RNA–Protein interactions for RNA: ENST00000397417.6

IFT140-202, Transcript of intraflagellar transport 140, humanhuman

TSL 5

Gene IFT140, Length 4,023 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-202ENST00000397417 WDHD1O75717 1129 aaPredicted RBP12.46□□□□□ -0.42
IFT140-202ENST00000397417 LIFRP42702 1097 aa12.46□□□□□ -0.42
IFT140-202ENST00000397417 EVX2Q03828 476 aa12.46□□□□□ -0.42
IFT140-202ENST00000397417 DALRD3Q5D0E6 543 aaKnown RBP12.46□□□□□ -0.42
IFT140-202ENST00000397417 CTAGE1Q96RT6 745 aa12.46□□□□□ -0.42
IFT140-202ENST00000397417 COA1Q9GZY4 146 aa12.46□□□□□ -0.42
IFT140-202ENST00000397417 SH2D4AQ9H788 454 aa12.46□□□□□ -0.42
IFT140-202ENST00000397417 PI4KBQ9UBF8 816 aa12.46□□□□□ -0.42
IFT140-202ENST00000397417 GDAQ9Y2T3 454 aa12.46□□□□□ -0.42
IFT140-202ENST00000397417 PLA2G4DQ86XP0 818 aa12.45□□□□□ -0.42
IFT140-202ENST00000397417 COL23A1Q86Y22 540 aaPredicted RBP12.45□□□□□ -0.42
IFT140-202ENST00000397417 FAM107BQ9H098 131 aa12.45□□□□□ -0.42
IFT140-202ENST00000397417 TAL1P17542 331 aaPredicted RBP12.45□□□□□ -0.42
IFT140-202ENST00000397417 DNAJC21Q5F1R6 531 aaKnown RBP12.45□□□□□ -0.42
IFT140-202ENST00000397417 HPS3Q969F9 1004 aa12.45□□□□□ -0.42
IFT140-202ENST00000397417 FERMT2Q96AC1 680 aa12.45□□□□□ -0.42
IFT140-202ENST00000397417 KCNQ5Q9NR82 932 aa12.45□□□□□ -0.42
IFT140-202ENST00000397417 EXOC3O60645 756 aa12.45□□□□□ -0.42
IFT140-202ENST00000397417 EEF2P13639 858 aaKnown RBP12.45□□□□□ -0.42
IFT140-202ENST00000397417 KIF5AQ12840 1032 aa12.45□□□□□ -0.42
IFT140-202ENST00000397417 NFIAQ12857 509 aa12.45□□□□□ -0.42
IFT140-202ENST00000397417 Q3C1V9 767 aa12.45□□□□□ -0.42
IFT140-202ENST00000397417 STXBP4Q6ZWJ1 553 aa12.45□□□□□ -0.42
IFT140-202ENST00000397417 MLKLQ8NB16 471 aa12.45□□□□□ -0.42
IFT140-202ENST00000397417 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.45□□□□□ -0.42
IFT140-202ENST00000397417 CSADQ9Y600 493 aa12.45□□□□□ -0.42
IFT140-202ENST00000397417 GSTTP1A0A1W2PQM5 241 aa12.44□□□□□ -0.42
IFT140-202ENST00000397417 RIOK3O14730 519 aaKnown RBP12.44□□□□□ -0.42
IFT140-202ENST00000397417 ZBED4O75132 1171 aa12.44□□□□□ -0.42
IFT140-202ENST00000397417 BMP3P12645 472 aa12.44□□□□□ -0.42
IFT140-202ENST00000397417 GYS1P13807 737 aa12.44□□□□□ -0.42
IFT140-202ENST00000397417 U2AF2P26368 475 aaKnown RBP eCLIP12.44□□□□□ -0.426e-7■■■■□ 26.4
IFT140-202ENST00000397417 FAM83BQ5T0W9 1011 aa12.44□□□□□ -0.42
IFT140-202ENST00000397417 CIAPIN1Q6FI81 312 aa12.44□□□□□ -0.42
IFT140-202ENST00000397417 TYW1BQ6NUM6 668 aa12.44□□□□□ -0.42
IFT140-202ENST00000397417 SRBD1Q8N5C6 995 aaKnown RBP12.44□□□□□ -0.42
IFT140-202ENST00000397417 TMEM87AQ8NBN3 555 aa12.44□□□□□ -0.42
IFT140-202ENST00000397417 CLIC2O15247 247 aa12.44□□□□□ -0.42
IFT140-202ENST00000397417 CA8P35219 290 aa12.44□□□□□ -0.42
IFT140-202ENST00000397417 CYLC1P35663 651 aaPredicted RBP12.44□□□□□ -0.42
IFT140-202ENST00000397417 SF3A3Q12874 501 aaKnown RBP eCLIP12.44□□□□□ -0.42
IFT140-202ENST00000397417 SPP2Q13103 211 aa12.44□□□□□ -0.42
IFT140-202ENST00000397417 PIGOQ8TEQ8 1089 aa12.44□□□□□ -0.42
IFT140-202ENST00000397417 AMNQ9BXJ7 453 aa12.44□□□□□ -0.42
IFT140-202ENST00000397417 TAOK3Q9H2K8 898 aa12.44□□□□□ -0.42
IFT140-202ENST00000397417 DAGLAQ9Y4D2 1042 aa12.44□□□□□ -0.42
IFT140-202ENST00000397417 KNDC1Q76NI1 1749 aa12.44□□□□□ -0.42
IFT140-202ENST00000397417 ANKRD62A6NC57 917 aa12.44□□□□□ -0.42
IFT140-202ENST00000397417 DDAH1O94760 285 aa12.44□□□□□ -0.42
IFT140-202ENST00000397417 ARHGEF16Q5VV41 709 aa12.44□□□□□ -0.42
IFT140-202ENST00000397417 RRAGAQ7L523 313 aa12.44□□□□□ -0.42
IFT140-202ENST00000397417 METTL13Q8N6R0 699 aa12.44□□□□□ -0.42
IFT140-202ENST00000397417 CHURC1Q8WUH1 139 aa12.44□□□□□ -0.42
IFT140-202ENST00000397417 STAG1Q8WVM7 1258 aa12.44□□□□□ -0.42
IFT140-202ENST00000397417 KRT5P13647 590 aa12.43□□□□□ -0.42
IFT140-202ENST00000397417 GRIN1Q05586 938 aa12.43□□□□□ -0.42
IFT140-202ENST00000397417 CDC37Q16543 378 aaPredicted RBP12.43□□□□□ -0.42
IFT140-202ENST00000397417 UTP14CQ5TAP6 766 aaKnown RBP12.43□□□□□ -0.42
IFT140-202ENST00000397417 TMTC3Q6ZXV5 915 aa12.43□□□□□ -0.42
IFT140-202ENST00000397417 MYRIPQ8NFW9 859 aa12.43□□□□□ -0.42
IFT140-202ENST00000397417 CACTINQ8WUQ7 758 aaKnown RBP12.43□□□□□ -0.42
IFT140-202ENST00000397417 CARD6Q9BX69 1037 aa12.43□□□□□ -0.42
IFT140-202ENST00000397417 ACBD3Q9H3P7 528 aa12.43□□□□□ -0.42
IFT140-202ENST00000397417 POLLQ9UGP5 575 aa12.43□□□□□ -0.42
IFT140-202ENST00000397417 IVNS1ABPQ9Y6Y0 642 aa12.43□□□□□ -0.42
IFT140-202ENST00000397417 RPAP1Q9BWH6 1393 aaPredicted RBP12.43□□□□□ -0.42
IFT140-202ENST00000397417 SF3B3Q15393 1217 aaKnown RBP12.43□□□□□ -0.42
IFT140-202ENST00000397417 HAUS3Q68CZ6 603 aa12.43□□□□□ -0.42
IFT140-202ENST00000397417 LRRC27Q9C0I9 530 aa12.43□□□□□ -0.42
IFT140-202ENST00000397417 SYNCQ9H7C4 482 aa12.43□□□□□ -0.42
IFT140-202ENST00000397417 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.43□□□□□ -0.42
IFT140-202ENST00000397417 PIM2Q9P1W9 311 aa12.43□□□□□ -0.42
IFT140-202ENST00000397417 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.43□□□□□ -0.42
IFT140-202ENST00000397417 BICDL2A1A5D9 508 aa12.43□□□□□ -0.42
IFT140-202ENST00000397417 ERLIN1O75477 346 aa12.43□□□□□ -0.42
IFT140-202ENST00000397417 CTNNA2P26232 953 aa12.43□□□□□ -0.42
IFT140-202ENST00000397417 PPP2R5BQ15173 497 aa12.43□□□□□ -0.42
IFT140-202ENST00000397417 SAMD7Q7Z3H4 446 aa12.43□□□□□ -0.42
IFT140-202ENST00000397417 BRIP1Q9BX63 1249 aa12.43□□□□□ -0.42
IFT140-202ENST00000397417 PCDHA4Q9UN74 947 aa12.43□□□□□ -0.42
IFT140-202ENST00000397417 SMIM23A6NLE4 172 aa12.42□□□□□ -0.42
IFT140-202ENST00000397417 CETN3O15182 167 aa12.42□□□□□ -0.42
IFT140-202ENST00000397417 FAM102BQ5T8I3 360 aa12.42□□□□□ -0.42
IFT140-202ENST00000397417 CNNM4Q6P4Q7 775 aa12.42□□□□□ -0.42
IFT140-202ENST00000397417 SEPT14Q6ZU15 432 aa12.42□□□□□ -0.42
IFT140-202ENST00000397417 POLR3EQ9NVU0 708 aa12.42□□□□□ -0.42
IFT140-202ENST00000397417 USP42Q9H9J4 1324 aaKnown RBP12.42□□□□□ -0.42
IFT140-202ENST00000397417 TRIM49BA6NDI0 452 aa12.42□□□□□ -0.42
IFT140-202ENST00000397417 GCOM1H8Y6P7 765 aaPredicted RBP12.42□□□□□ -0.42
IFT140-202ENST00000397417 CTDNEP1O95476 244 aa12.42□□□□□ -0.42
IFT140-202ENST00000397417 RPN1P04843 607 aaKnown RBP12.42□□□□□ -0.42
IFT140-202ENST00000397417 PRR29P0C7W0 189 aa12.42□□□□□ -0.42
IFT140-202ENST00000397417 POLR2MP0CAP2 368 aa12.42□□□□□ -0.42
IFT140-202ENST00000397417 ABCB4P21439 1286 aa12.42□□□□□ -0.42
IFT140-202ENST00000397417 SLC30A10Q6XR72 485 aa12.42□□□□□ -0.42
IFT140-202ENST00000397417 TSPYL1Q9H0U9 437 aa12.42□□□□□ -0.42
IFT140-202ENST00000397417 FZD1Q9UP38 647 aa12.42□□□□□ -0.42
IFT140-202ENST00000397417 MROH7-TTC4A0A0A0MT08 1334 aa12.42□□□□□ -0.42
IFT140-202ENST00000397417 CSPG5O95196 566 aa12.42□□□□□ -0.42
IFT140-202ENST00000397417 TDP2O95551 362 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms