RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 CDHR1Q96JP9 859 aa6.62□□□□□ -1.35
PTPRD-206ENST00000397617 PANX2Q96RD6 677 aa6.62□□□□□ -1.35
PTPRD-206ENST00000397617 MTFR1LQ9H019 292 aa6.62□□□□□ -1.35
PTPRD-206ENST00000397617 FAM184BQ9ULE4 1060 aa6.62□□□□□ -1.35
PTPRD-206ENST00000397617 TTF2Q9UNY4 1162 aaKnown RBP6.62□□□□□ -1.35
PTPRD-206ENST00000397617 GTPBP10A4D1E9 387 aaKnown RBP6.62□□□□□ -1.35
PTPRD-206ENST00000397617 STAM2O75886 525 aa6.62□□□□□ -1.35
PTPRD-206ENST00000397617 PDHBP11177 359 aa6.62□□□□□ -1.35
PTPRD-206ENST00000397617 NCAPHQ15003 741 aa6.62□□□□□ -1.35
PTPRD-206ENST00000397617 GIMAP8Q8ND71 665 aaPredicted RBP6.62□□□□□ -1.35
PTPRD-206ENST00000397617 TFIP11Q9UBB9 837 aaKnown RBP6.62□□□□□ -1.35
PTPRD-206ENST00000397617 RFX1P22670 979 aa6.62□□□□□ -1.35
PTPRD-206ENST00000397617 RWDD2AQ9UIY3 292 aa6.62□□□□□ -1.35
PTPRD-206ENST00000397617 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.62□□□□□ -1.35
PTPRD-206ENST00000397617 B4DLN1 442 aa6.62□□□□□ -1.35
PTPRD-206ENST00000397617 NLRP5P59047 1200 aa6.62□□□□□ -1.35
PTPRD-206ENST00000397617 GPSM2P81274 684 aa6.62□□□□□ -1.35
PTPRD-206ENST00000397617 NFIL3Q16649 462 aa6.62□□□□□ -1.35
PTPRD-206ENST00000397617 ANO6Q4KMQ2 910 aa6.62□□□□□ -1.35
PTPRD-206ENST00000397617 ADGRA1Q86SQ6 560 aa6.62□□□□□ -1.35
PTPRD-206ENST00000397617 RBM46Q8TBY0 533 aaKnown RBP6.62□□□□□ -1.35
PTPRD-206ENST00000397617 CEP63Q96MT8 703 aa6.62□□□□□ -1.35
PTPRD-206ENST00000397617 FEZ1Q99689 392 aa6.62□□□□□ -1.35
PTPRD-206ENST00000397617 MKNK1Q9BUB5 465 aa6.62□□□□□ -1.35
PTPRD-206ENST00000397617 WDR11Q9BZH6 1224 aa6.62□□□□□ -1.35
PTPRD-206ENST00000397617 DISC1Q9NRI5 854 aa6.62□□□□□ -1.35
PTPRD-206ENST00000397617 ITIH3Q06033 890 aa6.61□□□□□ -1.35
PTPRD-206ENST00000397617 SHC4Q6S5L8 630 aa6.61□□□□□ -1.35
PTPRD-206ENST00000397617 STXBP4Q6ZWJ1 553 aa6.61□□□□□ -1.35
PTPRD-206ENST00000397617 STK11IPQ8N1F8 1099 aa6.61□□□□□ -1.35
PTPRD-206ENST00000397617 GTF3C2Q8WUA4 911 aaPredicted RBP6.61□□□□□ -1.35
PTPRD-206ENST00000397617 POLLQ9UGP5 575 aa6.61□□□□□ -1.35
PTPRD-206ENST00000397617 TMX2Q9Y320 296 aa6.61□□□□□ -1.35
PTPRD-206ENST00000397617 NDUFB9Q9Y6M9 179 aa6.61□□□□□ -1.35
PTPRD-206ENST00000397617 BRCA1P38398 1863 aaKnown RBP6.61□□□□□ -1.35
PTPRD-206ENST00000397617 FER1L6Q2WGJ9 1857 aa6.61□□□□□ -1.35
PTPRD-206ENST00000397617 PMM2O15305 246 aa6.61□□□□□ -1.35
PTPRD-206ENST00000397617 SPECC1LQ69YQ0 1117 aa6.61□□□□□ -1.35
PTPRD-206ENST00000397617 COL23A1Q86Y22 540 aaPredicted RBP6.61□□□□□ -1.35
PTPRD-206ENST00000397617 TMTC1Q8IUR5 882 aa6.61□□□□□ -1.35
PTPRD-206ENST00000397617 CUL5Q93034 780 aa6.61□□□□□ -1.35
PTPRD-206ENST00000397617 WDR18Q9BV38 432 aa6.61□□□□□ -1.35
PTPRD-206ENST00000397617 A0A1B0GTH6 734 aa6.61□□□□□ -1.35
PTPRD-206ENST00000397617 ACTN4O43707 911 aaKnown RBP6.61□□□□□ -1.35
PTPRD-206ENST00000397617 ADCY7P51828 1080 aa6.61□□□□□ -1.35
PTPRD-206ENST00000397617 ZNF280AP59817 542 aaPredicted RBP6.61□□□□□ -1.35
PTPRD-206ENST00000397617 CALML4Q96GE6 196 aa6.61□□□□□ -1.35
PTPRD-206ENST00000397617 RIT2Q99578 217 aa6.61□□□□□ -1.35
PTPRD-206ENST00000397617 ST6GALNAC4Q9H4F1 302 aa6.61□□□□□ -1.35
PTPRD-206ENST00000397617 PRKAB2O43741 272 aa6.61□□□□□ -1.35
PTPRD-206ENST00000397617 DNM2P50570 870 aa6.61□□□□□ -1.35
PTPRD-206ENST00000397617 MIGA1Q8NAN2 632 aa6.61□□□□□ -1.35
PTPRD-206ENST00000397617 SDR42E1Q8WUS8 393 aa6.61□□□□□ -1.35
PTPRD-206ENST00000397617 FAM81BQ96LP2 452 aa6.61□□□□□ -1.35
PTPRD-206ENST00000397617 FAM124BQ9H5Z6 455 aaPredicted RBP6.61□□□□□ -1.35
PTPRD-206ENST00000397617 ATP2A1O14983 1001 aa6.61□□□□□ -1.35
PTPRD-206ENST00000397617 APBA3O96018 575 aa6.61□□□□□ -1.35
PTPRD-206ENST00000397617 TOB1P50616 345 aaPredicted RBP6.61□□□□□ -1.35
PTPRD-206ENST00000397617 STK3Q13188 491 aa6.61□□□□□ -1.35
PTPRD-206ENST00000397617 TXNRD3Q86VQ6 643 aa6.61□□□□□ -1.35
PTPRD-206ENST00000397617 RUBCNQ92622 972 aa6.61□□□□□ -1.35
PTPRD-206ENST00000397617 HVCN1Q96D96 273 aa6.61□□□□□ -1.35
PTPRD-206ENST00000397617 FOXD4L1Q9NU39 408 aa6.61□□□□□ -1.35
PTPRD-206ENST00000397617 CLK2P49760 499 aaKnown RBP6.61□□□□□ -1.35
PTPRD-206ENST00000397617 NDUFA8P51970 172 aa6.61□□□□□ -1.35
PTPRD-206ENST00000397617 POU5F1Q01860 360 aaKnown RBP6.61□□□□□ -1.35
PTPRD-206ENST00000397617 LONRF3Q496Y0 759 aa6.61□□□□□ -1.35
PTPRD-206ENST00000397617 CENPPQ6IPU0 288 aa6.61□□□□□ -1.35
PTPRD-206ENST00000397617 C17orf75Q9HAS0 396 aa6.61□□□□□ -1.35
PTPRD-206ENST00000397617 LIMA1Q9UHB6 759 aaKnown RBP6.61□□□□□ -1.35
PTPRD-206ENST00000397617 H0YCG3 227 aa6.61□□□□□ -1.35
PTPRD-206ENST00000397617 MDM2Q00987 491 aaPredicted RBP6.61□□□□□ -1.35
PTPRD-206ENST00000397617 L2HGDHQ9H9P8 463 aa6.61□□□□□ -1.35
PTPRD-206ENST00000397617 PTGDRQ13258 359 aa6.6□□□□□ -1.35
PTPRD-206ENST00000397617 TKFCQ3LXA3 575 aa6.6□□□□□ -1.35
PTPRD-206ENST00000397617 C2CD5Q86YS7 1000 aa6.6□□□□□ -1.35
PTPRD-206ENST00000397617 SYN2Q92777 582 aaPredicted RBP6.6□□□□□ -1.35
PTPRD-206ENST00000397617 METTL14Q9HCE5 456 aaKnown RBP6.6□□□□□ -1.35
PTPRD-206ENST00000397617 IL17RBQ9NRM6 502 aa6.6□□□□□ -1.35
PTPRD-206ENST00000397617 OLFML3Q9NRN5 406 aa6.6□□□□□ -1.35
PTPRD-206ENST00000397617 CCNE1P24864 410 aa6.6□□□□□ -1.35
PTPRD-206ENST00000397617 POLD1P28340 1107 aa6.6□□□□□ -1.35
PTPRD-206ENST00000397617 SLC1A4P43007 532 aa6.6□□□□□ -1.35
PTPRD-206ENST00000397617 MARSP56192 900 aaKnown RBP6.6□□□□□ -1.35
PTPRD-206ENST00000397617 JAKMIP3Q5VZ66 844 aa6.6□□□□□ -1.35
PTPRD-206ENST00000397617 KRT79Q5XKE5 535 aa6.6□□□□□ -1.35
PTPRD-206ENST00000397617 SRBD1Q8N5C6 995 aaKnown RBP6.6□□□□□ -1.35
PTPRD-206ENST00000397617 ERGIC2Q96RQ1 377 aa6.6□□□□□ -1.35
PTPRD-206ENST00000397617 LRRC2Q9BYS8 371 aa6.6□□□□□ -1.35
PTPRD-206ENST00000397617 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.6□□□□□ -1.35
PTPRD-206ENST00000397617 SLX4Q8IY92 1834 aa6.6□□□□□ -1.35
PTPRD-206ENST00000397617 MYH10P35580 1976 aa6.6□□□□□ -1.35
PTPRD-206ENST00000397617 RTP1P59025 263 aa6.6□□□□□ -1.35
PTPRD-206ENST00000397617 ZSCAN29Q8IWY8 852 aaPredicted RBP6.6□□□□□ -1.35
PTPRD-206ENST00000397617 SREBF1P36956 1147 aa6.6□□□□□ -1.35
PTPRD-206ENST00000397617 USP14P54578 494 aa6.6□□□□□ -1.35
PTPRD-206ENST00000397617 SETQ01105 290 aaPredicted RBP6.6□□□□□ -1.35
PTPRD-206ENST00000397617 VSTM4Q8IW00 320 aa6.6□□□□□ -1.35
PTPRD-206ENST00000397617 MYH7BA7E2Y1 1941 aa6.6□□□□□ -1.35
PTPRD-206ENST00000397617 DICER1Q9UPY3 1922 aaKnown RBP6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms