RNA–Protein interactions for RNA: ENST00000395840.6

RAE1-202, Transcript of ribonucleic acid export 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAE1, Length 2,602 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1-202ENST00000395840 ECM29Q5VYK3 1845 aa10.19□□□□□ -0.78
RAE1-202ENST00000395840 GPR75-ASB3A0A0A6YYF3 556 aa10.19□□□□□ -0.78
RAE1-202ENST00000395840 GOLGA6L9A6NEM1 432 aa10.19□□□□□ -0.78
RAE1-202ENST00000395840 ARHGAP6O43182 974 aa10.19□□□□□ -0.78
RAE1-202ENST00000395840 NPM3O75607 178 aaKnown RBP10.19□□□□□ -0.78
RAE1-202ENST00000395840 HIRAP54198 1017 aaPredicted RBP10.19□□□□□ -0.78
RAE1-202ENST00000395840 ACTN3Q08043 901 aaPredicted RBP10.19□□□□□ -0.78
RAE1-202ENST00000395840 DPCR1Q3MIW9 517 aa10.19□□□□□ -0.78
RAE1-202ENST00000395840 SPDYE2Q495Y8 402 aa10.19□□□□□ -0.78
RAE1-202ENST00000395840 WLSQ5T9L3 541 aa10.19□□□□□ -0.78
RAE1-202ENST00000395840 CCDC73Q6ZRK6 1079 aa10.19□□□□□ -0.78
RAE1-202ENST00000395840 AMOTL1Q8IY63 956 aa10.19□□□□□ -0.78
RAE1-202ENST00000395840 CNTROBQ8N137 903 aa10.19□□□□□ -0.78
RAE1-202ENST00000395840 KBTBD3Q8NAB2 608 aa10.19□□□□□ -0.78
RAE1-202ENST00000395840 PI4K2BQ8TCG2 481 aa10.19□□□□□ -0.78
RAE1-202ENST00000395840 RIN2Q8WYP3 895 aaPredicted RBP10.19□□□□□ -0.78
RAE1-202ENST00000395840 GBP3Q9H0R5 595 aa10.19□□□□□ -0.78
RAE1-202ENST00000395840 SPATS2LQ9NUQ6 558 aaKnown RBP10.19□□□□□ -0.78
RAE1-202ENST00000395840 SAMM50Q9Y512 469 aa10.19□□□□□ -0.78
RAE1-202ENST00000395840 RFX7Q2KHR2 1363 aa10.18□□□□□ -0.78
RAE1-202ENST00000395840 A0A1B0GUA9 196 aa10.18□□□□□ -0.78
RAE1-202ENST00000395840 SHTN1A0MZ66 631 aa10.18□□□□□ -0.78
RAE1-202ENST00000395840 MYBL2P10244 700 aa10.18□□□□□ -0.78
RAE1-202ENST00000395840 PPP4CP60510 307 aa10.18□□□□□ -0.78
RAE1-202ENST00000395840 KARSQ15046 597 aaKnown RBP10.18□□□□□ -0.78
RAE1-202ENST00000395840 UBE3CQ15386 1083 aa10.18□□□□□ -0.78
RAE1-202ENST00000395840 PTPN21Q16825 1174 aa10.18□□□□□ -0.78
RAE1-202ENST00000395840 PI16Q6UXB8 463 aa10.18□□□□□ -0.78
RAE1-202ENST00000395840 FAM83AQ86UY5 434 aa10.18□□□□□ -0.78
RAE1-202ENST00000395840 CCDC26Q8TAB7 109 aa10.18□□□□□ -0.78
RAE1-202ENST00000395840 THOC1Q96FV9 657 aaKnown RBP10.18□□□□□ -0.78
RAE1-202ENST00000395840 BAG1Q99933 345 aaPredicted RBP10.18□□□□□ -0.78
RAE1-202ENST00000395840 ZSWIM6Q9HCJ5 1215 aa10.18□□□□□ -0.78
RAE1-202ENST00000395840 PIH1D3Q9NQM4 214 aaKnown RBP10.18□□□□□ -0.78
RAE1-202ENST00000395840 DAGLAQ9Y4D2 1042 aa10.18□□□□□ -0.78
RAE1-202ENST00000395840 DOCK2Q92608 1830 aa10.18□□□□□ -0.78
RAE1-202ENST00000395840 HIP1O00291 1037 aa10.18□□□□□ -0.78
RAE1-202ENST00000395840 AP1G2O75843 785 aa10.18□□□□□ -0.78
RAE1-202ENST00000395840 IPO7O95373 1038 aaKnown RBP10.18□□□□□ -0.78
RAE1-202ENST00000395840 GCKP35557 465 aa10.18□□□□□ -0.78
RAE1-202ENST00000395840 FANCCQ00597 558 aa10.18□□□□□ -0.78
RAE1-202ENST00000395840 ANGEL2Q5VTE6 544 aaKnown RBP10.18□□□□□ -0.78
RAE1-202ENST00000395840 APOBEC3HQ6NTF7 200 aaKnown RBP10.18□□□□□ -0.78
RAE1-202ENST00000395840 KRT26Q7Z3Y9 468 aa10.18□□□□□ -0.78
RAE1-202ENST00000395840 PRMT6Q96LA8 375 aaPredicted RBP10.18□□□□□ -0.78
RAE1-202ENST00000395840 IRX2Q9BZI1 471 aaPredicted RBP10.18□□□□□ -0.78
RAE1-202ENST00000395840 KLC4Q9NSK0 619 aa10.18□□□□□ -0.78
RAE1-202ENST00000395840 GGA3Q9NZ52 723 aa10.18□□□□□ -0.78
RAE1-202ENST00000395840 CPSF2Q9P2I0 782 aaKnown RBP10.18□□□□□ -0.78
RAE1-202ENST00000395840 ZNF70Q9UC06 446 aaPredicted RBP10.18□□□□□ -0.78
RAE1-202ENST00000395840 FSBPO95073 299 aa10.17□□□□□ -0.78
RAE1-202ENST00000395840 ATP1A3P13637 1013 aa10.17□□□□□ -0.78
RAE1-202ENST00000395840 CYP7A1P22680 504 aa10.17□□□□□ -0.78
RAE1-202ENST00000395840 AARSP49588 968 aaKnown RBP eCLIP10.17□□□□□ -0.78
RAE1-202ENST00000395840 SLC9C2Q5TAH2 1124 aa10.17□□□□□ -0.78
RAE1-202ENST00000395840 TOGARAM2Q6ZUX3 1019 aa10.17□□□□□ -0.78
RAE1-202ENST00000395840 CEP57Q86XR8 500 aa10.17□□□□□ -0.78
RAE1-202ENST00000395840 TMEM139Q8IV31 216 aa10.17□□□□□ -0.78
RAE1-202ENST00000395840 OTUD6BQ8N6M0 293 aa10.17□□□□□ -0.78
RAE1-202ENST00000395840 MAGEB6Q8N7X4 407 aa10.17□□□□□ -0.78
RAE1-202ENST00000395840 NUCKS1Q9H1E3 243 aaKnown RBP10.17□□□□□ -0.78
RAE1-202ENST00000395840 KIF9Q9HAQ2 790 aa10.17□□□□□ -0.78
RAE1-202ENST00000395840 CFAP45Q9UL16 551 aa10.17□□□□□ -0.78
RAE1-202ENST00000395840 GRIK5Q16478 980 aa10.17□□□□□ -0.78
RAE1-202ENST00000395840 SUPT20HL1Q3ZLR7 823 aa10.17□□□□□ -0.78
RAE1-202ENST00000395840 CEP85LQ5SZL2 805 aa10.17□□□□□ -0.78
RAE1-202ENST00000395840 CENPHQ9H3R5 247 aa10.17□□□□□ -0.78
RAE1-202ENST00000395840 USP40Q9NVE5 1235 aa10.17□□□□□ -0.78
RAE1-202ENST00000395840 MYH2Q9UKX2 1941 aa10.16□□□□□ -0.78
RAE1-202ENST00000395840 ENTPD3O75355 529 aa10.16□□□□□ -0.78
RAE1-202ENST00000395840 KIAA0754O94854 1291 aa10.16□□□□□ -0.78
RAE1-202ENST00000395840 BTDP43251 543 aa10.16□□□□□ -0.78
RAE1-202ENST00000395840 RESTQ13127 1097 aa10.16□□□□□ -0.78
RAE1-202ENST00000395840 NAA25Q14CX7 972 aa10.16□□□□□ -0.78
RAE1-202ENST00000395840 DIXDC1Q155Q3 683 aa10.16□□□□□ -0.78
RAE1-202ENST00000395840 FAM210AQ96ND0 272 aa10.16□□□□□ -0.78
RAE1-202ENST00000395840 SDF4Q9BRK5 362 aa10.16□□□□□ -0.78
RAE1-202ENST00000395840 IDI2Q9BXS1 227 aa10.16□□□□□ -0.78
RAE1-202ENST00000395840 FTOQ9C0B1 505 aaKnown RBP eCLIP10.16□□□□□ -0.78
RAE1-202ENST00000395840 DDX20Q9UHI6 824 aaKnown RBP10.16□□□□□ -0.78
RAE1-202ENST00000395840 CDC23Q9UJX2 597 aa10.16□□□□□ -0.78
RAE1-202ENST00000395840 CLSTN1O94985 981 aa10.16□□□□□ -0.78
RAE1-202ENST00000395840 ZNF202O95125 648 aa10.16□□□□□ -0.78
RAE1-202ENST00000395840 TFRCP02786 760 aaKnown RBP10.16□□□□□ -0.78
RAE1-202ENST00000395840 PDE6AP16499 860 aa10.16□□□□□ -0.78
RAE1-202ENST00000395840 ADD2P35612 726 aa10.16□□□□□ -0.78
RAE1-202ENST00000395840 FKBP1BP68106 108 aa10.16□□□□□ -0.78
RAE1-202ENST00000395840 FAM160A1Q05DH4 1040 aa10.16□□□□□ -0.78
RAE1-202ENST00000395840 ZNF513Q8N8E2 541 aaPredicted RBP10.16□□□□□ -0.78
RAE1-202ENST00000395840 ENGASEQ8NFI3 743 aa10.16□□□□□ -0.78
RAE1-202ENST00000395840 FAM76AQ8TAV0 307 aa10.16□□□□□ -0.78
RAE1-202ENST00000395840 MICAL1Q8TDZ2 1067 aa10.16□□□□□ -0.78
RAE1-202ENST00000395840 PARD3BQ8TEW8 1205 aa10.16□□□□□ -0.78
RAE1-202ENST00000395840 DESI2Q9BSY9 194 aa10.16□□□□□ -0.78
RAE1-202ENST00000395840 FSD1Q9BTV5 496 aa10.16□□□□□ -0.78
RAE1-202ENST00000395840 TDRD3Q9H7E2 651 aaKnown RBP10.16□□□□□ -0.78
RAE1-202ENST00000395840 VIPAS39Q9H9C1 493 aa10.16□□□□□ -0.78
RAE1-202ENST00000395840 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.16□□□□□ -0.78
RAE1-202ENST00000395840 UNCXA6NJT0 531 aa10.15□□□□□ -0.78
RAE1-202ENST00000395840 BIN1O00499 593 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms