RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 LRGUKQ96M69 825 aa13.18□□□□□ -0.3
SMCR8-201ENST00000406438 DISC1Q9NRI5 854 aa13.18□□□□□ -0.3
SMCR8-201ENST00000406438 COL17A1Q9UMD9 1497 aaPredicted RBP13.18□□□□□ -0.3
SMCR8-201ENST00000406438 DLATP10515 647 aaKnown RBP13.18□□□□□ -0.3
SMCR8-201ENST00000406438 RNF8O76064 485 aa13.18□□□□□ -0.3
SMCR8-201ENST00000406438 ANKRD42Q8N9B4 389 aa13.18□□□□□ -0.3
SMCR8-201ENST00000406438 TPCN1Q9ULQ1 816 aa13.18□□□□□ -0.3
SMCR8-201ENST00000406438 POLR2MP0CAP2 368 aa13.18□□□□□ -0.3
SMCR8-201ENST00000406438 GCKRQ14397 625 aa13.18□□□□□ -0.3
SMCR8-201ENST00000406438 TTBK2Q6IQ55 1244 aa13.18□□□□□ -0.3
SMCR8-201ENST00000406438 CHMP6Q96FZ7 201 aa13.18□□□□□ -0.3
SMCR8-201ENST00000406438 KCNJ14Q9UNX9 436 aa13.18□□□□□ -0.3
SMCR8-201ENST00000406438 FRMPD2Q68DX3 1309 aaPredicted RBP13.18□□□□□ -0.3
SMCR8-201ENST00000406438 CDR2Q01850 454 aa13.18□□□□□ -0.3
SMCR8-201ENST00000406438 FAM8A1Q9UBU6 413 aa13.18□□□□□ -0.3
SMCR8-201ENST00000406438 KIAA0556O60303 1618 aa13.18□□□□□ -0.3
SMCR8-201ENST00000406438 GALNT17Q6IS24 598 aa13.18□□□□□ -0.3
SMCR8-201ENST00000406438 MYL10Q9BUA6 226 aa13.18□□□□□ -0.3
SMCR8-201ENST00000406438 IRAK4Q9NWZ3 460 aa13.18□□□□□ -0.3
SMCR8-201ENST00000406438 ARMCX3Q9UH62 379 aaPredicted RBP13.18□□□□□ -0.3
SMCR8-201ENST00000406438 TLR3O15455 904 aaKnown RBP13.18□□□□□ -0.3
SMCR8-201ENST00000406438 SMIM24O75264 130 aa13.18□□□□□ -0.3
SMCR8-201ENST00000406438 TSTA3Q13630 321 aaPredicted RBP13.18□□□□□ -0.3
SMCR8-201ENST00000406438 RABEP2Q9H5N1 569 aa13.18□□□□□ -0.3
SMCR8-201ENST00000406438 USP40Q9NVE5 1235 aa13.18□□□□□ -0.3
SMCR8-201ENST00000406438 ABCC10Q5T3U5 1492 aa13.17□□□□□ -0.3
SMCR8-201ENST00000406438 ARHGEF10O15013 1369 aa13.17□□□□□ -0.3
SMCR8-201ENST00000406438 TRIM37O94972 964 aa13.17□□□□□ -0.3
SMCR8-201ENST00000406438 SERPINB6P35237 376 aa13.17□□□□□ -0.3
SMCR8-201ENST00000406438 LMNB2Q03252 620 aa13.17□□□□□ -0.3
SMCR8-201ENST00000406438 WHAMMP3Q1A5X7 153 aa13.17□□□□□ -0.3
SMCR8-201ENST00000406438 CDC37L1Q7L3B6 337 aa13.17□□□□□ -0.3
SMCR8-201ENST00000406438 RAB44Q7Z6P3 723 aaPredicted RBP13.17□□□□□ -0.3
SMCR8-201ENST00000406438 SPDL1Q96EA4 605 aa13.17□□□□□ -0.3
SMCR8-201ENST00000406438 KDRP35968 1356 aa13.17□□□□□ -0.3
SMCR8-201ENST00000406438 SHROOM2Q13796 1616 aa13.17□□□□□ -0.3
SMCR8-201ENST00000406438 BAG2O95816 211 aa13.17□□□□□ -0.3
SMCR8-201ENST00000406438 XPAP23025 273 aaPredicted RBP13.17□□□□□ -0.3
SMCR8-201ENST00000406438 ABI1Q8IZP0 508 aa13.17□□□□□ -0.3
SMCR8-201ENST00000406438 ANKRD35Q8N283 1001 aa13.17□□□□□ -0.3
SMCR8-201ENST00000406438 OR8K1Q8NGG5 319 aa13.17□□□□□ -0.3
SMCR8-201ENST00000406438 ZSCAN10Q96SZ4 725 aaPredicted RBP13.17□□□□□ -0.3
SMCR8-201ENST00000406438 DSCC1Q9BVC3 393 aa13.17□□□□□ -0.3
SMCR8-201ENST00000406438 E7EWF7 191 aa13.17□□□□□ -0.3
SMCR8-201ENST00000406438 ATF2P15336 505 aa13.17□□□□□ -0.3
SMCR8-201ENST00000406438 XKR9Q5GH70 373 aa13.17□□□□□ -0.3
SMCR8-201ENST00000406438 FAM160B1Q5W0V3 765 aa13.17□□□□□ -0.3
SMCR8-201ENST00000406438 DBNDD2Q9BQY9 259 aa13.17□□□□□ -0.3
SMCR8-201ENST00000406438 PPFIA4O75335 1185 aa13.17□□□□□ -0.3
SMCR8-201ENST00000406438 TMEM191BP0C7N4 346 aa13.17□□□□□ -0.3
SMCR8-201ENST00000406438 CERKLQ49MI3 558 aaPredicted RBP13.17□□□□□ -0.3
SMCR8-201ENST00000406438 DNAJC8O75937 253 aaPredicted RBP13.17□□□□□ -0.3
SMCR8-201ENST00000406438 HEXIM1O94992 359 aaKnown RBP13.17□□□□□ -0.3
SMCR8-201ENST00000406438 TTC4O95801 387 aa13.17□□□□□ -0.3
SMCR8-201ENST00000406438 OAS2P29728 719 aaKnown RBP13.17□□□□□ -0.3
SMCR8-201ENST00000406438 KRT24Q2M2I5 525 aa13.17□□□□□ -0.3
SMCR8-201ENST00000406438 TRIM68Q6AZZ1 485 aa13.17□□□□□ -0.3
SMCR8-201ENST00000406438 hCG_1642624A0A1W2PR95 340 aa13.16□□□□□ -0.3
SMCR8-201ENST00000406438 GOLGA8KD6RF30 607 aa13.16□□□□□ -0.3
SMCR8-201ENST00000406438 SF3A3Q12874 501 aaKnown RBP eCLIP13.16□□□□□ -0.3
SMCR8-201ENST00000406438 SPATS2Q86XZ4 545 aaKnown RBP13.16□□□□□ -0.3
SMCR8-201ENST00000406438 HIP1RO75146 1068 aa13.16□□□□□ -0.3
SMCR8-201ENST00000406438 ADKP55263 362 aaKnown RBP13.16□□□□□ -0.3
SMCR8-201ENST00000406438 PPARAQ07869 468 aa13.16□□□□□ -0.3
SMCR8-201ENST00000406438 LRRC43Q8N309 656 aa13.16□□□□□ -0.3
SMCR8-201ENST00000406438 BBOF1Q8ND07 529 aa13.16□□□□□ -0.3
SMCR8-201ENST00000406438 MED23Q9ULK4 1368 aa13.16□□□□□ -0.3
SMCR8-201ENST00000406438 PARD3BQ8TEW8 1205 aa13.16□□□□□ -0.3
SMCR8-201ENST00000406438 PHACTR3Q96KR7 559 aa13.16□□□□□ -0.3
SMCR8-201ENST00000406438 KIF9Q9HAQ2 790 aa13.16□□□□□ -0.3
SMCR8-201ENST00000406438 BAIAP2L1Q9UHR4 511 aa13.16□□□□□ -0.3
SMCR8-201ENST00000406438 SGSM2O43147 1006 aa13.16□□□□□ -0.3
SMCR8-201ENST00000406438 TSC1Q92574 1164 aa13.16□□□□□ -0.3
SMCR8-201ENST00000406438 DCPSQ96C86 337 aaKnown RBP13.16□□□□□ -0.3
SMCR8-201ENST00000406438 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.16□□□□□ -0.3
SMCR8-201ENST00000406438 NCKAP5LQ9HCH0 1330 aa13.16□□□□□ -0.3
SMCR8-201ENST00000406438 LRRIQ4A6NIV6 560 aa13.16□□□□□ -0.3
SMCR8-201ENST00000406438 SGK1O00141 431 aa13.16□□□□□ -0.3
SMCR8-201ENST00000406438 ZNF654Q8IZM8 581 aa13.16□□□□□ -0.3
SMCR8-201ENST00000406438 BLIDQ8IZY5 108 aa13.16□□□□□ -0.3
SMCR8-201ENST00000406438 TEKT3Q9BXF9 490 aa13.16□□□□□ -0.3
SMCR8-201ENST00000406438 RLBP1P12271 317 aa13.16□□□□□ -0.3
SMCR8-201ENST00000406438 PHEXP78562 749 aa13.16□□□□□ -0.3
SMCR8-201ENST00000406438 FAM47AQ5JRC9 791 aa13.16□□□□□ -0.3
SMCR8-201ENST00000406438 KRT40Q6A162 431 aa13.16□□□□□ -0.3
SMCR8-201ENST00000406438 SESTD1Q86VW0 696 aa13.16□□□□□ -0.3
SMCR8-201ENST00000406438 BZW2Q9Y6E2 419 aaKnown RBP13.16□□□□□ -0.3
SMCR8-201ENST00000406438 PASKQ96RG2 1323 aa13.15□□□□□ -0.3
SMCR8-201ENST00000406438 SPDYE2BA6NHP3 402 aa13.15□□□□□ -0.3
SMCR8-201ENST00000406438 ZBTB7BO15156 539 aaPredicted RBP13.15□□□□□ -0.3
SMCR8-201ENST00000406438 XPOTO43592 962 aaKnown RBP13.15□□□□□ -0.3
SMCR8-201ENST00000406438 IGSF3O75054 1194 aa13.15□□□□□ -0.3
SMCR8-201ENST00000406438 INHBAP08476 426 aa13.15□□□□□ -0.3
SMCR8-201ENST00000406438 SPDYE6P0CI01 402 aa13.15□□□□□ -0.3
SMCR8-201ENST00000406438 ARHGEF6Q15052 776 aa13.15□□□□□ -0.3
SMCR8-201ENST00000406438 PDCD2Q16342 344 aaPredicted RBP13.15□□□□□ -0.3
SMCR8-201ENST00000406438 BBS5Q8N3I7 341 aa13.15□□□□□ -0.3
SMCR8-201ENST00000406438 MYRIPQ8NFW9 859 aa13.15□□□□□ -0.3
SMCR8-201ENST00000406438 MRPL46Q9H2W6 279 aaKnown RBP13.15□□□□□ -0.3
SMCR8-201ENST00000406438 MAD1L1Q9Y6D9 718 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms