RNA–Protein interactions for RNA: ENST00000399050.8

CTNND1-205, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-205ENST00000399050 SMCO2A6NFE2 343 aa9.49□□□□□ -0.89
CTNND1-205ENST00000399050 EIF3CLB5ME19 914 aaKnown RBP9.49□□□□□ -0.89
CTNND1-205ENST00000399050 HIBADHP31937 336 aaKnown RBP9.49□□□□□ -0.89
CTNND1-205ENST00000399050 PHBP35232 272 aa9.49□□□□□ -0.89
CTNND1-205ENST00000399050 SLC7A5Q01650 507 aa9.49□□□□□ -0.89
CTNND1-205ENST00000399050 SARM1Q6SZW1 724 aa9.49□□□□□ -0.89
CTNND1-205ENST00000399050 IFNL3Q8IZI9 196 aa9.49□□□□□ -0.89
CTNND1-205ENST00000399050 CCT6BQ92526 530 aa9.49□□□□□ -0.89
CTNND1-205ENST00000399050 EIF3CQ99613 913 aaKnown RBP9.49□□□□□ -0.89
CTNND1-205ENST00000399050 TYW1Q9NV66 732 aaKnown RBP9.49□□□□□ -0.89
CTNND1-205ENST00000399050 USH1CQ9Y6N9 552 aa9.49□□□□□ -0.89
CTNND1-205ENST00000399050 KDM3AQ9Y4C1 1321 aa9.49□□□□□ -0.89
CTNND1-205ENST00000399050 CAPN12Q6ZSI9 719 aa9.48□□□□□ -0.89
CTNND1-205ENST00000399050 CABLES1Q8TDN4 633 aa9.48□□□□□ -0.89
CTNND1-205ENST00000399050 PDLIM2Q96JY6 352 aa9.48□□□□□ -0.89
CTNND1-205ENST00000399050 VPS41P49754 854 aa9.48□□□□□ -0.89
CTNND1-205ENST00000399050 CC2D1AQ6P1N0 951 aaPredicted RBP9.48□□□□□ -0.89
CTNND1-205ENST00000399050 TOGARAM2Q6ZUX3 1019 aa9.48□□□□□ -0.89
CTNND1-205ENST00000399050 TADA2BQ86TJ2 420 aa9.48□□□□□ -0.89
CTNND1-205ENST00000399050 LRRC8CQ8TDW0 803 aa9.48□□□□□ -0.89
CTNND1-205ENST00000399050 GSDMAQ96QA5 445 aa9.48□□□□□ -0.89
CTNND1-205ENST00000399050 NT5C3AQ9H0P0 336 aa9.48□□□□□ -0.89
CTNND1-205ENST00000399050 TLR7Q9NYK1 1049 aaKnown RBP9.48□□□□□ -0.89
CTNND1-205ENST00000399050 SNX16P57768 344 aa9.48□□□□□ -0.89
CTNND1-205ENST00000399050 COG7P83436 770 aa9.48□□□□□ -0.89
CTNND1-205ENST00000399050 TMCO4Q5TGY1 634 aa9.48□□□□□ -0.89
CTNND1-205ENST00000399050 MMS22LQ6ZRQ5 1243 aa9.48□□□□□ -0.89
CTNND1-205ENST00000399050 RDH13Q8NBN7 331 aa9.48□□□□□ -0.89
CTNND1-205ENST00000399050 CFAP61Q8NHU2 1237 aa9.48□□□□□ -0.89
CTNND1-205ENST00000399050 MROH5Q6ZUA9 1318 aa9.48□□□□□ -0.89
CTNND1-205ENST00000399050 ABCA5Q8WWZ7 1642 aa9.48□□□□□ -0.89
CTNND1-205ENST00000399050 DDX39AO00148 427 aaKnown RBP9.48□□□□□ -0.89
CTNND1-205ENST00000399050 BACH1O14867 736 aa9.48□□□□□ -0.89
CTNND1-205ENST00000399050 LONP1P36776 959 aaKnown RBP9.48□□□□□ -0.89
CTNND1-205ENST00000399050 TTLL12Q14166 644 aaPredicted RBP9.48□□□□□ -0.89
CTNND1-205ENST00000399050 NAA30Q147X3 362 aaPredicted RBP9.48□□□□□ -0.89
CTNND1-205ENST00000399050 REXO1Q8N1G1 1221 aaKnown RBP9.48□□□□□ -0.89
CTNND1-205ENST00000399050 AFAP1L2Q8N4X5 818 aa9.48□□□□□ -0.89
CTNND1-205ENST00000399050 GLT8D2Q9H1C3 349 aa9.48□□□□□ -0.89
CTNND1-205ENST00000399050 LARSQ9P2J5 1176 aaKnown RBP9.48□□□□□ -0.89
CTNND1-205ENST00000399050 PTPN22Q9Y2R2 807 aa9.48□□□□□ -0.89
CTNND1-205ENST00000399050 ATF2P15336 505 aa9.48□□□□□ -0.89
CTNND1-205ENST00000399050 NR1D1P20393 614 aa9.48□□□□□ -0.89
CTNND1-205ENST00000399050 GUCY2CP25092 1073 aa9.48□□□□□ -0.89
CTNND1-205ENST00000399050 MAP3K21Q5TCX8 1036 aa9.48□□□□□ -0.89
CTNND1-205ENST00000399050 CASC4Q6P4E1 433 aa9.48□□□□□ -0.89
CTNND1-205ENST00000399050 WDR7Q9Y4E6 1490 aa9.48□□□□□ -0.89
CTNND1-205ENST00000399050 M0R2C6 588 aa9.47□□□□□ -0.89
CTNND1-205ENST00000399050 RIMBP2O15034 1052 aa9.47□□□□□ -0.89
CTNND1-205ENST00000399050 STK10O94804 968 aaKnown RBP9.47□□□□□ -0.89
CTNND1-205ENST00000399050 EEF2KMTQ96G04 330 aa9.47□□□□□ -0.89
CTNND1-205ENST00000399050 NHEJ1Q9H9Q4 299 aaPredicted RBP9.47□□□□□ -0.89
CTNND1-205ENST00000399050 BCAP29Q9UHQ4 241 aa9.47□□□□□ -0.89
CTNND1-205ENST00000399050 USP27XA6NNY8 438 aa9.47□□□□□ -0.89
CTNND1-205ENST00000399050 A1BGP04217 495 aa9.47□□□□□ -0.89
CTNND1-205ENST00000399050 TFAP4Q01664 338 aa9.47□□□□□ -0.89
CTNND1-205ENST00000399050 RSAD2Q8WXG1 361 aa9.47□□□□□ -0.89
CTNND1-205ENST00000399050 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.47□□□□□ -0.89
CTNND1-205ENST00000399050 FMNL1O95466 1100 aaPredicted RBP9.47□□□□□ -0.89
CTNND1-205ENST00000399050 CYP21A2P08686 494 aa9.47□□□□□ -0.89
CTNND1-205ENST00000399050 OR52Z1P0C646 297 aa9.47□□□□□ -0.89
CTNND1-205ENST00000399050 CYP2J2P51589 502 aa9.47□□□□□ -0.89
CTNND1-205ENST00000399050 STRN3Q13033 797 aa9.47□□□□□ -0.89
CTNND1-205ENST00000399050 PPP2R5AQ15172 486 aa9.47□□□□□ -0.89
CTNND1-205ENST00000399050 TAF11Q15544 211 aa9.47□□□□□ -0.89
CTNND1-205ENST00000399050 FOXP1Q9H334 677 aaPredicted RBP9.47□□□□□ -0.89
CTNND1-205ENST00000399050 Q9H521 79 aa9.47□□□□□ -0.89
CTNND1-205ENST00000399050 CFAP65Q6ZU64 1925 aaKnown RBP9.47□□□□□ -0.89
CTNND1-205ENST00000399050 PASKQ96RG2 1323 aa9.47□□□□□ -0.89
CTNND1-205ENST00000399050 ATP1A3P13637 1013 aa9.47□□□□□ -0.89
CTNND1-205ENST00000399050 IL9RQ01113 521 aa9.47□□□□□ -0.89
CTNND1-205ENST00000399050 KIF23Q02241 960 aaPredicted RBP9.47□□□□□ -0.89
CTNND1-205ENST00000399050 ZNF658Q5TYW1 1059 aaPredicted RBP9.47□□□□□ -0.89
CTNND1-205ENST00000399050 ATP8A1Q9Y2Q0 1164 aa9.47□□□□□ -0.89
CTNND1-205ENST00000399050 KCNQ3O43525 872 aa9.47□□□□□ -0.89
CTNND1-205ENST00000399050 EEF1GP26641 437 aaKnown RBP9.47□□□□□ -0.89
CTNND1-205ENST00000399050 CTAGE3PQ8IX95 158 aa9.47□□□□□ -0.89
CTNND1-205ENST00000399050 ENOX1Q8TC92 643 aaKnown RBP9.47□□□□□ -0.89
CTNND1-205ENST00000399050 PPP4R1Q8TF05 950 aa9.47□□□□□ -0.89
CTNND1-205ENST00000399050 CTNND1O60716 968 aaKnown RBP9.46□□□□□ -0.89
CTNND1-205ENST00000399050 NDUFA10O95299 355 aa9.46□□□□□ -0.89
CTNND1-205ENST00000399050 H2AFZP0C0S5 128 aa9.46□□□□□ -0.89
CTNND1-205ENST00000399050 TPTE2Q6XPS3 522 aa9.46□□□□□ -0.89
CTNND1-205ENST00000399050 H2AFVQ71UI9 128 aa9.46□□□□□ -0.89
CTNND1-205ENST00000399050 GPKOWQ92917 476 aaPredicted RBP eCLIP9.46□□□□□ -0.89
CTNND1-205ENST00000399050 RIC8AQ9NPQ8 531 aa9.46□□□□□ -0.89
CTNND1-205ENST00000399050 ARMCX3Q9UH62 379 aaPredicted RBP9.46□□□□□ -0.89
CTNND1-205ENST00000399050 PPP1R9AQ9ULJ8 1098 aa9.46□□□□□ -0.89
CTNND1-205ENST00000399050 TACC3Q9Y6A5 838 aa9.46□□□□□ -0.89
CTNND1-205ENST00000399050 SCG2P13521 617 aa9.46□□□□□ -0.89
CTNND1-205ENST00000399050 CNOT10Q9H9A5 744 aaKnown RBP9.46□□□□□ -0.89
CTNND1-205ENST00000399050 RAB20Q9NX57 234 aa9.46□□□□□ -0.89
CTNND1-205ENST00000399050 PFDN1O60925 122 aa9.46□□□□□ -0.9
CTNND1-205ENST00000399050 MYCNP04198 464 aaPredicted RBP9.46□□□□□ -0.9
CTNND1-205ENST00000399050 PPP2R5DQ14738 602 aa9.46□□□□□ -0.9
CTNND1-205ENST00000399050 USH1GQ495M9 461 aa9.46□□□□□ -0.9
CTNND1-205ENST00000399050 ATP2A3Q93084 1043 aa9.46□□□□□ -0.9
CTNND1-205ENST00000399050 KLHL29Q96CT2 875 aa9.46□□□□□ -0.9
CTNND1-205ENST00000399050 RWDD2AQ9UIY3 292 aa9.46□□□□□ -0.9
CTNND1-205ENST00000399050 PCDHA13Q9Y5I0 950 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms