENST00000409469 SERPINA10Q9UK55 444 aa11.27□□□□□ -0.6
CUL1-202ENST00000409469 C10orf71Q711Q0 1435 aa11.27□□□□□ -0.6
CUL1-202ENST00000409469 TMEM232C9JQI7 657 aa11.27□□□□□ -0.61
CUL1-202ENST00000409469 TDP2O95551 362 aa11.27□□□□□ -0.61
CUL1-202ENST00000409469 SNHG28P0DPA3 235 aa11.27□□□□□ -0.61
CUL1-202ENST00000409469 TNNI2P48788 182 aa11.27□□□□□ -0.61
CUL1-202ENST00000409469 NOLC1Q14978 699 aaKnown RBP eCLIP11.27□□□□□ -0.61
CUL1-202ENST00000409469 ZYXQ15942 572 aaKnown RBP11.27□□□□□ -0.61
CUL1-202ENST00000409469 SARM1Q6SZW1 724 aa11.27□□□□□ -0.61
CUL1-202ENST00000409469 IDI2Q9BXS1 227 aa11.27□□□□□ -0.61
CUL1-202ENST00000409469 GOLGA6L6A8MZA4 724 aa11.26□□□□□ -0.61
CUL1-202ENST00000409469 CLGNO14967 610 aa11.26□□□□□ -0.61
CUL1-202ENST00000409469 EGFRP00533 1210 aa11.26□□□□□ -0.61
CUL1-202ENST00000409469 SLFN14P0C7P3 912 aa11.26□□□□□ -0.61
CUL1-202ENST00000409469 ECE1P42892 770 aa11.26□□□□□ -0.61
CUL1-202ENST00000409469 SLC1A4P43007 532 aa11.26□□□□□ -0.61
CUL1-202ENST00000409469 ICA1Q05084 483 aa11.26□□□□□ -0.61
CUL1-202ENST00000409469 DHX8Q14562 1220 aaKnown RBP11.26□□□□□ -0.61
CUL1-202ENST00000409469 E2F4Q16254 413 aa11.26□□□□□ -0.61
CUL1-202ENST00000409469 TMC6Q7Z403 805 aa11.26□□□□□ -0.61
CUL1-202ENST00000409469 REXO1Q8N1G1 1221 aaKnown RBP11.26□□□□□ -0.61
CUL1-202ENST00000409469 TMEM39BQ9GZU3 492 aa11.26□□□□□ -0.61
CUL1-202ENST00000409469 C6orf50Q9HD87 102 aa11.26□□□□□ -0.61
CUL1-202ENST00000409469 SAMSN1Q9NSI8 373 aaKnown RBP11.26□□□□□ -0.61
CUL1-202ENST00000409469 MYH4Q9Y623 1939 aa11.26□□□□□ -0.61
CUL1-202ENST00000409469 SLC37A4O43826 429 aa11.26□□□□□ -0.61
CUL1-202ENST00000409469 TECP42680 631 aa11.26□□□□□ -0.61
CUL1-202ENST00000409469 SARSP49591 514 aaKnown RBP11.26□□□□□ -0.61
CUL1-202ENST00000409469 FANCCQ00597 558 aa11.26□□□□□ -0.61
CUL1-202ENST00000409469 MYL5Q02045 173 aa11.26□□□□□ -0.61
CUL1-202ENST00000409469 DPYDQ12882 1025 aa11.26□□□□□ -0.61
CUL1-202ENST00000409469 IKQ13123 557 aaPredicted RBP11.26□□□□□ -0.61
CUL1-202ENST00000409469 ASPRV1Q53RT3 343 aa11.26□□□□□ -0.61
CUL1-202ENST00000409469 RBM26Q5T8P6 1007 aaKnown RBP11.26□□□□□ -0.61
CUL1-202ENST00000409469 LZTS2Q9BRK4 669 aa11.26□□□□□ -0.61
CUL1-202ENST00000409469 A0A1W2PRG0 241 aa11.26□□□□□ -0.61
CUL1-202ENST00000409469 USP17L15C9J2P7 530 aa11.26□□□□□ -0.61
CUL1-202ENST00000409469 USP17L13C9JLJ4 530 aa11.26□□□□□ -0.61
CUL1-202ENST00000409469 USP17L11C9JVI0 530 aa11.26□□□□□ -0.61
CUL1-202ENST00000409469 USP17L18D6R9N7 530 aa11.26□□□□□ -0.61
CUL1-202ENST00000409469 USP17L22D6RA61 530 aa11.26□□□□□ -0.61
CUL1-202ENST00000409469 USP17L17D6RBQ6 530 aa11.26□□□□□ -0.61
CUL1-202ENST00000409469 USP17L19D6RCP7 530 aa11.26□□□□□ -0.61
CUL1-202ENST00000409469 USP17L20D6RJB6 530 aa11.26□□□□□ -0.61
CUL1-202ENST00000409469 EDIL3O43854 480 aa11.26□□□□□ -0.61
CUL1-202ENST00000409469 SERPINC1P01008 464 aa11.26□□□□□ -0.61
CUL1-202ENST00000409469 TRAPPC10P48553 1259 aa11.26□□□□□ -0.61
CUL1-202ENST00000409469 USP17L24Q0WX57 530 aa11.26□□□□□ -0.61
CUL1-202ENST00000409469 MORC3Q14149 939 aa11.26□□□□□ -0.61
CUL1-202ENST00000409469 NONOQ15233 471 aaKnown RBP eCLIP11.26□□□□□ -0.612e-8■■■■■ 28.9
CUL1-202ENST00000409469 USH1GQ495M9 461 aa11.26□□□□□ -0.61
CUL1-202ENST00000409469 TMCO4Q5TGY1 634 aa11.26□□□□□ -0.61
CUL1-202ENST00000409469 RSBN1LQ6PCB5 846 aaPredicted RBP11.26□□□□□ -0.61
CUL1-202ENST00000409469 USP17L6PQ6QN14 398 aa11.26□□□□□ -0.61
CUL1-202ENST00000409469 DTHD1Q6ZMT9 781 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms