RNA–Protein interactions for RNA: ENST00000396854.8

TM9SF1-202, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM9SF1, Length 2,055 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-202ENST00000396854 V9GY48 417 aaPredicted RBP17.08■□□□□ 0.32
TM9SF1-202ENST00000396854 COL11A1P12107 1806 aaPredicted RBP17.07■□□□□ 0.32
TM9SF1-202ENST00000396854 A0A0G2JMZ2 1700 aa17.07■□□□□ 0.32
TM9SF1-202ENST00000396854 TMEM88BA6NKF7 163 aa17.07■□□□□ 0.32
TM9SF1-202ENST00000396854 SNAPC2Q13487 334 aa17.07■□□□□ 0.32
TM9SF1-202ENST00000396854 UVSSAQ2YD98 709 aa17.07■□□□□ 0.32
TM9SF1-202ENST00000396854 SPRYD7Q5W111 196 aa17.07■□□□□ 0.32
TM9SF1-202ENST00000396854 RGS22Q8NE09 1264 aa17.07■□□□□ 0.32
TM9SF1-202ENST00000396854 RRP36Q96EU6 259 aaKnown RBP17.07■□□□□ 0.32
TM9SF1-202ENST00000396854 MOGSQ13724 837 aa17.06■□□□□ 0.32
TM9SF1-202ENST00000396854 PFKFB3Q16875 520 aaPredicted RBP17.06■□□□□ 0.32
TM9SF1-202ENST00000396854 CSPP1Q1MSJ5 1256 aa17.06■□□□□ 0.32
TM9SF1-202ENST00000396854 HHIPL1Q96JK4 782 aa17.06■□□□□ 0.32
TM9SF1-202ENST00000396854 ALG1Q9BT22 464 aa17.06■□□□□ 0.32
TM9SF1-202ENST00000396854 PRR12Q9ULL5 1215 aa17.06■□□□□ 0.32
TM9SF1-202ENST00000396854 SCG2P13521 617 aa17.06■□□□□ 0.32
TM9SF1-202ENST00000396854 TERF1P54274 439 aa17.06■□□□□ 0.32
TM9SF1-202ENST00000396854 IKQ13123 557 aaPredicted RBP17.06■□□□□ 0.32
TM9SF1-202ENST00000396854 LARP1BQ659C4 914 aaKnown RBP17.06■□□□□ 0.32
TM9SF1-202ENST00000396854 RGMBQ6NW40 437 aa17.06■□□□□ 0.32
TM9SF1-202ENST00000396854 FASTKD5Q7L8L6 764 aaKnown RBP17.06■□□□□ 0.32
TM9SF1-202ENST00000396854 RASAL3Q86YV0 1011 aa17.06■□□□□ 0.32
TM9SF1-202ENST00000396854 PIGSQ96S52 555 aa17.06■□□□□ 0.32
TM9SF1-202ENST00000396854 TANGO6Q9C0B7 1094 aa17.06■□□□□ 0.32
TM9SF1-202ENST00000396854 hCG_1642624A0A1W2PR95 340 aa17.05■□□□□ 0.32
TM9SF1-202ENST00000396854 GTF2A2P52657 109 aa17.05■□□□□ 0.32
TM9SF1-202ENST00000396854 CATSPERGQ6ZRH7 1159 aa17.05■□□□□ 0.32
TM9SF1-202ENST00000396854 MS4A4AQ96JQ5 239 aa17.05■□□□□ 0.32
TM9SF1-202ENST00000396854 AIFM3Q96NN9 605 aa17.05■□□□□ 0.32
TM9SF1-202ENST00000396854 SLF1Q9BQI6 1058 aa17.05■□□□□ 0.32
TM9SF1-202ENST00000396854 VAT1LQ9HCJ6 419 aa17.05■□□□□ 0.32
TM9SF1-202ENST00000396854 FBXO28Q9NVF7 368 aa17.05■□□□□ 0.32
TM9SF1-202ENST00000396854 SEC63Q9UGP8 760 aaKnown RBP17.05■□□□□ 0.32
TM9SF1-202ENST00000396854 MYPNQ86TC9 1320 aa17.05■□□□□ 0.32
TM9SF1-202ENST00000396854 USP17L15C9J2P7 530 aa17.05■□□□□ 0.32
TM9SF1-202ENST00000396854 USP17L13C9JLJ4 530 aa17.05■□□□□ 0.32
TM9SF1-202ENST00000396854 USP17L11C9JVI0 530 aa17.05■□□□□ 0.32
TM9SF1-202ENST00000396854 USP17L18D6R9N7 530 aa17.05■□□□□ 0.32
TM9SF1-202ENST00000396854 USP17L22D6RA61 530 aa17.05■□□□□ 0.32
TM9SF1-202ENST00000396854 USP17L17D6RBQ6 530 aa17.05■□□□□ 0.32
TM9SF1-202ENST00000396854 USP17L19D6RCP7 530 aa17.05■□□□□ 0.32
TM9SF1-202ENST00000396854 USP17L20D6RJB6 530 aa17.05■□□□□ 0.32
TM9SF1-202ENST00000396854 ZBTB5O15062 677 aa17.05■□□□□ 0.32
TM9SF1-202ENST00000396854 HOXA7P31268 230 aaPredicted RBP17.05■□□□□ 0.32
TM9SF1-202ENST00000396854 USP17L24Q0WX57 530 aa17.05■□□□□ 0.32
TM9SF1-202ENST00000396854 TREML2Q5T2D2 321 aa17.05■□□□□ 0.32
TM9SF1-202ENST00000396854 GADL1Q6ZQY3 521 aa17.05■□□□□ 0.32
TM9SF1-202ENST00000396854 HOMER1Q86YM7 354 aa17.05■□□□□ 0.32
TM9SF1-202ENST00000396854 PRPF38AQ8NAV1 312 aaKnown RBP17.05■□□□□ 0.32
TM9SF1-202ENST00000396854 RANBP17Q9H2T7 1088 aaKnown RBP17.05■□□□□ 0.32
TM9SF1-202ENST00000396854 PPP1R9AQ9ULJ8 1098 aa17.05■□□□□ 0.32
TM9SF1-202ENST00000396854 AGTPBP1Q9UPW5 1226 aa17.05■□□□□ 0.32
TM9SF1-202ENST00000396854 PNMA6FA0A0J9YX94 578 aa17.04■□□□□ 0.32
TM9SF1-202ENST00000396854 hCG_1984214I3L0E3 225 aa17.04■□□□□ 0.32
TM9SF1-202ENST00000396854 FLOT1O75955 427 aa17.04■□□□□ 0.32
TM9SF1-202ENST00000396854 ZNF157P51786 506 aaPredicted RBP17.04■□□□□ 0.32
TM9SF1-202ENST00000396854 ZNF713Q8N859 430 aaPredicted RBP17.04■□□□□ 0.32
TM9SF1-202ENST00000396854 C8orf76Q96K31 380 aa17.04■□□□□ 0.32
TM9SF1-202ENST00000396854 VPS37CA5D8V6 355 aaPredicted RBP17.03■□□□□ 0.32
TM9SF1-202ENST00000396854 CETPP11597 493 aa17.03■□□□□ 0.32
TM9SF1-202ENST00000396854 CDC37Q16543 378 aaPredicted RBP17.03■□□□□ 0.32
TM9SF1-202ENST00000396854 FAM177A1Q8N128 213 aaPredicted RBP17.03■□□□□ 0.32
TM9SF1-202ENST00000396854 PIBF1Q8WXW3 757 aa17.03■□□□□ 0.32
TM9SF1-202ENST00000396854 KIFC2Q96AC6 838 aa17.03■□□□□ 0.32
TM9SF1-202ENST00000396854 SLC10A3P09131 477 aa17.03■□□□□ 0.32
TM9SF1-202ENST00000396854 FDX1P10109 184 aa17.03■□□□□ 0.32
TM9SF1-202ENST00000396854 QRICH1Q2TAL8 776 aa17.03■□□□□ 0.32
TM9SF1-202ENST00000396854 FBXO18Q8NFZ0 1043 aa17.03■□□□□ 0.32
TM9SF1-202ENST00000396854 SH3GLB2Q9NR46 395 aa17.03■□□□□ 0.32
TM9SF1-202ENST00000396854 BARHL2Q9NY43 387 aa17.03■□□□□ 0.32
TM9SF1-202ENST00000396854 ABT1Q9ULW3 272 aaKnown RBP17.03■□□□□ 0.32
TM9SF1-202ENST00000396854 XBP1P17861 261 aa17.02■□□□□ 0.32
TM9SF1-202ENST00000396854 DSG3P32926 999 aa17.02■□□□□ 0.32
TM9SF1-202ENST00000396854 COG2Q14746 738 aa17.02■□□□□ 0.32
TM9SF1-202ENST00000396854 WWC2Q6AWC2 1192 aa17.02■□□□□ 0.32
TM9SF1-202ENST00000396854 GPAT2Q6NUI2 795 aa17.02■□□□□ 0.32
TM9SF1-202ENST00000396854 SHISA4Q96DD7 197 aa17.02■□□□□ 0.32
TM9SF1-202ENST00000396854 ADAMTS5Q9UNA0 930 aa17.02■□□□□ 0.32
TM9SF1-202ENST00000396854 RBBP6Q7Z6E9 1792 aaKnown RBP17.02■□□□□ 0.32
TM9SF1-202ENST00000396854 SMCHD1A6NHR9 2005 aa17.02■□□□□ 0.32
TM9SF1-202ENST00000396854 FIBPO43427 364 aa17.01■□□□□ 0.31
TM9SF1-202ENST00000396854 PPP1R11O60927 126 aaPredicted RBP17.01■□□□□ 0.31
TM9SF1-202ENST00000396854 PABPC4Q13310 644 aaKnown RBP eCLIP17.01■□□□□ 0.31
TM9SF1-202ENST00000396854 CCDC102AQ96A19 550 aa17.01■□□□□ 0.31
TM9SF1-202ENST00000396854 GJB4Q9NTQ9 266 aa17.01■□□□□ 0.31
TM9SF1-202ENST00000396854 SLC45A1Q9Y2W3 748 aa17.01■□□□□ 0.31
TM9SF1-202ENST00000396854 CCL15-CCL14A0A0B4J2E2 113 aa17.01■□□□□ 0.31
TM9SF1-202ENST00000396854 TESPA1A2RU30 521 aaPredicted RBP17.01■□□□□ 0.31
TM9SF1-202ENST00000396854 FAM155AB1AL88 458 aaPredicted RBP17.01■□□□□ 0.31
TM9SF1-202ENST00000396854 STXBP3O00186 592 aa17.01■□□□□ 0.31
TM9SF1-202ENST00000396854 APLP1P51693 650 aa17.01■□□□□ 0.31
TM9SF1-202ENST00000396854 MKRN3Q13064 507 aaKnown RBP17.01■□□□□ 0.31
TM9SF1-202ENST00000396854 TRIM29Q14134 588 aa17.01■□□□□ 0.31
TM9SF1-202ENST00000396854 CCL15Q16663 113 aa17.01■□□□□ 0.31
TM9SF1-202ENST00000396854 KRT40Q6A162 431 aa17.01■□□□□ 0.31
TM9SF1-202ENST00000396854 GPKOWQ92917 476 aaPredicted RBP eCLIP17.01■□□□□ 0.31
TM9SF1-202ENST00000396854 SLC38A10Q9HBR0 1119 aa17.01■□□□□ 0.31
TM9SF1-202ENST00000396854 CREBZFQ9NS37 354 aa17.01■□□□□ 0.31
TM9SF1-202ENST00000396854 VPS54Q9P1Q0 977 aa17.01■□□□□ 0.31
TM9SF1-202ENST00000396854 H3BQV1 296 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms