RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 RBBP6Q7Z6E9 1792 aaKnown RBP22.37■■□□□ 1.17
PDLIM2-205ENST00000397761 ADAMTS3O15072 1205 aa22.36■■□□□ 1.17
PDLIM2-205ENST00000397761 GNA11P29992 359 aa22.36■■□□□ 1.17
PDLIM2-205ENST00000397761 TOB1P50616 345 aaPredicted RBP22.36■■□□□ 1.17
PDLIM2-205ENST00000397761 LDLRAD1Q5T700 205 aa22.36■■□□□ 1.17
PDLIM2-205ENST00000397761 RBM46Q8TBY0 533 aaKnown RBP22.36■■□□□ 1.17
PDLIM2-205ENST00000397761 SPATA32Q96LK8 384 aa22.36■■□□□ 1.17
PDLIM2-205ENST00000397761 RANBP17Q9H2T7 1088 aaKnown RBP22.36■■□□□ 1.17
PDLIM2-205ENST00000397761 C6orf50Q9HD87 102 aa22.36■■□□□ 1.17
PDLIM2-205ENST00000397761 YEATS4O95619 227 aa22.35■■□□□ 1.17
PDLIM2-205ENST00000397761 IKQ13123 557 aaPredicted RBP22.35■■□□□ 1.17
PDLIM2-205ENST00000397761 SKOR2Q2VWA4 1001 aaPredicted RBP22.35■■□□□ 1.17
PDLIM2-205ENST00000397761 ARMC9Q7Z3E5 817 aa22.35■■□□□ 1.17
PDLIM2-205ENST00000397761 COA7Q96BR5 231 aa22.35■■□□□ 1.17
PDLIM2-205ENST00000397761 AMNQ9BXJ7 453 aa22.35■■□□□ 1.17
PDLIM2-205ENST00000397761 FTOQ9C0B1 505 aaKnown RBP eCLIP22.35■■□□□ 1.17
PDLIM2-205ENST00000397761 SMCO2A6NFE2 343 aa22.34■■□□□ 1.17
PDLIM2-205ENST00000397761 SPDYE5A6NIY4 337 aa22.34■■□□□ 1.17
PDLIM2-205ENST00000397761 PPATQ06203 517 aa22.34■■□□□ 1.17
PDLIM2-205ENST00000397761 EARS2Q5JPH6 523 aaKnown RBP22.34■■□□□ 1.17
PDLIM2-205ENST00000397761 ANO1Q5XXA6 986 aa22.34■■□□□ 1.17
PDLIM2-205ENST00000397761 TRIM75PA6NK02 468 aa22.34■■□□□ 1.17
PDLIM2-205ENST00000397761 TRAK2O60296 914 aa22.34■■□□□ 1.17
PDLIM2-205ENST00000397761 TOMM70O94826 608 aa22.34■■□□□ 1.17
PDLIM2-205ENST00000397761 TRAF1Q13077 416 aa22.34■■□□□ 1.17
PDLIM2-205ENST00000397761 DGKZQ13574 1117 aa22.34■■□□□ 1.17
PDLIM2-205ENST00000397761 MOB2Q70IA6 237 aa22.34■■□□□ 1.17
PDLIM2-205ENST00000397761 ERO1BQ86YB8 467 aa22.34■■□□□ 1.17
PDLIM2-205ENST00000397761 TEX2Q8IWB9 1127 aa22.34■■□□□ 1.17
PDLIM2-205ENST00000397761 PRPF38AQ8NAV1 312 aaKnown RBP22.34■■□□□ 1.17
PDLIM2-205ENST00000397761 LINC00301Q8NCQ3 95 aa22.34■■□□□ 1.17
PDLIM2-205ENST00000397761 BICD2Q8TD16 824 aa22.34■■□□□ 1.17
PDLIM2-205ENST00000397761 RIC8AQ9NPQ8 531 aa22.34■■□□□ 1.17
PDLIM2-205ENST00000397761 FBXO28Q9NVF7 368 aa22.34■■□□□ 1.17
PDLIM2-205ENST00000397761 PCDHA6Q9UN73 950 aa22.34■■□□□ 1.17
PDLIM2-205ENST00000397761 PCDHA8Q9Y5H6 950 aa22.34■■□□□ 1.17
PDLIM2-205ENST00000397761 PCDHA1Q9Y5I3 950 aa22.34■■□□□ 1.17
PDLIM2-205ENST00000397761 CLIC4Q9Y696 253 aa22.34■■□□□ 1.17
PDLIM2-205ENST00000397761 A0A0G2JMZ2 1700 aa22.33■■□□□ 1.17
PDLIM2-205ENST00000397761 FAM205CA6NFA0 338 aa22.33■■□□□ 1.16
PDLIM2-205ENST00000397761 TRAF5O00463 557 aa22.33■■□□□ 1.16
PDLIM2-205ENST00000397761 TRAPPC10P48553 1259 aa22.33■■□□□ 1.16
PDLIM2-205ENST00000397761 HMGCS2P54868 508 aa22.33■■□□□ 1.16
PDLIM2-205ENST00000397761 UBE2HP62256 183 aa22.33■■□□□ 1.16
PDLIM2-205ENST00000397761 FKBP1BP68106 108 aa22.33■■□□□ 1.16
PDLIM2-205ENST00000397761 PTPAQ15257 358 aa22.33■■□□□ 1.16
PDLIM2-205ENST00000397761 FBXO11Q86XK2 927 aa22.33■■□□□ 1.16
PDLIM2-205ENST00000397761 CLMNQ96JQ2 1002 aa22.33■■□□□ 1.16
PDLIM2-205ENST00000397761 SLF1Q9BQI6 1058 aa22.33■■□□□ 1.16
PDLIM2-205ENST00000397761 GLT8D2Q9H1C3 349 aa22.33■■□□□ 1.16
PDLIM2-205ENST00000397761 MORC2Q9Y6X9 1032 aaPredicted RBP22.33■■□□□ 1.16
PDLIM2-205ENST00000397761 GADD45BO75293 160 aaPredicted RBP22.32■■□□□ 1.16
PDLIM2-205ENST00000397761 ADCY7P51828 1080 aa22.32■■□□□ 1.16
PDLIM2-205ENST00000397761 SLC39A14Q15043 492 aa22.32■■□□□ 1.16
PDLIM2-205ENST00000397761 KLHL40Q2TBA0 621 aa22.32■■□□□ 1.16
PDLIM2-205ENST00000397761 NOM1Q5C9Z4 860 aaKnown RBP22.32■■□□□ 1.16
PDLIM2-205ENST00000397761 RPAP3Q9H6T3 665 aaPredicted RBP22.32■■□□□ 1.16
PDLIM2-205ENST00000397761 MBD3O95983 291 aa22.31■■□□□ 1.16
PDLIM2-205ENST00000397761 PPIL2Q13356 520 aa22.31■■□□□ 1.16
PDLIM2-205ENST00000397761 TTLL12Q14166 644 aaPredicted RBP22.31■■□□□ 1.16
PDLIM2-205ENST00000397761 REXO1Q8N1G1 1221 aaKnown RBP22.31■■□□□ 1.16
PDLIM2-205ENST00000397761 GPT2Q8TD30 523 aa22.31■■□□□ 1.16
PDLIM2-205ENST00000397761 KIFC2Q96AC6 838 aa22.31■■□□□ 1.16
PDLIM2-205ENST00000397761 ELP3Q9H9T3 547 aa22.31■■□□□ 1.16
PDLIM2-205ENST00000397761 PPP1R9AQ9ULJ8 1098 aa22.31■■□□□ 1.16
PDLIM2-205ENST00000397761 KCNH4Q9UQ05 1017 aa22.31■■□□□ 1.16
PDLIM2-205ENST00000397761 CXCL11O14625 94 aa22.3■■□□□ 1.16
PDLIM2-205ENST00000397761 FDX1P10109 184 aa22.3■■□□□ 1.16
PDLIM2-205ENST00000397761 CLK2P49760 499 aaKnown RBP22.3■■□□□ 1.16
PDLIM2-205ENST00000397761 SNAP25P60880 206 aa22.3■■□□□ 1.16
PDLIM2-205ENST00000397761 CEBPZQ03701 1054 aaKnown RBP22.3■■□□□ 1.16
PDLIM2-205ENST00000397761 SF3A1Q15459 793 aaKnown RBP22.3■■□□□ 1.16
PDLIM2-205ENST00000397761 KRT25Q7Z3Z0 450 aa22.3■■□□□ 1.16
PDLIM2-205ENST00000397761 KCNG4Q8TDN1 519 aa22.3■■□□□ 1.16
PDLIM2-205ENST00000397761 CNKSR2Q8WXI2 1034 aa22.3■■□□□ 1.16
PDLIM2-205ENST00000397761 PGBD1Q96JS3 809 aa22.3■■□□□ 1.16
PDLIM2-205ENST00000397761 TANGO6Q9C0B7 1094 aa22.3■■□□□ 1.16
PDLIM2-205ENST00000397761 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.3■■□□□ 1.16
PDLIM2-205ENST00000397761 NOL7Q9UMY1 257 aaKnown RBP22.3■■□□□ 1.16
PDLIM2-205ENST00000397761 MRPL12P52815 198 aaKnown RBP22.29■■□□□ 1.16
PDLIM2-205ENST00000397761 FMR1Q06787 632 aaKnown RBP eCLIP22.29■■□□□ 1.16
PDLIM2-205ENST00000397761 PIK3AP1Q6ZUJ8 805 aa22.29■■□□□ 1.16
PDLIM2-205ENST00000397761 RASGRP4Q8TDF6 673 aa22.29■■□□□ 1.16
PDLIM2-205ENST00000397761 CUL5Q93034 780 aa22.29■■□□□ 1.16
PDLIM2-205ENST00000397761 TMOD4Q9NZQ9 345 aa22.29■■□□□ 1.16
PDLIM2-205ENST00000397761 ADAMTS5Q9UNA0 930 aa22.29■■□□□ 1.16
PDLIM2-205ENST00000397761 DDX49Q9Y6V7 483 aaKnown RBP22.29■■□□□ 1.16
PDLIM2-205ENST00000397761 A0A0G2JLL6 359 aaPredicted RBP22.28■■□□□ 1.16
PDLIM2-205ENST00000397761 CCDC194A0A1B0GVG4 234 aa22.28■■□□□ 1.16
PDLIM2-205ENST00000397761 IRF6O14896 467 aa22.28■■□□□ 1.16
PDLIM2-205ENST00000397761 SPTLC2O15270 562 aa22.28■■□□□ 1.16
PDLIM2-205ENST00000397761 ITGBL1O95965 494 aaPredicted RBP22.28■■□□□ 1.16
PDLIM2-205ENST00000397761 STK38Q15208 465 aa22.28■■□□□ 1.16
PDLIM2-205ENST00000397761 PRRT2Q7Z6L0 340 aaPredicted RBP22.28■■□□□ 1.16
PDLIM2-205ENST00000397761 PSTPIP2Q9H939 334 aa22.28■■□□□ 1.16
PDLIM2-205ENST00000397761 SLC38A10Q9HBR0 1119 aa22.28■■□□□ 1.16
PDLIM2-205ENST00000397761 PCDHB6Q9Y5E3 794 aa22.28■■□□□ 1.16
PDLIM2-205ENST00000397761 ZNF536O15090 1300 aa22.28■■□□□ 1.16
PDLIM2-205ENST00000397761 MYPNQ86TC9 1320 aa22.28■■□□□ 1.16
PDLIM2-205ENST00000397761 OPLAHO14841 1288 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms