RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 NRBP1Q9UHY1 535 aa17.07■□□□□ 0.32
SEC13-208ENST00000397109 PNMA2Q9UL42 364 aa17.07■□□□□ 0.32
SEC13-208ENST00000397109 CYBAP13498 195 aa17.06■□□□□ 0.32
SEC13-208ENST00000397109 CNGA1P29973 690 aa17.06■□□□□ 0.32
SEC13-208ENST00000397109 LHX8Q68G74 356 aa17.06■□□□□ 0.32
SEC13-208ENST00000397109 TTBK2Q6IQ55 1244 aa17.06■□□□□ 0.32
SEC13-208ENST00000397109 RASGRP2Q7LDG7 609 aa17.06■□□□□ 0.32
SEC13-208ENST00000397109 ANKRD35Q8N283 1001 aa17.06■□□□□ 0.32
SEC13-208ENST00000397109 PNMA1Q8ND90 353 aa17.06■□□□□ 0.32
SEC13-208ENST00000397109 ESYT1Q9BSJ8 1104 aa17.06■□□□□ 0.32
SEC13-208ENST00000397109 ACAD9Q9H845 621 aa17.06■□□□□ 0.32
SEC13-208ENST00000397109 GPCPD1Q9NPB8 672 aa17.06■□□□□ 0.32
SEC13-208ENST00000397109 DDX20Q9UHI6 824 aaKnown RBP17.06■□□□□ 0.32
SEC13-208ENST00000397109 ZNF536O15090 1300 aa17.06■□□□□ 0.32
SEC13-208ENST00000397109 DNAJC25-GNG10A0A024R161 153 aa17.05■□□□□ 0.32
SEC13-208ENST00000397109 SLC16A2P36021 539 aa17.05■□□□□ 0.32
SEC13-208ENST00000397109 CCDC174Q6PII3 467 aa17.05■□□□□ 0.32
SEC13-208ENST00000397109 ENAHQ8N8S7 591 aaPredicted RBP17.05■□□□□ 0.32
SEC13-208ENST00000397109 PAWRQ96IZ0 340 aaKnown RBP17.05■□□□□ 0.32
SEC13-208ENST00000397109 AGBL1Q96MI9 1066 aa17.05■□□□□ 0.32
SEC13-208ENST00000397109 TINF2Q9BSI4 451 aa17.05■□□□□ 0.32
SEC13-208ENST00000397109 RANBP17Q9H2T7 1088 aaKnown RBP17.05■□□□□ 0.32
SEC13-208ENST00000397109 PLXNA1Q9UIW2 1896 aa17.05■□□□□ 0.32
SEC13-208ENST00000397109 TNKSO95271 1327 aa17.05■□□□□ 0.32
SEC13-208ENST00000397109 FRMPD2Q68DX3 1309 aaPredicted RBP17.05■□□□□ 0.32
SEC13-208ENST00000397109 ICAM1P05362 532 aa17.05■□□□□ 0.32
SEC13-208ENST00000397109 ALAS1P13196 640 aa17.05■□□□□ 0.32
SEC13-208ENST00000397109 CASC1Q6TDU7 716 aa17.05■□□□□ 0.32
SEC13-208ENST00000397109 ZNF467Q7Z7K2 595 aaPredicted RBP17.05■□□□□ 0.32
SEC13-208ENST00000397109 RALYLQ86SE5 291 aaKnown RBP17.05■□□□□ 0.32
SEC13-208ENST00000397109 TRPV1Q8NER1 839 aa17.05■□□□□ 0.32
SEC13-208ENST00000397109 NCOA7Q8NI08 942 aa17.05■□□□□ 0.32
SEC13-208ENST00000397109 DPF3Q92784 378 aa17.05■□□□□ 0.32
SEC13-208ENST00000397109 TRERF1Q96PN7 1200 aa17.05■□□□□ 0.32
SEC13-208ENST00000397109 HOMER2Q9NSB8 354 aa17.05■□□□□ 0.32
SEC13-208ENST00000397109 RNF146Q9NTX7 359 aa17.05■□□□□ 0.32
SEC13-208ENST00000397109 CCPG1Q9ULG6 757 aa17.05■□□□□ 0.32
SEC13-208ENST00000397109 RBM8AQ9Y5S9 174 aaKnown RBP17.05■□□□□ 0.32
SEC13-208ENST00000397109 SEPT4O43236 478 aa17.04■□□□□ 0.32
SEC13-208ENST00000397109 ASPRV1Q53RT3 343 aa17.04■□□□□ 0.32
SEC13-208ENST00000397109 IFIT1BQ5T764 474 aaKnown RBP17.04■□□□□ 0.32
SEC13-208ENST00000397109 SYNGAP1Q96PV0 1343 aa17.04■□□□□ 0.32
SEC13-208ENST00000397109 ERICH2A1L162 156 aa17.03■□□□□ 0.32
SEC13-208ENST00000397109 E7EWF7 191 aa17.03■□□□□ 0.32
SEC13-208ENST00000397109 SNAP25P60880 206 aa17.03■□□□□ 0.32
SEC13-208ENST00000397109 SART3Q15020 963 aaKnown RBP17.03■□□□□ 0.32
SEC13-208ENST00000397109 MAMDC4Q6UXC1 1216 aa17.03■□□□□ 0.32
SEC13-208ENST00000397109 CYB5R4Q7L1T6 521 aa17.03■□□□□ 0.32
SEC13-208ENST00000397109 LSG1Q9H089 658 aaKnown RBP17.03■□□□□ 0.32
SEC13-208ENST00000397109 CNPY2Q9Y2B0 182 aa17.03■□□□□ 0.32
SEC13-208ENST00000397109 PFASO15067 1338 aa17.03■□□□□ 0.32
SEC13-208ENST00000397109 POTEB2H3BUK9 544 aa17.02■□□□□ 0.32
SEC13-208ENST00000397109 MNX1P50219 401 aaPredicted RBP17.02■□□□□ 0.32
SEC13-208ENST00000397109 SEC23AQ15436 765 aa17.02■□□□□ 0.32
SEC13-208ENST00000397109 PRAMEF19Q5SWL8 479 aa17.02■□□□□ 0.32
SEC13-208ENST00000397109 DIS3LQ8TF46 1054 aaKnown RBP17.02■□□□□ 0.32
SEC13-208ENST00000397109 C11orf49Q9H6J7 331 aa17.02■□□□□ 0.32
SEC13-208ENST00000397109 NR2E3Q9Y5X4 410 aa17.02■□□□□ 0.32
SEC13-208ENST00000397109 CEP290O15078 2479 aa17.02■□□□□ 0.32
SEC13-208ENST00000397109 CDC45O75419 566 aa17.01■□□□□ 0.31
SEC13-208ENST00000397109 PARP1P09874 1014 aaKnown RBP17.01■□□□□ 0.31
SEC13-208ENST00000397109 ANP32AP39687 249 aaKnown RBP17.01■□□□□ 0.31
SEC13-208ENST00000397109 ARRDC4Q8NCT1 418 aa17.01■□□□□ 0.31
SEC13-208ENST00000397109 ANO2Q9NQ90 1003 aa17.01■□□□□ 0.31
SEC13-208ENST00000397109 A1CFQ9NQ94 594 aaKnown RBP17.01■□□□□ 0.31
SEC13-208ENST00000397109 WDR19Q8NEZ3 1342 aa17.01■□□□□ 0.31
SEC13-208ENST00000397109 SMCHD1A6NHR9 2005 aa17.01■□□□□ 0.31
SEC13-208ENST00000397109 IFIT3O14879 490 aaKnown RBP17■□□□□ 0.31
SEC13-208ENST00000397109 GOLGA8HP0CJ92 632 aa17■□□□□ 0.31
SEC13-208ENST00000397109 FAM133AQ8N9E0 248 aa17■□□□□ 0.31
SEC13-208ENST00000397109 EVI5O60447 810 aa16.99■□□□□ 0.31
SEC13-208ENST00000397109 C8orf34Q49A92 452 aa16.99■□□□□ 0.31
SEC13-208ENST00000397109 MUM1L1Q5H9M0 696 aa16.99■□□□□ 0.31
SEC13-208ENST00000397109 STOX1Q6ZVD7 989 aa16.99■□□□□ 0.31
SEC13-208ENST00000397109 MTA3Q9BTC8 594 aa16.99■□□□□ 0.31
SEC13-208ENST00000397109 UBA5Q9GZZ9 404 aa16.99■□□□□ 0.31
SEC13-208ENST00000397109 CYP39A1Q9NYL5 469 aa16.99■□□□□ 0.31
SEC13-208ENST00000397109 TAF6LQ9Y6J9 622 aa16.99■□□□□ 0.31
SEC13-208ENST00000397109 FRMPD3Q5JV73 1810 aa16.99■□□□□ 0.31
SEC13-208ENST00000397109 ASB14A6NK59 587 aa16.99■□□□□ 0.31
SEC13-208ENST00000397109 DNM1LO00429 736 aa16.99■□□□□ 0.31
SEC13-208ENST00000397109 SNAI1O95863 264 aaPredicted RBP16.99■□□□□ 0.31
SEC13-208ENST00000397109 ZNF865P0CJ78 1059 aaPredicted RBP16.99■□□□□ 0.31
SEC13-208ENST00000397109 RARBP10826 455 aa16.99■□□□□ 0.31
SEC13-208ENST00000397109 COL6A1P12109 1028 aa16.99■□□□□ 0.31
SEC13-208ENST00000397109 AKR1A1P14550 325 aa16.99■□□□□ 0.31
SEC13-208ENST00000397109 CNTN2Q02246 1040 aa16.99■□□□□ 0.31
SEC13-208ENST00000397109 WTAPQ15007 396 aa16.99■□□□□ 0.31
SEC13-208ENST00000397109 NECTIN1Q15223 517 aa16.99■□□□□ 0.31
SEC13-208ENST00000397109 RNF20Q5VTR2 975 aa16.99■□□□□ 0.31
SEC13-208ENST00000397109 NSMFQ6X4W1 530 aa16.99■□□□□ 0.31
SEC13-208ENST00000397109 ABHD16BQ9H3Z7 469 aa16.99■□□□□ 0.31
SEC13-208ENST00000397109 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.99■□□□□ 0.31
SEC13-208ENST00000397109 SLC27A2O14975 620 aa16.98■□□□□ 0.31
SEC13-208ENST00000397109 TAL1P17542 331 aaPredicted RBP16.98■□□□□ 0.31
SEC13-208ENST00000397109 TMEM67Q5HYA8 995 aa16.98■□□□□ 0.31
SEC13-208ENST00000397109 CREB3L3Q68CJ9 461 aa16.98■□□□□ 0.31
SEC13-208ENST00000397109 MB21D2Q8IYB1 491 aaPredicted RBP16.98■□□□□ 0.31
SEC13-208ENST00000397109 ADGRF4Q8IZF3 695 aa16.98■□□□□ 0.31
SEC13-208ENST00000397109 FGD4Q96M96 766 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms