RNA–Protein interactions for RNA: ENST00000404694.3

CGREF1-205, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CGREF1, Length 1,376 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-205ENST00000404694 SNHG28P0DPA3 235 aa19.32■□□□□ 0.68
CGREF1-205ENST00000404694 ANAPC15P60006 121 aa19.32■□□□□ 0.68
CGREF1-205ENST00000404694 ZNF792Q3KQV3 632 aa19.32■□□□□ 0.68
CGREF1-205ENST00000404694 LHX8Q68G74 356 aa19.32■□□□□ 0.68
CGREF1-205ENST00000404694 TTBK2Q6IQ55 1244 aa19.32■□□□□ 0.68
CGREF1-205ENST00000404694 BTNL9Q6UXG8 535 aa19.32■□□□□ 0.68
CGREF1-205ENST00000404694 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.32■□□□□ 0.68
CGREF1-205ENST00000404694 ANKLE1Q8NAG6 615 aa19.32■□□□□ 0.68
CGREF1-205ENST00000404694 TRPV1Q8NER1 839 aa19.32■□□□□ 0.68
CGREF1-205ENST00000404694 ZSCAN10Q96SZ4 725 aaPredicted RBP19.32■□□□□ 0.68
CGREF1-205ENST00000404694 TNKSO95271 1327 aa19.31■□□□□ 0.68
CGREF1-205ENST00000404694 SLC16A2P36021 539 aa19.31■□□□□ 0.68
CGREF1-205ENST00000404694 SNAP25P60880 206 aa19.31■□□□□ 0.68
CGREF1-205ENST00000404694 ENAHQ8N8S7 591 aaPredicted RBP19.31■□□□□ 0.68
CGREF1-205ENST00000404694 CHST13Q8NET6 341 aa19.31■□□□□ 0.68
CGREF1-205ENST00000404694 DIS3LQ8TF46 1054 aaKnown RBP19.31■□□□□ 0.68
CGREF1-205ENST00000404694 ANKS1AQ92625 1134 aa19.31■□□□□ 0.68
CGREF1-205ENST00000404694 MAP4K1Q92918 833 aa19.31■□□□□ 0.68
CGREF1-205ENST00000404694 AGBL1Q96MI9 1066 aa19.31■□□□□ 0.68
CGREF1-205ENST00000404694 GPCPD1Q9NPB8 672 aa19.31■□□□□ 0.68
CGREF1-205ENST00000404694 HOMER2Q9NSB8 354 aa19.31■□□□□ 0.68
CGREF1-205ENST00000404694 FBXO40Q9UH90 709 aa19.31■□□□□ 0.68
CGREF1-205ENST00000404694 DIS3Q9Y2L1 958 aaKnown RBP19.31■□□□□ 0.68
CGREF1-205ENST00000404694 DNAJC25-GNG10A0A024R161 153 aa19.3■□□□□ 0.68
CGREF1-205ENST00000404694 MNX1P50219 401 aaPredicted RBP19.3■□□□□ 0.68
CGREF1-205ENST00000404694 ZNF543Q08ER8 600 aa19.3■□□□□ 0.68
CGREF1-205ENST00000404694 SYDE2Q5VT97 1194 aa19.3■□□□□ 0.68
CGREF1-205ENST00000404694 CCDC174Q6PII3 467 aa19.3■□□□□ 0.68
CGREF1-205ENST00000404694 PNMA1Q8ND90 353 aa19.3■□□□□ 0.68
CGREF1-205ENST00000404694 IL17RAQ96F46 866 aa19.3■□□□□ 0.68
CGREF1-205ENST00000404694 PAWRQ96IZ0 340 aaKnown RBP19.3■□□□□ 0.68
CGREF1-205ENST00000404694 RANBP17Q9H2T7 1088 aaKnown RBP19.3■□□□□ 0.68
CGREF1-205ENST00000404694 DDX20Q9UHI6 824 aaKnown RBP19.3■□□□□ 0.68
CGREF1-205ENST00000404694 TAF6LQ9Y6J9 622 aa19.3■□□□□ 0.68
CGREF1-205ENST00000404694 CNGA1P29973 690 aa19.29■□□□□ 0.68
CGREF1-205ENST00000404694 CYB5R4Q7L1T6 521 aa19.29■□□□□ 0.68
CGREF1-205ENST00000404694 DDX11Q96FC9 970 aa19.29■□□□□ 0.68
CGREF1-205ENST00000404694 UBAC1Q9BSL1 405 aa19.29■□□□□ 0.68
CGREF1-205ENST00000404694 HTATIP2Q9BUP3 242 aa19.29■□□□□ 0.68
CGREF1-205ENST00000404694 ACAD9Q9H845 621 aa19.29■□□□□ 0.68
CGREF1-205ENST00000404694 KAT14Q9H8E8 782 aa19.29■□□□□ 0.68
CGREF1-205ENST00000404694 RNF146Q9NTX7 359 aa19.29■□□□□ 0.68
CGREF1-205ENST00000404694 RBM8AQ9Y5S9 174 aaKnown RBP19.29■□□□□ 0.68
CGREF1-205ENST00000404694 SMCHD1A6NHR9 2005 aa19.28■□□□□ 0.68
CGREF1-205ENST00000404694 ALPK3Q96L96 1907 aa19.28■□□□□ 0.68
CGREF1-205ENST00000404694 MSCO60682 206 aa19.28■□□□□ 0.68
CGREF1-205ENST00000404694 HSPA4P34932 840 aa19.28■□□□□ 0.68
CGREF1-205ENST00000404694 TRDNQ13061 729 aa19.28■□□□□ 0.68
CGREF1-205ENST00000404694 TKFCQ3LXA3 575 aa19.28■□□□□ 0.68
CGREF1-205ENST00000404694 GPATCH4Q5T3I0 446 aaKnown RBP19.28■□□□□ 0.68
CGREF1-205ENST00000404694 NECAB2Q7Z6G3 386 aa19.28■□□□□ 0.68
CGREF1-205ENST00000404694 ANKRD35Q8N283 1001 aa19.28■□□□□ 0.68
CGREF1-205ENST00000404694 TINF2Q9BSI4 451 aa19.28■□□□□ 0.68
CGREF1-205ENST00000404694 DNAH12Q6ZR08 3092 aa19.27■□□□□ 0.68
CGREF1-205ENST00000404694 E7EWF7 191 aa19.27■□□□□ 0.68
CGREF1-205ENST00000404694 ALAS1P13196 640 aa19.27■□□□□ 0.68
CGREF1-205ENST00000404694 PRAMEF19Q5SWL8 479 aa19.27■□□□□ 0.68
CGREF1-205ENST00000404694 RNF20Q5VTR2 975 aa19.27■□□□□ 0.68
CGREF1-205ENST00000404694 STOX1Q6ZVD7 989 aa19.27■□□□□ 0.68
CGREF1-205ENST00000404694 CCPG1Q9ULG6 757 aa19.27■□□□□ 0.68
CGREF1-205ENST00000404694 SEPT4O43236 478 aa19.26■□□□□ 0.67
CGREF1-205ENST00000404694 ICAM1P05362 532 aa19.26■□□□□ 0.67
CGREF1-205ENST00000404694 GOLGA8HP0CJ92 632 aa19.26■□□□□ 0.67
CGREF1-205ENST00000404694 TAL1P17542 331 aaPredicted RBP19.26■□□□□ 0.67
CGREF1-205ENST00000404694 SEC23AQ15436 765 aa19.26■□□□□ 0.67
CGREF1-205ENST00000404694 IFIT1BQ5T764 474 aaKnown RBP19.26■□□□□ 0.67
CGREF1-205ENST00000404694 RALYLQ86SE5 291 aaKnown RBP19.26■□□□□ 0.67
CGREF1-205ENST00000404694 IPO9Q96P70 1041 aaKnown RBP19.26■□□□□ 0.67
CGREF1-205ENST00000404694 TRERF1Q96PN7 1200 aa19.26■□□□□ 0.67
CGREF1-205ENST00000404694 A1CFQ9NQ94 594 aaKnown RBP19.26■□□□□ 0.67
CGREF1-205ENST00000404694 NRBP1Q9UHY1 535 aa19.26■□□□□ 0.67
CGREF1-205ENST00000404694 MCM3APO60318 1980 aa19.25■□□□□ 0.67
CGREF1-205ENST00000404694 NECTIN1Q15223 517 aa19.25■□□□□ 0.67
CGREF1-205ENST00000404694 MUM1L1Q5H9M0 696 aa19.25■□□□□ 0.67
CGREF1-205ENST00000404694 MAMDC4Q6UXC1 1216 aa19.25■□□□□ 0.67
CGREF1-205ENST00000404694 ZNF467Q7Z7K2 595 aaPredicted RBP19.25■□□□□ 0.67
CGREF1-205ENST00000404694 MSL3Q8N5Y2 521 aaKnown RBP19.25■□□□□ 0.67
CGREF1-205ENST00000404694 NCOA7Q8NI08 942 aa19.25■□□□□ 0.67
CGREF1-205ENST00000404694 DPF3Q92784 378 aa19.25■□□□□ 0.67
CGREF1-205ENST00000404694 KCNB2Q92953 911 aa19.25■□□□□ 0.67
CGREF1-205ENST00000404694 FGD4Q96M96 766 aa19.25■□□□□ 0.67
CGREF1-205ENST00000404694 LCTP09848 1927 aa19.25■□□□□ 0.67
CGREF1-205ENST00000404694 SYNGAP1Q96PV0 1343 aa19.25■□□□□ 0.67
CGREF1-205ENST00000404694 ASPRV1Q53RT3 343 aa19.24■□□□□ 0.67
CGREF1-205ENST00000404694 CPVLQ9H3G5 476 aa19.24■□□□□ 0.67
CGREF1-205ENST00000404694 C11orf49Q9H6J7 331 aa19.24■□□□□ 0.67
CGREF1-205ENST00000404694 PFASO15067 1338 aa19.24■□□□□ 0.67
CGREF1-205ENST00000404694 CEP290O15078 2479 aa19.23■□□□□ 0.67
CGREF1-205ENST00000404694 RABEP1Q15276 862 aa19.23■□□□□ 0.67
CGREF1-205ENST00000404694 ANO1Q5XXA6 986 aa19.23■□□□□ 0.67
CGREF1-205ENST00000404694 FAM133AQ8N9E0 248 aa19.23■□□□□ 0.67
CGREF1-205ENST00000404694 POTEB2H3BUK9 544 aa19.22■□□□□ 0.67
CGREF1-205ENST00000404694 ZNF865P0CJ78 1059 aaPredicted RBP19.22■□□□□ 0.67
CGREF1-205ENST00000404694 COL6A1P12109 1028 aa19.22■□□□□ 0.67
CGREF1-205ENST00000404694 CNTN2Q02246 1040 aa19.22■□□□□ 0.67
CGREF1-205ENST00000404694 TSGA10IPQ3SY00 556 aa19.22■□□□□ 0.67
CGREF1-205ENST00000404694 MB21D2Q8IYB1 491 aaPredicted RBP19.22■□□□□ 0.67
CGREF1-205ENST00000404694 KIF2CQ99661 725 aa19.22■□□□□ 0.67
CGREF1-205ENST00000404694 UBA5Q9GZZ9 404 aa19.22■□□□□ 0.67
CGREF1-205ENST00000404694 CNPY2Q9Y2B0 182 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms