RNA–Protein interactions for RNA: ENST00000399516.7

LAMA3-203, Transcript of laminin subunit alpha 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA3, Length 9,834 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-203ENST00000399516 LSG1Q9H089 658 aaKnown RBP12.33□□□□□ -0.44
LAMA3-203ENST00000399516 GGA1Q9UJY5 639 aa12.33□□□□□ -0.44
LAMA3-203ENST00000399516 GAS7O60861 476 aa12.33□□□□□ -0.44
LAMA3-203ENST00000399516 OR52Z1P0C646 297 aa12.33□□□□□ -0.44
LAMA3-203ENST00000399516 GOLGA8FQ08AF8 430 aa12.33□□□□□ -0.44
LAMA3-203ENST00000399516 GOLGA8DPQ0D2H9 430 aa12.33□□□□□ -0.44
LAMA3-203ENST00000399516 SCRN1Q12765 414 aa12.33□□□□□ -0.44
LAMA3-203ENST00000399516 ADAT2Q7Z6V5 191 aaKnown RBP12.33□□□□□ -0.44
LAMA3-203ENST00000399516 C1orf112Q9NSG2 853 aa12.33□□□□□ -0.44
LAMA3-203ENST00000399516 IL9RQ01113 521 aa12.33□□□□□ -0.44
LAMA3-203ENST00000399516 RASSF7Q02833 373 aa12.33□□□□□ -0.44
LAMA3-203ENST00000399516 PPP2R5CQ13362 524 aa12.33□□□□□ -0.44
LAMA3-203ENST00000399516 PICK1Q9NRD5 415 aa12.33□□□□□ -0.44
LAMA3-203ENST00000399516 TTLL3Q9Y4R7 772 aa12.33□□□□□ -0.44
LAMA3-203ENST00000399516 CLIC6Q96NY7 704 aa12.32□□□□□ -0.44
LAMA3-203ENST00000399516 FAF1Q9UNN5 650 aaPredicted RBP12.32□□□□□ -0.44
LAMA3-203ENST00000399516 ENC1O14682 589 aa12.32□□□□□ -0.44
LAMA3-203ENST00000399516 SMIM24O75264 130 aa12.32□□□□□ -0.44
LAMA3-203ENST00000399516 POLR2FP61218 127 aaKnown RBP12.32□□□□□ -0.44
LAMA3-203ENST00000399516 SLC35F6Q8N357 371 aa12.32□□□□□ -0.44
LAMA3-203ENST00000399516 DDAH1O94760 285 aa12.32□□□□□ -0.44
LAMA3-203ENST00000399516 FAM47AQ5JRC9 791 aa12.32□□□□□ -0.44
LAMA3-203ENST00000399516 MAPKAPK5Q8IW41 473 aa12.32□□□□□ -0.44
LAMA3-203ENST00000399516 GPKOWQ92917 476 aaPredicted RBP eCLIP12.32□□□□□ -0.44
LAMA3-203ENST00000399516 CHAMP1Q96JM3 812 aa12.32□□□□□ -0.44
LAMA3-203ENST00000399516 THEGQ9P2T0 379 aa12.32□□□□□ -0.44
LAMA3-203ENST00000399516 K7ENM7 598 aa12.32□□□□□ -0.44
LAMA3-203ENST00000399516 KSR1Q8IVT5 923 aa12.32□□□□□ -0.44
LAMA3-203ENST00000399516 SSH3Q8TE77 659 aa12.32□□□□□ -0.44
LAMA3-203ENST00000399516 POLR3EQ9NVU0 708 aa12.32□□□□□ -0.44
LAMA3-203ENST00000399516 PCDHB13Q9Y5F0 798 aa12.32□□□□□ -0.44
LAMA3-203ENST00000399516 RBM26Q5T8P6 1007 aaKnown RBP12.32□□□□□ -0.44
LAMA3-203ENST00000399516 CAPN12Q6ZSI9 719 aa12.32□□□□□ -0.44
LAMA3-203ENST00000399516 TGFBRAP1Q8WUH2 860 aa12.32□□□□□ -0.44
LAMA3-203ENST00000399516 CNOT10Q9H9A5 744 aaKnown RBP12.32□□□□□ -0.44
LAMA3-203ENST00000399516 AFG3L2Q9Y4W6 797 aa12.32□□□□□ -0.44
LAMA3-203ENST00000399516 ABCC12Q96J65 1359 aa12.32□□□□□ -0.44
LAMA3-203ENST00000399516 VPS41P49754 854 aa12.32□□□□□ -0.44
LAMA3-203ENST00000399516 CMTR1Q8N1G2 835 aaKnown RBP12.32□□□□□ -0.44
LAMA3-203ENST00000399516 JDP2Q8WYK2 163 aa12.32□□□□□ -0.44
LAMA3-203ENST00000399516 BZW2Q9Y6E2 419 aaKnown RBP12.32□□□□□ -0.44
LAMA3-203ENST00000399516 IKBKBO14920 756 aa12.31□□□□□ -0.44
LAMA3-203ENST00000399516 PRPF6O94906 941 aaKnown RBP12.31□□□□□ -0.44
LAMA3-203ENST00000399516 GCP02774 474 aa12.31□□□□□ -0.44
LAMA3-203ENST00000399516 LMNB1P20700 586 aa12.31□□□□□ -0.44
LAMA3-203ENST00000399516 TECP42680 631 aa12.31□□□□□ -0.44
LAMA3-203ENST00000399516 ARMC9Q7Z3E5 817 aa12.31□□□□□ -0.44
LAMA3-203ENST00000399516 HAUS1Q96CS2 278 aa12.31□□□□□ -0.44
LAMA3-203ENST00000399516 TXLNGQ9NUQ3 528 aa12.31□□□□□ -0.44
LAMA3-203ENST00000399516 MYO5CQ9NQX4 1742 aa12.31□□□□□ -0.44
LAMA3-203ENST00000399516 EEF1GP26641 437 aaKnown RBP12.31□□□□□ -0.44
LAMA3-203ENST00000399516 CLCN6P51797 869 aa12.31□□□□□ -0.44
LAMA3-203ENST00000399516 CUL4BQ13620 913 aa12.31□□□□□ -0.44
LAMA3-203ENST00000399516 SLFN12Q8IYM2 578 aa12.31□□□□□ -0.44
LAMA3-203ENST00000399516 NSMCE1Q8WV22 266 aa12.31□□□□□ -0.44
LAMA3-203ENST00000399516 CNOT6LQ96LI5 555 aaKnown RBP12.31□□□□□ -0.44
LAMA3-203ENST00000399516 HSPD1P10809 573 aaKnown RBP12.31□□□□□ -0.44
LAMA3-203ENST00000399516 KRT3P12035 628 aa12.31□□□□□ -0.44
LAMA3-203ENST00000399516 SCG2P13521 617 aa12.31□□□□□ -0.44
LAMA3-203ENST00000399516 RBL2Q08999 1139 aa12.31□□□□□ -0.44
LAMA3-203ENST00000399516 DPCR1Q3MIW9 517 aa12.31□□□□□ -0.44
LAMA3-203ENST00000399516 MIER3Q7Z3K6 550 aa12.31□□□□□ -0.44
LAMA3-203ENST00000399516 IWS1Q96ST2 819 aa12.31□□□□□ -0.44
LAMA3-203ENST00000399516 AZI2Q9H6S1 392 aa12.31□□□□□ -0.44
LAMA3-203ENST00000399516 C2orf54Q08AI8 447 aa12.31□□□□□ -0.44
LAMA3-203ENST00000399516 TRIM50Q86XT4 487 aa12.31□□□□□ -0.44
LAMA3-203ENST00000399516 EXOC4Q96A65 974 aa12.31□□□□□ -0.44
LAMA3-203ENST00000399516 PTPN22Q9Y2R2 807 aa12.31□□□□□ -0.44
LAMA3-203ENST00000399516 SART1O43290 800 aaKnown RBP12.31□□□□□ -0.44
LAMA3-203ENST00000399516 RBBP5Q15291 538 aaKnown RBP12.31□□□□□ -0.44
LAMA3-203ENST00000399516 CCDC93Q567U6 631 aa12.31□□□□□ -0.44
LAMA3-203ENST00000399516 SLC39A2Q9NP94 309 aa12.31□□□□□ -0.44
LAMA3-203ENST00000399516 DDX25Q9UHL0 483 aaKnown RBP12.31□□□□□ -0.44
LAMA3-203ENST00000399516 PRR16Q569H4 304 aa12.31□□□□□ -0.44
LAMA3-203ENST00000399516 FAM102BQ5T8I3 360 aa12.31□□□□□ -0.44
LAMA3-203ENST00000399516 HEXIM1O94992 359 aaKnown RBP12.3□□□□□ -0.44
LAMA3-203ENST00000399516 LONP1P36776 959 aaKnown RBP12.3□□□□□ -0.44
LAMA3-203ENST00000399516 GALNT17Q6IS24 598 aa12.3□□□□□ -0.44
LAMA3-203ENST00000399516 NCKAP5LQ9HCH0 1330 aa12.3□□□□□ -0.44
LAMA3-203ENST00000399516 FANCBQ8NB91 859 aa12.3□□□□□ -0.44
LAMA3-203ENST00000399516 HINFPQ9BQA5 517 aa12.3□□□□□ -0.44
LAMA3-203ENST00000399516 TMOD4Q9NZQ9 345 aa12.3□□□□□ -0.44
LAMA3-203ENST00000399516 INTS9Q9NV88 658 aaKnown RBP12.3□□□□□ -0.44
LAMA3-203ENST00000399516 SEPT10Q9P0V9 454 aa12.3□□□□□ -0.44
LAMA3-203ENST00000399516 RNASELQ05823 741 aaKnown RBP12.3□□□□□ -0.44
LAMA3-203ENST00000399516 LGR6Q9HBX8 967 aa12.3□□□□□ -0.44
LAMA3-203ENST00000399516 TFAP4Q01664 338 aa12.3□□□□□ -0.44
LAMA3-203ENST00000399516 SPZ1Q9BXG8 430 aa12.3□□□□□ -0.44
LAMA3-203ENST00000399516 TTC37Q6PGP7 1564 aa12.3□□□□□ -0.44
LAMA3-203ENST00000399516 ZMYND10O75800 440 aa12.3□□□□□ -0.44
LAMA3-203ENST00000399516 CFBP00751 764 aa12.3□□□□□ -0.44
LAMA3-203ENST00000399516 RPS6KA2Q15349 733 aa12.3□□□□□ -0.44
LAMA3-203ENST00000399516 HSP90AA5PQ58FG0 334 aa12.29□□□□□ -0.44
LAMA3-203ENST00000399516 IFNAR2P48551 515 aa12.29□□□□□ -0.44
LAMA3-203ENST00000399516 CTSWP56202 376 aa12.29□□□□□ -0.44
LAMA3-203ENST00000399516 JADE1Q6IE81 842 aa12.29□□□□□ -0.44
LAMA3-203ENST00000399516 NEK8Q86SG6 692 aa12.29□□□□□ -0.44
LAMA3-203ENST00000399516 SDCCAG3Q96C92 435 aa12.29□□□□□ -0.44
LAMA3-203ENST00000399516 ATP8A2Q9NTI2 1148 aa12.29□□□□□ -0.44
LAMA3-203ENST00000399516 SHROOM2Q13796 1616 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms