RNA–Protein interactions for RNA: ENST00000404354.3

SMC1B-202, Transcript of structural maintenance of chromosomes 1B, humanhuman

TSL 1 (best) BASIC

Gene SMC1B, Length 3,636 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-202ENST00000404354 UBA7P41226 1012 aa10.68□□□□□ -0.7
SMC1B-202ENST00000404354 KRT83P78385 493 aa10.68□□□□□ -0.7
SMC1B-202ENST00000404354 SPAG1Q07617 926 aa10.68□□□□□ -0.7
SMC1B-202ENST00000404354 TUBB2AQ13885 445 aa10.68□□□□□ -0.7
SMC1B-202ENST00000404354 FAM153CQ494X1 144 aa10.68□□□□□ -0.7
SMC1B-202ENST00000404354 CCDC70Q6NSX1 233 aa10.68□□□□□ -0.7
SMC1B-202ENST00000404354 FERMT2Q96AC1 680 aa10.68□□□□□ -0.7
SMC1B-202ENST00000404354 ZSCAN10Q96SZ4 725 aaPredicted RBP10.68□□□□□ -0.7
SMC1B-202ENST00000404354 TUBB2BQ9BVA1 445 aa10.68□□□□□ -0.7
SMC1B-202ENST00000404354 NOC4LQ9BVI4 516 aaKnown RBP10.68□□□□□ -0.7
SMC1B-202ENST00000404354 FAM153AQ9UHL3 310 aa10.68□□□□□ -0.7
SMC1B-202ENST00000404354 RIC1Q4ADV7 1423 aa10.68□□□□□ -0.7
SMC1B-202ENST00000404354 PUM3Q15397 648 aaKnown RBP10.68□□□□□ -0.7
SMC1B-202ENST00000404354 TTMPQ5BVD1 217 aa10.68□□□□□ -0.7
SMC1B-202ENST00000404354 SPATA4Q8NEY3 305 aa10.68□□□□□ -0.7
SMC1B-202ENST00000404354 IFIH1Q9BYX4 1025 aaKnown RBP10.68□□□□□ -0.7
SMC1B-202ENST00000404354 TMEM60Q9H2L4 133 aa10.68□□□□□ -0.7
SMC1B-202ENST00000404354 NLRC4Q9NPP4 1024 aa10.68□□□□□ -0.7
SMC1B-202ENST00000404354 TMOD3Q9NYL9 352 aa10.68□□□□□ -0.7
SMC1B-202ENST00000404354 BCCIPQ9P287 314 aaKnown RBP eCLIP10.68□□□□□ -0.7
SMC1B-202ENST00000404354 MYO1AQ9UBC5 1043 aa10.68□□□□□ -0.7
SMC1B-202ENST00000404354 LGALS16A8MUM7 142 aa10.67□□□□□ -0.7
SMC1B-202ENST00000404354 USP17L12C9JPN9 530 aa10.67□□□□□ -0.7
SMC1B-202ENST00000404354 USP17L21D6R901 530 aa10.67□□□□□ -0.7
SMC1B-202ENST00000404354 AARSP49588 968 aaKnown RBP eCLIP10.67□□□□□ -0.7
SMC1B-202ENST00000404354 INF2Q27J81 1249 aa10.67□□□□□ -0.7
SMC1B-202ENST00000404354 OTUD6BQ8N6M0 293 aa10.67□□□□□ -0.7
SMC1B-202ENST00000404354 VGLL2Q8N8G2 317 aa10.67□□□□□ -0.7
SMC1B-202ENST00000404354 LPIN2Q92539 896 aa10.67□□□□□ -0.7
SMC1B-202ENST00000404354 CCDC43Q96MW1 224 aaKnown RBP10.67□□□□□ -0.7
SMC1B-202ENST00000404354 RNF26Q9BY78 433 aaPredicted RBP10.67□□□□□ -0.7
SMC1B-202ENST00000404354 CD248Q9HCU0 757 aa10.67□□□□□ -0.7
SMC1B-202ENST00000404354 SLC39A2Q9NP94 309 aa10.67□□□□□ -0.7
SMC1B-202ENST00000404354 ITIH6Q6UXX5 1313 aa10.67□□□□□ -0.7
SMC1B-202ENST00000404354 C4AP0C0L4 1744 aa10.67□□□□□ -0.7
SMC1B-202ENST00000404354 C4BP0C0L5 1744 aa10.67□□□□□ -0.7
SMC1B-202ENST00000404354 MST1RQ04912 1400 aa10.67□□□□□ -0.7
SMC1B-202ENST00000404354 LRRC10BA6NIK2 292 aa10.67□□□□□ -0.7
SMC1B-202ENST00000404354 CYP2D6P10635 497 aa10.67□□□□□ -0.7
SMC1B-202ENST00000404354 SLC5A1P13866 664 aa10.67□□□□□ -0.7
SMC1B-202ENST00000404354 CARSP49589 748 aaKnown RBP10.67□□□□□ -0.7
SMC1B-202ENST00000404354 RASSF7Q02833 373 aa10.67□□□□□ -0.7
SMC1B-202ENST00000404354 CKAP4Q07065 602 aaKnown RBP10.67□□□□□ -0.7
SMC1B-202ENST00000404354 KCNV1Q6PIU1 500 aa10.67□□□□□ -0.7
SMC1B-202ENST00000404354 STAG1Q8WVM7 1258 aa10.67□□□□□ -0.7
SMC1B-202ENST00000404354 TANGO6Q9C0B7 1094 aa10.67□□□□□ -0.7
SMC1B-202ENST00000404354 PPANQ9NQ55 473 aaKnown RBP10.67□□□□□ -0.7
SMC1B-202ENST00000404354 SALL4Q9UJQ4 1053 aa10.67□□□□□ -0.7
SMC1B-202ENST00000404354 FAM184BQ9ULE4 1060 aa10.67□□□□□ -0.7
SMC1B-202ENST00000404354 FAM205AQ6ZU69 1335 aa10.67□□□□□ -0.7
SMC1B-202ENST00000404354 RASSF10A6NK89 507 aa10.67□□□□□ -0.7
SMC1B-202ENST00000404354 UQCRFS1P1P0C7P4 283 aa10.67□□□□□ -0.7
SMC1B-202ENST00000404354 ATP2C1P98194 919 aaPredicted RBP10.67□□□□□ -0.7
SMC1B-202ENST00000404354 GUCY2DQ02846 1103 aa10.67□□□□□ -0.7
SMC1B-202ENST00000404354 PDE4DQ08499 809 aa10.67□□□□□ -0.7
SMC1B-202ENST00000404354 STK4Q13043 487 aa10.67□□□□□ -0.7
SMC1B-202ENST00000404354 NNTQ13423 1086 aa10.67□□□□□ -0.7
SMC1B-202ENST00000404354 NPY5RQ15761 445 aa10.67□□□□□ -0.7
SMC1B-202ENST00000404354 PAPD7Q5XG87 772 aaKnown RBP10.67□□□□□ -0.7
SMC1B-202ENST00000404354 ANKRD40Q6AI12 368 aa10.67□□□□□ -0.7
SMC1B-202ENST00000404354 RRAGAQ7L523 313 aa10.67□□□□□ -0.7
SMC1B-202ENST00000404354 CREG2Q8IUH2 290 aa10.67□□□□□ -0.7
SMC1B-202ENST00000404354 FAM212AQ96EL1 285 aa10.67□□□□□ -0.7
SMC1B-202ENST00000404354 CNOT6LQ96LI5 555 aaKnown RBP10.67□□□□□ -0.7
SMC1B-202ENST00000404354 GOLPH3Q9H4A6 298 aa10.67□□□□□ -0.7
SMC1B-202ENST00000404354 RBM12Q9NTZ6 932 aaKnown RBP10.67□□□□□ -0.7
SMC1B-202ENST00000404354 ZBTB1Q9Y2K1 713 aa10.67□□□□□ -0.7
SMC1B-202ENST00000404354 H7C1D1 291 aa10.66□□□□□ -0.7
SMC1B-202ENST00000404354 PSMA7O14818 248 aa10.66□□□□□ -0.7
SMC1B-202ENST00000404354 FTCDO95954 541 aa10.66□□□□□ -0.7
SMC1B-202ENST00000404354 EIF4A3P38919 411 aaKnown RBP10.66□□□□□ -0.7
SMC1B-202ENST00000404354 ASIC1P78348 528 aa10.66□□□□□ -0.7
SMC1B-202ENST00000404354 GFPT1Q06210 699 aaPredicted RBP10.66□□□□□ -0.7
SMC1B-202ENST00000404354 ACTN3Q08043 901 aaPredicted RBP10.66□□□□□ -0.7
SMC1B-202ENST00000404354 PPFIA1Q13136 1202 aa10.66□□□□□ -0.7
SMC1B-202ENST00000404354 TDRD12Q587J7 1177 aaKnown RBP10.66□□□□□ -0.7
SMC1B-202ENST00000404354 MCTP2Q6DN12 878 aa10.66□□□□□ -0.7
SMC1B-202ENST00000404354 DYMQ7RTS9 669 aa10.66□□□□□ -0.7
SMC1B-202ENST00000404354 IQCA1Q86XH1 822 aa10.66□□□□□ -0.7
SMC1B-202ENST00000404354 ELOA2Q8IYF1 753 aaPredicted RBP10.66□□□□□ -0.7
SMC1B-202ENST00000404354 OR2W6PQ8NHA6 318 aa10.66□□□□□ -0.7
SMC1B-202ENST00000404354 LRRC15Q8TF66 581 aa10.66□□□□□ -0.7
SMC1B-202ENST00000404354 ZIM3Q96PE6 472 aa10.66□□□□□ -0.7
SMC1B-202ENST00000404354 EXOC1Q9NV70 894 aa10.66□□□□□ -0.7
SMC1B-202ENST00000404354 CAPN11Q9UMQ6 739 aa10.66□□□□□ -0.7
SMC1B-202ENST00000404354 ARFGEF2Q9Y6D5 1785 aa10.66□□□□□ -0.7
SMC1B-202ENST00000404354 TULP1O00294 542 aaPredicted RBP10.66□□□□□ -0.7
SMC1B-202ENST00000404354 EIF3HO15372 352 aaKnown RBP eCLIP10.66□□□□□ -0.7
SMC1B-202ENST00000404354 HSF2BPO75031 334 aa10.66□□□□□ -0.7
SMC1B-202ENST00000404354 KIAA0754O94854 1291 aa10.66□□□□□ -0.7
SMC1B-202ENST00000404354 IFT88Q13099 833 aa10.66□□□□□ -0.7
SMC1B-202ENST00000404354 SEC23AQ15436 765 aa10.66□□□□□ -0.7
SMC1B-202ENST00000404354 MAATS1Q7Z4T9 603 aa10.66□□□□□ -0.7
SMC1B-202ENST00000404354 KLHL7Q8IXQ5 586 aa10.66□□□□□ -0.7
SMC1B-202ENST00000404354 ADSSL1Q8N142 457 aa10.66□□□□□ -0.7
SMC1B-202ENST00000404354 VIPAS39Q9H9C1 493 aa10.66□□□□□ -0.7
SMC1B-202ENST00000404354 EPB41L5Q9HCM4 733 aa10.66□□□□□ -0.7
SMC1B-202ENST00000404354 MYH13Q9UKX3 1938 aa10.66□□□□□ -0.7
SMC1B-202ENST00000404354 MAGEB6P1A0A0J9YX57 407 aa10.66□□□□□ -0.7
SMC1B-202ENST00000404354 NUTM2BA6NNL0 878 aaPredicted RBP10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms