RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 TBC1D8BQ0IIM8 1120 aa8.79□□□□□ -1
USP47-203ENST00000399455 BEND3Q5T5X7 828 aa8.79□□□□□ -1
USP47-203ENST00000399455 MAATS1Q7Z4T9 603 aa8.79□□□□□ -1
USP47-203ENST00000399455 GPR161Q8N6U8 529 aaKnown RBP8.79□□□□□ -1
USP47-203ENST00000399455 OTUD5Q96G74 571 aa8.79□□□□□ -1
USP47-203ENST00000399455 NUP58Q9BVL2 599 aa8.79□□□□□ -1
USP47-203ENST00000399455 LMCD1Q9NZU5 365 aa8.79□□□□□ -1
USP47-203ENST00000399455 ANKFY1Q9P2R3 1169 aa8.79□□□□□ -1
USP47-203ENST00000399455 SPATA31A5Q5VU36 1347 aa8.79□□□□□ -1
USP47-203ENST00000399455 SPATA31A7Q8IWB4 1347 aa8.79□□□□□ -1
USP47-203ENST00000399455 E7EWF7 191 aa8.79□□□□□ -1
USP47-203ENST00000399455 HSF2BPO75031 334 aa8.79□□□□□ -1
USP47-203ENST00000399455 SURF1Q15526 300 aa8.79□□□□□ -1
USP47-203ENST00000399455 LRRC24Q50LG9 513 aa8.79□□□□□ -1
USP47-203ENST00000399455 YAF2Q8IY57 180 aa8.79□□□□□ -1
USP47-203ENST00000399455 CEP63Q96MT8 703 aa8.79□□□□□ -1
USP47-203ENST00000399455 FRMPD1Q5SYB0 1578 aa8.79□□□□□ -1
USP47-203ENST00000399455 GIPC1O14908 333 aa8.79□□□□□ -1
USP47-203ENST00000399455 KRT81Q14533 505 aa8.79□□□□□ -1
USP47-203ENST00000399455 ANO1Q5XXA6 986 aa8.79□□□□□ -1
USP47-203ENST00000399455 DIS3L2Q8IYB7 885 aaKnown RBP8.79□□□□□ -1
USP47-203ENST00000399455 IQCDQ96DY2 449 aa8.79□□□□□ -1
USP47-203ENST00000399455 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.79□□□□□ -1
USP47-203ENST00000399455 CETPP11597 493 aa8.79□□□□□ -1
USP47-203ENST00000399455 MYO1EQ12965 1108 aa8.79□□□□□ -1
USP47-203ENST00000399455 STXBP2Q15833 593 aa8.79□□□□□ -1
USP47-203ENST00000399455 KCTD1Q719H9 257 aa8.79□□□□□ -1
USP47-203ENST00000399455 C1orf112Q9NSG2 853 aa8.79□□□□□ -1
USP47-203ENST00000399455 USP17L10C9JJH3 530 aa8.78□□□□□ -1
USP47-203ENST00000399455 LAD1O00515 517 aa8.78□□□□□ -1
USP47-203ENST00000399455 ARMCX5Q6P1M9 558 aa8.78□□□□□ -1
USP47-203ENST00000399455 CRAMP1Q96RY5 1269 aa8.78□□□□□ -1
USP47-203ENST00000399455 CELF2O95319 508 aaKnown RBP8.78□□□□□ -1
USP47-203ENST00000399455 CIITAP33076 1130 aa8.78□□□□□ -1
USP47-203ENST00000399455 PHKA1P46020 1223 aa8.78□□□□□ -1
USP47-203ENST00000399455 NUDT18Q6ZVK8 323 aa8.78□□□□□ -1
USP47-203ENST00000399455 LEO1Q8WVC0 666 aaPredicted RBP8.78□□□□□ -1
USP47-203ENST00000399455 FAM81BQ96LP2 452 aa8.78□□□□□ -1
USP47-203ENST00000399455 DIP2CQ9Y2E4 1556 aa8.78□□□□□ -1
USP47-203ENST00000399455 TFRCP02786 760 aaKnown RBP8.78□□□□□ -1
USP47-203ENST00000399455 ACTN1P12814 892 aa8.78□□□□□ -1
USP47-203ENST00000399455 SCG2P13521 617 aa8.78□□□□□ -1
USP47-203ENST00000399455 MMP14P50281 582 aa8.78□□□□□ -1
USP47-203ENST00000399455 TMCO3Q6UWJ1 677 aa8.78□□□□□ -1
USP47-203ENST00000399455 TAOK1Q7L7X3 1001 aa8.78□□□□□ -1
USP47-203ENST00000399455 MICALL2Q8IY33 904 aa8.78□□□□□ -1
USP47-203ENST00000399455 KATNAL1Q9BW62 490 aa8.78□□□□□ -1
USP47-203ENST00000399455 MTRF1LQ9UGC7 380 aaKnown RBP8.78□□□□□ -1
USP47-203ENST00000399455 COL4A3BPQ9Y5P4 624 aa8.78□□□□□ -1
USP47-203ENST00000399455 SOS2Q07890 1332 aaPredicted RBP8.78□□□□□ -1
USP47-203ENST00000399455 A0A0G2JLW4 131 aa8.78□□□□□ -1
USP47-203ENST00000399455 MAP7D1Q3KQU3 841 aa8.78□□□□□ -1
USP47-203ENST00000399455 KCNV1Q6PIU1 500 aa8.78□□□□□ -1
USP47-203ENST00000399455 IPO11Q9UI26 975 aaKnown RBP8.78□□□□□ -1
USP47-203ENST00000399455 PALD1Q9ULE6 856 aa8.78□□□□□ -1
USP47-203ENST00000399455 GMNNO75496 209 aa8.78□□□□□ -1
USP47-203ENST00000399455 CSPG5O95196 566 aa8.78□□□□□ -1
USP47-203ENST00000399455 JAK3P52333 1124 aa8.78□□□□□ -1
USP47-203ENST00000399455 HAUS1Q96CS2 278 aa8.78□□□□□ -1
USP47-203ENST00000399455 ADCY9O60503 1353 aa8.78□□□□□ -1
USP47-203ENST00000399455 USP17L15C9J2P7 530 aa8.78□□□□□ -1
USP47-203ENST00000399455 USP17L13C9JLJ4 530 aa8.78□□□□□ -1
USP47-203ENST00000399455 USP17L11C9JVI0 530 aa8.78□□□□□ -1
USP47-203ENST00000399455 USP17L18D6R9N7 530 aa8.78□□□□□ -1
USP47-203ENST00000399455 USP17L22D6RA61 530 aa8.78□□□□□ -1
USP47-203ENST00000399455 USP17L17D6RBQ6 530 aa8.78□□□□□ -1
USP47-203ENST00000399455 USP17L19D6RCP7 530 aa8.78□□□□□ -1
USP47-203ENST00000399455 USP17L20D6RJB6 530 aa8.78□□□□□ -1
USP47-203ENST00000399455 HSPD1P10809 573 aaKnown RBP8.78□□□□□ -1
USP47-203ENST00000399455 GCFC2P16383 781 aaKnown RBP8.78□□□□□ -1
USP47-203ENST00000399455 TGFB2P61812 414 aa8.78□□□□□ -1
USP47-203ENST00000399455 USP17L24Q0WX57 530 aa8.78□□□□□ -1
USP47-203ENST00000399455 PAK1Q13153 545 aa8.78□□□□□ -1
USP47-203ENST00000399455 SPECC1LQ69YQ0 1117 aa8.78□□□□□ -1
USP47-203ENST00000399455 INTS4Q96HW7 963 aaKnown RBP8.78□□□□□ -1
USP47-203ENST00000399455 SSH2Q76I76 1423 aa8.78□□□□□ -1
USP47-203ENST00000399455 SLC15A2Q16348 729 aa8.77□□□□□ -1
USP47-203ENST00000399455 FAM227BQ96M60 508 aa8.77□□□□□ -1
USP47-203ENST00000399455 TNKSO95271 1327 aa8.77□□□□□ -1
USP47-203ENST00000399455 MED14O60244 1454 aa8.77□□□□□ -1.01
USP47-203ENST00000399455 IQSEC2Q5JU85 1478 aa8.77□□□□□ -1.01
USP47-203ENST00000399455 OR52Z1P0C646 297 aa8.77□□□□□ -1.01
USP47-203ENST00000399455 GAP43P17677 238 aa8.77□□□□□ -1.01
USP47-203ENST00000399455 ARPP19P56211 112 aa8.77□□□□□ -1.01
USP47-203ENST00000399455 ITIH3Q06033 890 aa8.77□□□□□ -1.01
USP47-203ENST00000399455 EZH2Q15910 746 aaKnown RBP8.77□□□□□ -1.01
USP47-203ENST00000399455 MICALCLQ6ZW33 695 aa8.77□□□□□ -1.01
USP47-203ENST00000399455 GANCQ8TET4 914 aa8.77□□□□□ -1.01
USP47-203ENST00000399455 MAIP1Q8WWC4 291 aa8.77□□□□□ -1.01
USP47-203ENST00000399455 PRPSAP1Q14558 356 aa8.77□□□□□ -1.01
USP47-203ENST00000399455 NSRP1Q9H0G5 558 aaKnown RBP8.77□□□□□ -1.01
USP47-203ENST00000399455 PANK4Q9NVE7 773 aa8.77□□□□□ -1.01
USP47-203ENST00000399455 VPS54Q9P1Q0 977 aa8.77□□□□□ -1.01
USP47-203ENST00000399455 LARSQ9P2J5 1176 aaKnown RBP8.77□□□□□ -1.01
USP47-203ENST00000399455 LUC7L2Q9Y383 392 aaKnown RBP8.77□□□□□ -1.01
USP47-203ENST00000399455 RBM46Q8TBY0 533 aaKnown RBP8.77□□□□□ -1.01
USP47-203ENST00000399455 IFT122Q9HBG6 1241 aa8.77□□□□□ -1.01
USP47-203ENST00000399455 TBC1D7Q9P0N9 293 aa8.77□□□□□ -1.01
USP47-203ENST00000399455 CNOT7Q9UIV1 285 aaKnown RBP8.77□□□□□ -1.01
USP47-203ENST00000399455 INO80B-WBP1J3KQ70 363 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms