RNA–Protein interactions for RNA: ENST00000405546.7

ATG4B-206, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2 BASIC

Gene ATG4B, Length 3,294 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-206ENST00000405546 KAT2BQ92831 832 aa16.83■□□□□ 0.29
ATG4B-206ENST00000405546 TRIM47Q96LD4 638 aa16.83■□□□□ 0.29
ATG4B-206ENST00000405546 MYCBPQ99417 103 aaPredicted RBP16.83■□□□□ 0.29
ATG4B-206ENST00000405546 MYH7P12883 1935 aa16.83■□□□□ 0.29
ATG4B-206ENST00000405546 MYO1BO43795 1136 aa16.83■□□□□ 0.28
ATG4B-206ENST00000405546 CORO7P57737 925 aa16.83■□□□□ 0.28
ATG4B-206ENST00000405546 KCTD19Q17RG1 926 aaPredicted RBP16.83■□□□□ 0.28
ATG4B-206ENST00000405546 CCDC178Q5BJE1 867 aa16.83■□□□□ 0.28
ATG4B-206ENST00000405546 THRAP3Q9Y2W1 955 aaKnown RBP16.83■□□□□ 0.28
ATG4B-206ENST00000405546 GOLGA6L9A6NEM1 432 aa16.83■□□□□ 0.28
ATG4B-206ENST00000405546 MARCH6O60337 910 aa16.83■□□□□ 0.28
ATG4B-206ENST00000405546 ECM2O94769 699 aaPredicted RBP16.83■□□□□ 0.28
ATG4B-206ENST00000405546 KRT9P35527 623 aa16.83■□□□□ 0.28
ATG4B-206ENST00000405546 RCAN1P53805 252 aa16.83■□□□□ 0.28
ATG4B-206ENST00000405546 ATP2C1P98194 919 aaPredicted RBP16.83■□□□□ 0.28
ATG4B-206ENST00000405546 PICALMQ13492 652 aa16.83■□□□□ 0.28
ATG4B-206ENST00000405546 UBA5Q9GZZ9 404 aa16.83■□□□□ 0.28
ATG4B-206ENST00000405546 PSD3Q9NYI0 1048 aa16.83■□□□□ 0.28
ATG4B-206ENST00000405546 PPP1R3GB7ZBB8 358 aa16.82■□□□□ 0.28
ATG4B-206ENST00000405546 C6orf229H3BNL8 230 aa16.82■□□□□ 0.28
ATG4B-206ENST00000405546 RPN1P04843 607 aaKnown RBP16.82■□□□□ 0.28
ATG4B-206ENST00000405546 MATR3P43243 847 aaKnown RBP eCLIP16.82■□□□□ 0.285e-10■■□□□ 12.9
ATG4B-206ENST00000405546 FXR1P51114 621 aaKnown RBP eCLIP16.82■□□□□ 0.28
ATG4B-206ENST00000405546 KRT31Q15323 416 aa16.82■□□□□ 0.28
ATG4B-206ENST00000405546 GRIK5Q16478 980 aa16.82■□□□□ 0.28
ATG4B-206ENST00000405546 NT5DC1Q5TFE4 455 aa16.82■□□□□ 0.28
ATG4B-206ENST00000405546 ARHGEF1Q92888 912 aaKnown RBP16.82■□□□□ 0.28
ATG4B-206ENST00000405546 MAGEC2Q9UBF1 373 aaPredicted RBP16.82■□□□□ 0.28
ATG4B-206ENST00000405546 SLIT2O94813 1529 aa16.82■□□□□ 0.28
ATG4B-206ENST00000405546 DISP2A7MBM2 1401 aa16.82■□□□□ 0.28
ATG4B-206ENST00000405546 GOLGB1Q14789 3259 aaKnown RBP16.82■□□□□ 0.28
ATG4B-206ENST00000405546 A0A1B0GTH6 734 aa16.82■□□□□ 0.28
ATG4B-206ENST00000405546 SOGA3Q5TF21 947 aa16.82■□□□□ 0.28
ATG4B-206ENST00000405546 CEP112Q8N8E3 955 aa16.82■□□□□ 0.28
ATG4B-206ENST00000405546 RPGRQ92834 1020 aaKnown RBP16.82■□□□□ 0.28
ATG4B-206ENST00000405546 MYH2Q9UKX2 1941 aa16.82■□□□□ 0.28
ATG4B-206ENST00000405546 XDHP47989 1333 aa16.82■□□□□ 0.28
ATG4B-206ENST00000405546 CCNT1O60563 726 aaKnown RBP16.81■□□□□ 0.28
ATG4B-206ENST00000405546 USP17L2Q6R6M4 530 aa16.81■□□□□ 0.28
ATG4B-206ENST00000405546 NCAPGQ9BPX3 1015 aa16.81■□□□□ 0.28
ATG4B-206ENST00000405546 NARFQ9UHQ1 456 aa16.81■□□□□ 0.28
ATG4B-206ENST00000405546 KCNJ18B7U540 433 aa16.81■□□□□ 0.28
ATG4B-206ENST00000405546 KCNJ12Q14500 433 aa16.81■□□□□ 0.28
ATG4B-206ENST00000405546 PSMB7Q99436 277 aa16.81■□□□□ 0.28
ATG4B-206ENST00000405546 ADD3Q9UEY8 706 aaKnown RBP16.81■□□□□ 0.28
ATG4B-206ENST00000405546 LRP6O75581 1613 aa16.81■□□□□ 0.28
ATG4B-206ENST00000405546 SPATA31A5Q5VU36 1347 aa16.81■□□□□ 0.28
ATG4B-206ENST00000405546 FAM205AQ6ZU69 1335 aa16.81■□□□□ 0.28
ATG4B-206ENST00000405546 SPATA31A7Q8IWB4 1347 aa16.81■□□□□ 0.28
ATG4B-206ENST00000405546 KLRF2D3W0D1 207 aa16.81■□□□□ 0.28
ATG4B-206ENST00000405546 GGCXP38435 758 aa16.81■□□□□ 0.28
ATG4B-206ENST00000405546 PRCPP42785 496 aa16.81■□□□□ 0.28
ATG4B-206ENST00000405546 IL17AQ16552 155 aa16.81■□□□□ 0.28
ATG4B-206ENST00000405546 TADA2BQ86TJ2 420 aa16.81■□□□□ 0.28
ATG4B-206ENST00000405546 MYH15Q9Y2K3 1946 aa16.8■□□□□ 0.28
ATG4B-206ENST00000405546 ITGB4P16144 1822 aa16.8■□□□□ 0.28
ATG4B-206ENST00000405546 UFL1O94874 794 aa16.8■□□□□ 0.28
ATG4B-206ENST00000405546 TBX2Q13207 712 aaPredicted RBP16.8■□□□□ 0.28
ATG4B-206ENST00000405546 STIM1Q13586 685 aa16.8■□□□□ 0.28
ATG4B-206ENST00000405546 TMEM60Q9H2L4 133 aa16.8■□□□□ 0.28
ATG4B-206ENST00000405546 IL17RBQ9NRM6 502 aa16.8■□□□□ 0.28
ATG4B-206ENST00000405546 TCP11L1Q9NUJ3 509 aa16.8■□□□□ 0.28
ATG4B-206ENST00000405546 COL1A1P02452 1464 aaPredicted RBP16.8■□□□□ 0.28
ATG4B-206ENST00000405546 RNF225M0QZC1 329 aaPredicted RBP16.8■□□□□ 0.28
ATG4B-206ENST00000405546 RIMBP2O15034 1052 aa16.8■□□□□ 0.28
ATG4B-206ENST00000405546 GTPBP6O43824 516 aaPredicted RBP16.8■□□□□ 0.28
ATG4B-206ENST00000405546 ORC4O43929 436 aa16.8■□□□□ 0.28
ATG4B-206ENST00000405546 ERLIN2O94905 339 aa16.8■□□□□ 0.28
ATG4B-206ENST00000405546 TRAPPC3LQ5T215 181 aa16.8■□□□□ 0.28
ATG4B-206ENST00000405546 RCSD1Q6JBY9 416 aa16.8■□□□□ 0.28
ATG4B-206ENST00000405546 TYW1BQ6NUM6 668 aa16.8■□□□□ 0.28
ATG4B-206ENST00000405546 CNGA4Q8IV77 575 aa16.8■□□□□ 0.28
ATG4B-206ENST00000405546 TEX11Q8IYF3 940 aa16.8■□□□□ 0.28
ATG4B-206ENST00000405546 PCDHA4Q9UN74 947 aa16.8■□□□□ 0.28
ATG4B-206ENST00000405546 NPY5RQ15761 445 aa16.8■□□□□ 0.28
ATG4B-206ENST00000405546 CT47A1Q5JQC4 288 aaPredicted RBP16.8■□□□□ 0.28
ATG4B-206ENST00000405546 CNBD1Q8NA66 436 aa16.8■□□□□ 0.28
ATG4B-206ENST00000405546 CENPHQ9H3R5 247 aa16.8■□□□□ 0.28
ATG4B-206ENST00000405546 BIN2Q9UBW5 565 aaPredicted RBP16.8■□□□□ 0.28
ATG4B-206ENST00000405546 SEC63Q9UGP8 760 aaKnown RBP16.8■□□□□ 0.28
ATG4B-206ENST00000405546 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.8■□□□□ 0.28
ATG4B-206ENST00000405546 SEMA3EO15041 775 aa16.79■□□□□ 0.28
ATG4B-206ENST00000405546 PCP11498 1178 aaKnown RBP16.79■□□□□ 0.28
ATG4B-206ENST00000405546 TECP42680 631 aa16.79■□□□□ 0.28
ATG4B-206ENST00000405546 COPB1P53618 953 aaKnown RBP16.79■□□□□ 0.28
ATG4B-206ENST00000405546 FCHSD1Q86WN1 690 aa16.79■□□□□ 0.28
ATG4B-206ENST00000405546 WDR66Q8TBY9 1149 aa16.79■□□□□ 0.28
ATG4B-206ENST00000405546 FAM71BQ8TC56 605 aa16.79■□□□□ 0.28
ATG4B-206ENST00000405546 FAM107BQ9H098 131 aa16.79■□□□□ 0.28
ATG4B-206ENST00000405546 GEMIN8Q9NWZ8 242 aaKnown RBP16.79■□□□□ 0.28
ATG4B-206ENST00000405546 MYBL2P10244 700 aa16.79■□□□□ 0.28
ATG4B-206ENST00000405546 TXKP42681 527 aa16.79■□□□□ 0.28
ATG4B-206ENST00000405546 ASIC1P78348 528 aa16.79■□□□□ 0.28
ATG4B-206ENST00000405546 C12orf60Q5U649 245 aa16.79■□□□□ 0.28
ATG4B-206ENST00000405546 AMIGO3Q86WK7 504 aa16.79■□□□□ 0.28
ATG4B-206ENST00000405546 NAPGQ99747 312 aaPredicted RBP16.79■□□□□ 0.28
ATG4B-206ENST00000405546 RMND1Q9NWS8 449 aa16.79■□□□□ 0.28
ATG4B-206ENST00000405546 BAZ2AQ9UIF9 1905 aaKnown RBP16.79■□□□□ 0.28
ATG4B-206ENST00000405546 TAF1P21675 1872 aa16.78■□□□□ 0.28
ATG4B-206ENST00000405546 MYH3P11055 1940 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms