RNA–Protein interactions for RNA: ENST00000397024.1

MCF2L-207, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5 BASIC

Gene MCF2L, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-207ENST00000397024 TOMM22Q9NS69 142 aa22.29■■□□□ 1.16
MCF2L-207ENST00000397024 FDX1P10109 184 aa22.28■■□□□ 1.16
MCF2L-207ENST00000397024 RARBP10826 455 aa22.28■■□□□ 1.16
MCF2L-207ENST00000397024 CNTN2Q02246 1040 aa22.28■■□□□ 1.16
MCF2L-207ENST00000397024 IKQ13123 557 aaPredicted RBP22.28■■□□□ 1.16
MCF2L-207ENST00000397024 UBE2OQ9C0C9 1292 aaKnown RBP22.28■■□□□ 1.16
MCF2L-207ENST00000397024 FBXO40Q9UH90 709 aa22.28■■□□□ 1.16
MCF2L-207ENST00000397024 PRR12Q9ULL5 1215 aa22.28■■□□□ 1.16
MCF2L-207ENST00000397024 CNPY2Q9Y2B0 182 aa22.28■■□□□ 1.16
MCF2L-207ENST00000397024 ATP11BQ9Y2G3 1177 aa22.28■■□□□ 1.16
MCF2L-207ENST00000397024 SYNGAP1Q96PV0 1343 aa22.28■■□□□ 1.16
MCF2L-207ENST00000397024 TTBK2Q6IQ55 1244 aa22.27■■□□□ 1.16
MCF2L-207ENST00000397024 ZNF467Q7Z7K2 595 aaPredicted RBP22.27■■□□□ 1.16
MCF2L-207ENST00000397024 MSL3Q8N5Y2 521 aaKnown RBP22.27■■□□□ 1.16
MCF2L-207ENST00000397024 ZMYM6O95789 1325 aa22.27■■□□□ 1.16
MCF2L-207ENST00000397024 MCM3APO60318 1980 aa22.27■■□□□ 1.15
MCF2L-207ENST00000397024 AKR1A1P14550 325 aa22.26■■□□□ 1.15
MCF2L-207ENST00000397024 CCDC174Q6PII3 467 aa22.26■■□□□ 1.15
MCF2L-207ENST00000397024 TBC1D10CQ8IV04 446 aa22.26■■□□□ 1.15
MCF2L-207ENST00000397024 TMEM47Q9BQJ4 181 aa22.26■■□□□ 1.15
MCF2L-207ENST00000397024 TCP11L1Q9NUJ3 509 aa22.26■■□□□ 1.15
MCF2L-207ENST00000397024 PHF24Q9UPV7 400 aa22.26■■□□□ 1.15
MCF2L-207ENST00000397024 ADCY6O43306 1168 aa22.25■■□□□ 1.15
MCF2L-207ENST00000397024 ADAMTS4O75173 837 aa22.25■■□□□ 1.15
MCF2L-207ENST00000397024 IRX5P78411 483 aaPredicted RBP22.25■■□□□ 1.15
MCF2L-207ENST00000397024 SNX17Q15036 470 aa22.25■■□□□ 1.15
MCF2L-207ENST00000397024 TRIM60Q495X7 471 aa22.25■■□□□ 1.15
MCF2L-207ENST00000397024 AKNAD1Q5T1N1 836 aa22.25■■□□□ 1.15
MCF2L-207ENST00000397024 CWC27Q6UX04 472 aaKnown RBP22.25■■□□□ 1.15
MCF2L-207ENST00000397024 TDHQ8IZJ6 230 aa22.25■■□□□ 1.15
MCF2L-207ENST00000397024 TRERF1Q96PN7 1200 aa22.25■■□□□ 1.15
MCF2L-207ENST00000397024 RNF146Q9NTX7 359 aa22.25■■□□□ 1.15
MCF2L-207ENST00000397024 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.25■■□□□ 1.15
MCF2L-207ENST00000397024 ZHX1Q9UKY1 873 aaPredicted RBP22.25■■□□□ 1.15
MCF2L-207ENST00000397024 TOP1P11387 765 aaKnown RBP22.24■■□□□ 1.15
MCF2L-207ENST00000397024 ALAS1P13196 640 aa22.24■■□□□ 1.15
MCF2L-207ENST00000397024 SLC16A2P36021 539 aa22.24■■□□□ 1.15
MCF2L-207ENST00000397024 ACVR2BQ13705 512 aa22.24■■□□□ 1.15
MCF2L-207ENST00000397024 CCDC96Q2M329 555 aa22.24■■□□□ 1.15
MCF2L-207ENST00000397024 MUM1L1Q5H9M0 696 aa22.24■■□□□ 1.15
MCF2L-207ENST00000397024 FAM133AQ8N9E0 248 aa22.24■■□□□ 1.15
MCF2L-207ENST00000397024 DCAF4Q8WV16 495 aa22.24■■□□□ 1.15
MCF2L-207ENST00000397024 ACAD9Q9H845 621 aa22.24■■□□□ 1.15
MCF2L-207ENST00000397024 A1CFQ9NQ94 594 aaKnown RBP22.24■■□□□ 1.15
MCF2L-207ENST00000397024 FAM184BQ9ULE4 1060 aa22.24■■□□□ 1.15
MCF2L-207ENST00000397024 SOWAHBA6NEL2 793 aa22.23■■□□□ 1.15
MCF2L-207ENST00000397024 POTEB2H3BUK9 544 aa22.23■■□□□ 1.15
MCF2L-207ENST00000397024 PDE4AP27815 886 aa22.23■■□□□ 1.15
MCF2L-207ENST00000397024 MFSD6Q6ZSS7 791 aa22.23■■□□□ 1.15
MCF2L-207ENST00000397024 ARMCX2Q7L311 632 aa22.23■■□□□ 1.15
MCF2L-207ENST00000397024 SH3RF1Q7Z6J0 888 aa22.23■■□□□ 1.15
MCF2L-207ENST00000397024 RNF180Q86T96 592 aa22.23■■□□□ 1.15
MCF2L-207ENST00000397024 CCDC144CPQ8IYA2 1237 aa22.23■■□□□ 1.15
MCF2L-207ENST00000397024 KATNBL1Q9H079 304 aa22.23■■□□□ 1.15
MCF2L-207ENST00000397024 GPCPD1Q9NPB8 672 aa22.23■■□□□ 1.15
MCF2L-207ENST00000397024 DDX49Q9Y6V7 483 aaKnown RBP22.23■■□□□ 1.15
MCF2L-207ENST00000397024 COL6A3P12111 3177 aa22.22■■□□□ 1.15
MCF2L-207ENST00000397024 TLE2Q04725 743 aa22.22■■□□□ 1.15
MCF2L-207ENST00000397024 TKFCQ3LXA3 575 aa22.22■■□□□ 1.15
MCF2L-207ENST00000397024 CCDC144BQ3MJ40 725 aa22.22■■□□□ 1.15
MCF2L-207ENST00000397024 LRIT3Q3SXY7 679 aa22.22■■□□□ 1.15
MCF2L-207ENST00000397024 BTNL9Q6UXG8 535 aa22.22■■□□□ 1.15
MCF2L-207ENST00000397024 KLHDC9Q8NEP7 349 aa22.22■■□□□ 1.15
MCF2L-207ENST00000397024 ABHD16BQ9H3Z7 469 aa22.22■■□□□ 1.15
MCF2L-207ENST00000397024 FRMPD2Q68DX3 1309 aaPredicted RBP22.22■■□□□ 1.15
MCF2L-207ENST00000397024 SYNRGQ9UMZ2 1314 aa22.22■■□□□ 1.15
MCF2L-207ENST00000397024 A0A1W2PQ45 241 aaPredicted RBP22.21■■□□□ 1.15
MCF2L-207ENST00000397024 A0A1W2PQY0 241 aa22.21■■□□□ 1.15
MCF2L-207ENST00000397024 TRIM43BA6NCK2 446 aa22.21■■□□□ 1.15
MCF2L-207ENST00000397024 MYADML2A6NDP7 307 aa22.21■■□□□ 1.15
MCF2L-207ENST00000397024 MFAP1P55081 439 aaKnown RBP22.21■■□□□ 1.15
MCF2L-207ENST00000397024 IRX6P78412 446 aaPredicted RBP22.21■■□□□ 1.15
MCF2L-207ENST00000397024 C1orf53Q5VUE5 145 aa22.21■■□□□ 1.15
MCF2L-207ENST00000397024 CCSAPQ6IQ19 270 aaPredicted RBP22.21■■□□□ 1.15
MCF2L-207ENST00000397024 TRIM43Q96BQ3 446 aaPredicted RBP22.21■■□□□ 1.15
MCF2L-207ENST00000397024 PURBQ96QR8 312 aaKnown RBP22.21■■□□□ 1.15
MCF2L-207ENST00000397024 LBHD1Q9BQE6 289 aaPredicted RBP22.21■■□□□ 1.15
MCF2L-207ENST00000397024 RANBP17Q9H2T7 1088 aaKnown RBP22.21■■□□□ 1.15
MCF2L-207ENST00000397024 DIAPH3Q9NSV4 1193 aa22.21■■□□□ 1.15
MCF2L-207ENST00000397024 ASTN1O14525 1302 aa22.21■■□□□ 1.15
MCF2L-207ENST00000397024 NEDD4P46934 1319 aa22.21■■□□□ 1.15
MCF2L-207ENST00000397024 DUSP11O75319 330 aaKnown RBP22.2■■□□□ 1.14
MCF2L-207ENST00000397024 PDHBP11177 359 aa22.2■■□□□ 1.14
MCF2L-207ENST00000397024 KCNA10Q16322 511 aa22.2■■□□□ 1.14
MCF2L-207ENST00000397024 SYDE2Q5VT97 1194 aa22.2■■□□□ 1.14
MCF2L-207ENST00000397024 TTC14Q96N46 770 aa22.2■■□□□ 1.14
MCF2L-207ENST00000397024 ZKSCAN3Q9BRR0 538 aa22.2■■□□□ 1.14
MCF2L-207ENST00000397024 TSEN34Q9BSV6 310 aaKnown RBP22.2■■□□□ 1.14
MCF2L-207ENST00000397024 IL25Q9H293 177 aa22.2■■□□□ 1.14
MCF2L-207ENST00000397024 PDLIM7Q9NR12 457 aa22.2■■□□□ 1.14
MCF2L-207ENST00000397024 PRKAG2Q9UGJ0 569 aa22.2■■□□□ 1.14
MCF2L-207ENST00000397024 CCPG1Q9ULG6 757 aa22.2■■□□□ 1.14
MCF2L-207ENST00000397024 ZNF213O14771 459 aa22.19■■□□□ 1.14
MCF2L-207ENST00000397024 ICAM1P05362 532 aa22.19■■□□□ 1.14
MCF2L-207ENST00000397024 PCP11498 1178 aaKnown RBP22.19■■□□□ 1.14
MCF2L-207ENST00000397024 ACLYP53396 1101 aa22.19■■□□□ 1.14
MCF2L-207ENST00000397024 PRDM5Q9NQX1 630 aaPredicted RBP22.19■■□□□ 1.14
MCF2L-207ENST00000397024 CYP39A1Q9NYL5 469 aa22.19■■□□□ 1.14
MCF2L-207ENST00000397024 LTBP2Q14767 1821 aa22.18■■□□□ 1.14
MCF2L-207ENST00000397024 RNF41Q9H4P4 317 aaPredicted RBP22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms