RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 C7orf31Q8N865 590 aa15.12■□□□□ 0.01
VAPA-202ENST00000400000 DDX41Q9UJV9 622 aaKnown RBP15.12■□□□□ 0.01
VAPA-202ENST00000400000 ASAP1Q9ULH1 1129 aa15.12■□□□□ 0.01
VAPA-202ENST00000400000 GBP1P32455 592 aa15.12■□□□□ 0.01
VAPA-202ENST00000400000 DYNLL1P63167 89 aaKnown RBP15.12■□□□□ 0.01
VAPA-202ENST00000400000 SRGAP1Q7Z6B7 1085 aa15.12■□□□□ 0.01
VAPA-202ENST00000400000 RPRD2Q5VT52 1461 aaKnown RBP15.11■□□□□ 0.01
VAPA-202ENST00000400000 KCNJ18B7U540 433 aa15.11■□□□□ 0.01
VAPA-202ENST00000400000 XRCC5P13010 732 aaKnown RBP15.11■□□□□ 0.01
VAPA-202ENST00000400000 MORC3Q14149 939 aa15.11■□□□□ 0.01
VAPA-202ENST00000400000 KCNJ12Q14500 433 aa15.11■□□□□ 0.01
VAPA-202ENST00000400000 KRT71Q3SY84 523 aa15.11■□□□□ 0.01
VAPA-202ENST00000400000 PI4K2BQ8TCG2 481 aa15.11■□□□□ 0.01
VAPA-202ENST00000400000 RSRC1Q96IZ7 334 aaKnown RBP15.11■□□□□ 0.01
VAPA-202ENST00000400000 TRIM56Q9BRZ2 755 aaKnown RBP15.11■□□□□ 0.01
VAPA-202ENST00000400000 TMEM191BP0C7N4 346 aa15.11■□□□□ 0.01
VAPA-202ENST00000400000 RXRBP28702 533 aa15.11■□□□□ 0.01
VAPA-202ENST00000400000 CDC26Q8NHZ8 85 aa15.11■□□□□ 0.01
VAPA-202ENST00000400000 UBN1Q9NPG3 1134 aa15.11■□□□□ 0.01
VAPA-202ENST00000400000 A0A0D9SFI3 127 aa15.11■□□□□ 0.01
VAPA-202ENST00000400000 NEURL1BA8MQ27 555 aa15.11■□□□□ 0.01
VAPA-202ENST00000400000 DMP1Q13316 513 aaPredicted RBP15.11■□□□□ 0.01
VAPA-202ENST00000400000 LRRC41Q15345 812 aa15.11■□□□□ 0.01
VAPA-202ENST00000400000 CSRNP1Q96S65 589 aa15.11■□□□□ 0.01
VAPA-202ENST00000400000 AMFRQ9UKV5 643 aa15.11■□□□□ 0.01
VAPA-202ENST00000400000 PCDHB4Q9Y5E5 795 aa15.11■□□□□ 0.01
VAPA-202ENST00000400000 KLRF2D3W0D1 207 aa15.11■□□□□ 0.01
VAPA-202ENST00000400000 H7C0C1 242 aa15.11■□□□□ 0.01
VAPA-202ENST00000400000 ATP5OP48047 213 aa15.11■□□□□ 0.01
VAPA-202ENST00000400000 PALD1Q9ULE6 856 aa15.11■□□□□ 0.01
VAPA-202ENST00000400000 FAM196AQ6ZSG2 479 aa15.11■□□□□ 0.01
VAPA-202ENST00000400000 SMYD4Q8IYR2 804 aaPredicted RBP15.11■□□□□ 0.01
VAPA-202ENST00000400000 IFNL3Q8IZI9 196 aa15.11■□□□□ 0.01
VAPA-202ENST00000400000 NUCKS1Q9H1E3 243 aaKnown RBP15.11■□□□□ 0.01
VAPA-202ENST00000400000 GREM2Q9H772 168 aa15.11■□□□□ 0.01
VAPA-202ENST00000400000 GPATCH8Q9UKJ3 1502 aaKnown RBP15.1■□□□□ 0.01
VAPA-202ENST00000400000 CLIC2O15247 247 aa15.1■□□□□ 0.01
VAPA-202ENST00000400000 CHURC1Q8WUH1 139 aa15.1■□□□□ 0.01
VAPA-202ENST00000400000 ADPGKQ9BRR6 497 aa15.1■□□□□ 0.01
VAPA-202ENST00000400000 KRIT1O00522 736 aa15.1■□□□□ 0.01
VAPA-202ENST00000400000 MYSM1Q5VVJ2 828 aa15.1■□□□□ 0.01
VAPA-202ENST00000400000 TAOK1Q7L7X3 1001 aa15.1■□□□□ 0.01
VAPA-202ENST00000400000 ARFGAP2Q8N6H7 521 aa15.1■□□□□ 0.01
VAPA-202ENST00000400000 LAMC3Q9Y6N6 1575 aa15.1■□□□□ 0.01
VAPA-202ENST00000400000 FAM178BQ8IXR5 827 aa15.1■□□□□ 0.01
VAPA-202ENST00000400000 PUS3Q9BZE2 481 aaKnown RBP15.1■□□□□ 0.01
VAPA-202ENST00000400000 XPO4Q9C0E2 1151 aaKnown RBP15.1■□□□□ 0.01
VAPA-202ENST00000400000 POC1B-GALNT4F8VUJ3 575 aa15.1■□□□□ 0.01
VAPA-202ENST00000400000 JADE1Q6IE81 842 aa15.1■□□□□ 0.01
VAPA-202ENST00000400000 BLIDQ8IZY5 108 aa15.1■□□□□ 0.01
VAPA-202ENST00000400000 BANK1Q8NDB2 785 aa15.1■□□□□ 0.01
VAPA-202ENST00000400000 GANCQ8TET4 914 aa15.1■□□□□ 0.01
VAPA-202ENST00000400000 RAD50Q92878 1312 aa15.1■□□□□ 0.01
VAPA-202ENST00000400000 BRD3Q15059 726 aa15.1■□□□□ 0.01
VAPA-202ENST00000400000 ABCB5Q2M3G0 1257 aa15.1■□□□□ 0.01
VAPA-202ENST00000400000 SCARA5Q6ZMJ2 495 aa15.1■□□□□ 0.01
VAPA-202ENST00000400000 RFX6Q8HWS3 928 aa15.1■□□□□ 0.01
VAPA-202ENST00000400000 PNMA1Q8ND90 353 aa15.1■□□□□ 0.01
VAPA-202ENST00000400000 VCX3BQ9H321 246 aa15.1■□□□□ 0.01
VAPA-202ENST00000400000 TSR3Q9UJK0 312 aaKnown RBP15.1■□□□□ 0.01
VAPA-202ENST00000400000 NUB1Q9Y5A7 615 aa15.1■□□□□ 0.01
VAPA-202ENST00000400000 CRKLP46109 303 aaKnown RBP15.09■□□□□ 0.01
VAPA-202ENST00000400000 PDE6CP51160 858 aa15.09■□□□□ 0.01
VAPA-202ENST00000400000 PPP4R1Q8TF05 950 aa15.09■□□□□ 0.01
VAPA-202ENST00000400000 SWAP70Q9UH65 585 aa15.09■□□□□ 0.01
VAPA-202ENST00000400000 CLIC4Q9Y696 253 aa15.09■□□□□ 0.01
VAPA-202ENST00000400000 IL13P35225 146 aa15.09■□□□□ 0.01
VAPA-202ENST00000400000 CACNA2D3Q8IZS8 1091 aa15.09■□□□□ 0.01
VAPA-202ENST00000400000 TRIM14Q14142 442 aa15.09■□□□□ 0.01
VAPA-202ENST00000400000 IBTKQ9P2D0 1353 aaPredicted RBP15.09■□□□□ 0.01
VAPA-202ENST00000400000 DUOX2Q9NRD8 1548 aa15.09■□□□□ 0.01
VAPA-202ENST00000400000 TNFAIP1Q13829 316 aa15.09■□□□□ 0.01
VAPA-202ENST00000400000 NLRP7Q8WX94 980 aa15.09■□□□□ 0.01
VAPA-202ENST00000400000 XPAP23025 273 aaPredicted RBP15.09■□□□□ 0.01
VAPA-202ENST00000400000 STX2P32856 288 aa15.09■□□□□ 0.01
VAPA-202ENST00000400000 STAT1P42224 750 aa15.09■□□□□ 0.01
VAPA-202ENST00000400000 CFAP221Q4G0U5 840 aa15.09■□□□□ 0.01
VAPA-202ENST00000400000 NUP58Q9BVL2 599 aa15.09■□□□□ 0.01
VAPA-202ENST00000400000 TEKT3Q9BXF9 490 aa15.09■□□□□ 0.01
VAPA-202ENST00000400000 C1orf112Q9NSG2 853 aa15.09■□□□□ 0.01
VAPA-202ENST00000400000 MOSPD1Q9UJG1 213 aa15.09■□□□□ 0.01
VAPA-202ENST00000400000 THAP12O43422 761 aa15.09■□□□□ 0.01
VAPA-202ENST00000400000 LRRN2O75325 713 aa15.09■□□□□ 0.01
VAPA-202ENST00000400000 ERFEQ4G0M1 354 aa15.09■□□□□ 0.01
VAPA-202ENST00000400000 SMC5Q8IY18 1101 aa15.09■□□□□ 0.01
VAPA-202ENST00000400000 MYOCDQ8IZQ8 938 aa15.09■□□□□ 0.01
VAPA-202ENST00000400000 GABPB2Q8TAK5 448 aaPredicted RBP15.09■□□□□ 0.01
VAPA-202ENST00000400000 ZNF518AQ6AHZ1 1483 aa15.08■□□□□ 0.01
VAPA-202ENST00000400000 GOLGA8SH3BPF8 625 aa15.08■□□□□ 0.01
VAPA-202ENST00000400000 SGK1O00141 431 aa15.08■□□□□ 0.01
VAPA-202ENST00000400000 PABPC4Q13310 644 aaKnown RBP eCLIP15.08■□□□□ 0.016e-34■■□□□ 12.4
VAPA-202ENST00000400000 G3BP2Q9UN86 482 aaKnown RBP15.08■□□□□ 0.01
VAPA-202ENST00000400000 KIAA1024Q9UPX6 916 aa15.08■□□□□ 0.01
VAPA-202ENST00000400000 SYNDIG1LA6NDD5 238 aa15.08■□□□□ 0
VAPA-202ENST00000400000 F5H423 210 aaPredicted RBP15.08■□□□□ 0
VAPA-202ENST00000400000 INO80B-WBP1J3KQ70 363 aa15.08■□□□□ 0
VAPA-202ENST00000400000 PFKFB1P16118 471 aa15.08■□□□□ 0
VAPA-202ENST00000400000 SLFN13Q68D06 897 aa15.08■□□□□ 0
VAPA-202ENST00000400000 INO80BQ9C086 356 aaPredicted RBP15.08■□□□□ 0
VAPA-202ENST00000400000 MRPL46Q9H2W6 279 aaKnown RBP15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms