RNA–Protein interactions for RNA: ENST00000399275.6

SMAD9-203, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMAD9, Length 5,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-203ENST00000399275 ATP5J2-PTCD1G3V325 749 aa10.51□□□□□ -0.73
SMAD9-203ENST00000399275 PTCD1O75127 700 aaKnown RBP10.51□□□□□ -0.73
SMAD9-203ENST00000399275 DEXIO95424 95 aa10.51□□□□□ -0.73
SMAD9-203ENST00000399275 PARP1P09874 1014 aaKnown RBP10.51□□□□□ -0.73
SMAD9-203ENST00000399275 HARSP12081 509 aaKnown RBP10.51□□□□□ -0.73
SMAD9-203ENST00000399275 GYS2P54840 703 aa10.51□□□□□ -0.73
SMAD9-203ENST00000399275 ASIC1P78348 528 aa10.51□□□□□ -0.73
SMAD9-203ENST00000399275 ITGB3BPQ13352 177 aaPredicted RBP10.51□□□□□ -0.73
SMAD9-203ENST00000399275 PNOCQ13519 176 aa10.51□□□□□ -0.73
SMAD9-203ENST00000399275 CWF19L2Q2TBE0 894 aaKnown RBP10.51□□□□□ -0.73
SMAD9-203ENST00000399275 CAVIN4Q5BKX8 364 aa10.51□□□□□ -0.73
SMAD9-203ENST00000399275 CTAGE3PQ8IX95 158 aa10.51□□□□□ -0.73
SMAD9-203ENST00000399275 KBTBD3Q8NAB2 608 aa10.51□□□□□ -0.73
SMAD9-203ENST00000399275 C17orf50Q8WW18 174 aa10.51□□□□□ -0.73
SMAD9-203ENST00000399275 HIC2Q96JB3 615 aa10.51□□□□□ -0.73
SMAD9-203ENST00000399275 NOX5Q96PH1 765 aa10.51□□□□□ -0.73
SMAD9-203ENST00000399275 UNC45AQ9H3U1 944 aa10.51□□□□□ -0.73
SMAD9-203ENST00000399275 STOML1Q9UBI4 398 aa10.51□□□□□ -0.73
SMAD9-203ENST00000399275 SASH1O94885 1247 aa10.51□□□□□ -0.73
SMAD9-203ENST00000399275 PRKG1Q13976 671 aa10.51□□□□□ -0.73
SMAD9-203ENST00000399275 GOLGA8QA0A0J9YX86 632 aa10.5□□□□□ -0.73
SMAD9-203ENST00000399275 GOLGA8OA6NCC3 632 aa10.5□□□□□ -0.73
SMAD9-203ENST00000399275 LRRIQ3A6PVS8 624 aaPredicted RBP10.5□□□□□ -0.73
SMAD9-203ENST00000399275 GOLGA8NF8WBI6 632 aa10.5□□□□□ -0.73
SMAD9-203ENST00000399275 STK10O94804 968 aaKnown RBP10.5□□□□□ -0.73
SMAD9-203ENST00000399275 SCP2P22307 547 aa10.5□□□□□ -0.73
SMAD9-203ENST00000399275 GJA8P48165 433 aa10.5□□□□□ -0.73
SMAD9-203ENST00000399275 RNASELQ05823 741 aaKnown RBP10.5□□□□□ -0.73
SMAD9-203ENST00000399275 CFAP221Q4G0U5 840 aa10.5□□□□□ -0.73
SMAD9-203ENST00000399275 IFIT1BQ5T764 474 aaKnown RBP10.5□□□□□ -0.73
SMAD9-203ENST00000399275 ARHGAP22Q7Z5H3 698 aa10.5□□□□□ -0.73
SMAD9-203ENST00000399275 SLF1Q9BQI6 1058 aa10.5□□□□□ -0.73
SMAD9-203ENST00000399275 ANGEL1Q9UNK9 670 aaKnown RBP10.5□□□□□ -0.73
SMAD9-203ENST00000399275 ATP5JP18859 108 aa10.5□□□□□ -0.73
SMAD9-203ENST00000399275 NDUFA8P51970 172 aa10.5□□□□□ -0.73
SMAD9-203ENST00000399275 KCTD16Q68DU8 428 aa10.5□□□□□ -0.73
SMAD9-203ENST00000399275 LDHAL6AQ6ZMR3 332 aa10.5□□□□□ -0.73
SMAD9-203ENST00000399275 COPS6Q7L5N1 327 aa10.5□□□□□ -0.73
SMAD9-203ENST00000399275 DDX42Q86XP3 938 aaKnown RBP eCLIP10.5□□□□□ -0.73
SMAD9-203ENST00000399275 KAT14Q9H8E8 782 aa10.5□□□□□ -0.73
SMAD9-203ENST00000399275 MKNK2Q9HBH9 465 aa10.5□□□□□ -0.73
SMAD9-203ENST00000399275 STMN3Q9NZ72 180 aa10.5□□□□□ -0.73
SMAD9-203ENST00000399275 ABCA8O94911 1581 aa10.5□□□□□ -0.73
SMAD9-203ENST00000399275 APOA1P02647 267 aa10.5□□□□□ -0.73
SMAD9-203ENST00000399275 PLCB3Q01970 1234 aa10.5□□□□□ -0.73
SMAD9-203ENST00000399275 MECOMQ03112 1051 aa10.5□□□□□ -0.73
SMAD9-203ENST00000399275 PDE4BQ07343 736 aa10.5□□□□□ -0.73
SMAD9-203ENST00000399275 TBC1D8BQ0IIM8 1120 aa10.5□□□□□ -0.73
SMAD9-203ENST00000399275 CUL4BQ13620 913 aa10.5□□□□□ -0.73
SMAD9-203ENST00000399275 KIFAP3Q92845 792 aa10.5□□□□□ -0.73
SMAD9-203ENST00000399275 TUBA8Q9NY65 449 aaPredicted RBP10.5□□□□□ -0.73
SMAD9-203ENST00000399275 ARHGAP31Q2M1Z3 1444 aa10.5□□□□□ -0.73
SMAD9-203ENST00000399275 ASXL2Q76L83 1435 aa10.5□□□□□ -0.73
SMAD9-203ENST00000399275 TADA3O75528 432 aa10.5□□□□□ -0.73
SMAD9-203ENST00000399275 PDE5AO76074 875 aa10.5□□□□□ -0.73
SMAD9-203ENST00000399275 KRT15P19012 456 aa10.5□□□□□ -0.73
SMAD9-203ENST00000399275 CYP2C19P33261 490 aa10.5□□□□□ -0.73
SMAD9-203ENST00000399275 C6orf118Q5T5N4 469 aa10.5□□□□□ -0.73
SMAD9-203ENST00000399275 KRT40Q6A162 431 aa10.5□□□□□ -0.73
SMAD9-203ENST00000399275 TRAF7Q6Q0C0 670 aa10.5□□□□□ -0.73
SMAD9-203ENST00000399275 EYA1Q99502 592 aa10.5□□□□□ -0.73
SMAD9-203ENST00000399275 DESI2Q9BSY9 194 aa10.5□□□□□ -0.73
SMAD9-203ENST00000399275 USP44Q9H0E7 712 aa10.5□□□□□ -0.73
SMAD9-203ENST00000399275 MCM8Q9UJA3 840 aa10.5□□□□□ -0.73
SMAD9-203ENST00000399275 COPG1Q9Y678 874 aaKnown RBP10.5□□□□□ -0.73
SMAD9-203ENST00000399275 CFAP74Q9C0B2 1584 aa10.49□□□□□ -0.73
SMAD9-203ENST00000399275 VCAM1P19320 739 aa10.49□□□□□ -0.73
SMAD9-203ENST00000399275 GNAQP50148 359 aa10.49□□□□□ -0.73
SMAD9-203ENST00000399275 SLC9C2Q5TAH2 1124 aa10.49□□□□□ -0.73
SMAD9-203ENST00000399275 SIKE1Q9BRV8 207 aa10.49□□□□□ -0.73
SMAD9-203ENST00000399275 OSBPL5Q9H0X9 879 aaPredicted RBP10.49□□□□□ -0.73
SMAD9-203ENST00000399275 FANCLQ9NW38 375 aa10.49□□□□□ -0.73
SMAD9-203ENST00000399275 GOLGA8IPA6NC78 632 aa10.49□□□□□ -0.73
SMAD9-203ENST00000399275 ESRRBO95718 433 aa10.49□□□□□ -0.73
SMAD9-203ENST00000399275 EEF1B2P24534 225 aaKnown RBP10.49□□□□□ -0.73
SMAD9-203ENST00000399275 PLCD1P51178 756 aa10.49□□□□□ -0.73
SMAD9-203ENST00000399275 GUCY2FP51841 1108 aa10.49□□□□□ -0.73
SMAD9-203ENST00000399275 TBC1D5Q92609 795 aa10.49□□□□□ -0.73
SMAD9-203ENST00000399275 OPTNQ96CV9 577 aa10.49□□□□□ -0.73
SMAD9-203ENST00000399275 NOC4LQ9BVI4 516 aaKnown RBP10.49□□□□□ -0.73
SMAD9-203ENST00000399275 TRIM31Q9BZY9 425 aa10.49□□□□□ -0.73
SMAD9-203ENST00000399275 TEKT2Q9UIF3 430 aa10.49□□□□□ -0.73
SMAD9-203ENST00000399275 LAMC1P11047 1609 aa10.49□□□□□ -0.73
SMAD9-203ENST00000399275 ATP10AO60312 1499 aa10.49□□□□□ -0.73
SMAD9-203ENST00000399275 CC2D1AQ6P1N0 951 aaPredicted RBP10.49□□□□□ -0.73
SMAD9-203ENST00000399275 SNX29Q8TEQ0 813 aa10.49□□□□□ -0.73
SMAD9-203ENST00000399275 ZNF483Q8TF39 744 aaPredicted RBP10.49□□□□□ -0.73
SMAD9-203ENST00000399275 FERMT2Q96AC1 680 aa10.49□□□□□ -0.73
SMAD9-203ENST00000399275 CABP5Q9NP86 173 aa10.49□□□□□ -0.73
SMAD9-203ENST00000399275 GMEB1Q9Y692 573 aa10.49□□□□□ -0.73
SMAD9-203ENST00000399275 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.49□□□□□ -0.73
SMAD9-203ENST00000399275 E7EWF7 191 aa10.49□□□□□ -0.73
SMAD9-203ENST00000399275 STAT2P52630 851 aa10.49□□□□□ -0.73
SMAD9-203ENST00000399275 ARHGAP44Q17R89 818 aa10.49□□□□□ -0.73
SMAD9-203ENST00000399275 VWA3BQ502W6 1294 aa10.49□□□□□ -0.73
SMAD9-203ENST00000399275 IFNL2Q8IZJ0 200 aa10.49□□□□□ -0.73
SMAD9-203ENST00000399275 ST13P5Q8NFI4 369 aaPredicted RBP10.49□□□□□ -0.73
SMAD9-203ENST00000399275 BPIFA3Q9BQP9 254 aa10.49□□□□□ -0.73
SMAD9-203ENST00000399275 UBA5Q9GZZ9 404 aa10.49□□□□□ -0.73
SMAD9-203ENST00000399275 POLR3EQ9NVU0 708 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms