RNA–Protein interactions for RNA: ENST00000395795.5

CXCL12-206, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 404 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-206ENST00000395795 CNTN2Q02246 1040 aa19.13■□□□□ 0.65
CXCL12-206ENST00000395795 AKNAD1Q5T1N1 836 aa19.13■□□□□ 0.65
CXCL12-206ENST00000395795 CHURC1Q8WUH1 139 aa19.13■□□□□ 0.65
CXCL12-206ENST00000395795 LRCH3Q96II8 777 aa19.13■□□□□ 0.65
CXCL12-206ENST00000395795 PHF24Q9UPV7 400 aa19.13■□□□□ 0.65
CXCL12-206ENST00000395795 NEDD4P46934 1319 aa19.13■□□□□ 0.65
CXCL12-206ENST00000395795 DNAH12Q6ZR08 3092 aa19.13■□□□□ 0.65
CXCL12-206ENST00000395795 MCM3APO60318 1980 aa19.12■□□□□ 0.65
CXCL12-206ENST00000395795 LCTP09848 1927 aa19.12■□□□□ 0.65
CXCL12-206ENST00000395795 PGK1P00558 417 aa19.12■□□□□ 0.65
CXCL12-206ENST00000395795 GSPT1P15170 499 aaKnown RBP19.12■□□□□ 0.65
CXCL12-206ENST00000395795 ADCYAP1R1P41586 468 aa19.12■□□□□ 0.65
CXCL12-206ENST00000395795 SLC4A3P48751 1232 aa19.12■□□□□ 0.65
CXCL12-206ENST00000395795 MUM1L1Q5H9M0 696 aa19.12■□□□□ 0.65
CXCL12-206ENST00000395795 PPP4R3BQ5MIZ7 849 aa19.12■□□□□ 0.65
CXCL12-206ENST00000395795 CCSAPQ6IQ19 270 aaPredicted RBP19.12■□□□□ 0.65
CXCL12-206ENST00000395795 DDX11Q96FC9 970 aa19.12■□□□□ 0.65
CXCL12-206ENST00000395795 A1CFQ9NQ94 594 aaKnown RBP19.12■□□□□ 0.65
CXCL12-206ENST00000395795 XPNPEP3Q9NQH7 507 aa19.12■□□□□ 0.65
CXCL12-206ENST00000395795 FBXO40Q9UH90 709 aa19.12■□□□□ 0.65
CXCL12-206ENST00000395795 SOWAHBA6NEL2 793 aa19.11■□□□□ 0.65
CXCL12-206ENST00000395795 SNHG28P0DPA3 235 aa19.11■□□□□ 0.65
CXCL12-206ENST00000395795 TOP1P11387 765 aaKnown RBP19.11■□□□□ 0.65
CXCL12-206ENST00000395795 RRP12Q5JTH9 1297 aaKnown RBP19.11■□□□□ 0.65
CXCL12-206ENST00000395795 C1orf53Q5VUE5 145 aa19.11■□□□□ 0.65
CXCL12-206ENST00000395795 CWC27Q6UX04 472 aaKnown RBP19.11■□□□□ 0.65
CXCL12-206ENST00000395795 KLHDC9Q8NEP7 349 aa19.11■□□□□ 0.65
CXCL12-206ENST00000395795 DCAF4Q8WV16 495 aa19.11■□□□□ 0.65
CXCL12-206ENST00000395795 RANBP17Q9H2T7 1088 aaKnown RBP19.11■□□□□ 0.65
CXCL12-206ENST00000395795 HOMER2Q9NSB8 354 aa19.11■□□□□ 0.65
CXCL12-206ENST00000395795 RNF146Q9NTX7 359 aa19.11■□□□□ 0.65
CXCL12-206ENST00000395795 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.11■□□□□ 0.65
CXCL12-206ENST00000395795 DDX49Q9Y6V7 483 aaKnown RBP19.11■□□□□ 0.65
CXCL12-206ENST00000395795 LTBP2Q14767 1821 aa19.11■□□□□ 0.65
CXCL12-206ENST00000395795 LAMA4Q16363 1823 aa19.11■□□□□ 0.65
CXCL12-206ENST00000395795 MYADML2A6NDP7 307 aa19.1■□□□□ 0.65
CXCL12-206ENST00000395795 KBTBD13C9JR72 458 aa19.1■□□□□ 0.65
CXCL12-206ENST00000395795 CTAGE5O15320 804 aa19.1■□□□□ 0.65
CXCL12-206ENST00000395795 RARBP10826 455 aa19.1■□□□□ 0.65
CXCL12-206ENST00000395795 PDHBP11177 359 aa19.1■□□□□ 0.65
CXCL12-206ENST00000395795 AKR1A1P14550 325 aa19.1■□□□□ 0.65
CXCL12-206ENST00000395795 SLC16A2P36021 539 aa19.1■□□□□ 0.65
CXCL12-206ENST00000395795 TRIM60Q495X7 471 aa19.1■□□□□ 0.65
CXCL12-206ENST00000395795 ANKRD35Q8N283 1001 aa19.1■□□□□ 0.65
CXCL12-206ENST00000395795 FERMT2Q96AC1 680 aa19.1■□□□□ 0.65
CXCL12-206ENST00000395795 ACAD9Q9H845 621 aa19.1■□□□□ 0.65
CXCL12-206ENST00000395795 SYNRGQ9UMZ2 1314 aa19.09■□□□□ 0.65
CXCL12-206ENST00000395795 PCP11498 1178 aaKnown RBP19.09■□□□□ 0.65
CXCL12-206ENST00000395795 IRX6P78412 446 aaPredicted RBP19.09■□□□□ 0.65
CXCL12-206ENST00000395795 MDM2Q00987 491 aaPredicted RBP19.09■□□□□ 0.65
CXCL12-206ENST00000395795 ACVR2BQ13705 512 aa19.09■□□□□ 0.65
CXCL12-206ENST00000395795 TKFCQ3LXA3 575 aa19.09■□□□□ 0.65
CXCL12-206ENST00000395795 CCDC174Q6PII3 467 aa19.09■□□□□ 0.65
CXCL12-206ENST00000395795 ARMCX2Q7L311 632 aa19.09■□□□□ 0.65
CXCL12-206ENST00000395795 TRERF1Q96PN7 1200 aa19.09■□□□□ 0.65
CXCL12-206ENST00000395795 MTMR7Q9Y216 660 aa19.09■□□□□ 0.65
CXCL12-206ENST00000395795 CNPY2Q9Y2B0 182 aa19.09■□□□□ 0.65
CXCL12-206ENST00000395795 FRMPD2Q68DX3 1309 aaPredicted RBP19.08■□□□□ 0.65
CXCL12-206ENST00000395795 LRIT3Q3SXY7 679 aa19.08■□□□□ 0.64
CXCL12-206ENST00000395795 MFSD6Q6ZSS7 791 aa19.08■□□□□ 0.64
CXCL12-206ENST00000395795 SH3RF1Q7Z6J0 888 aa19.08■□□□□ 0.64
CXCL12-206ENST00000395795 CCDC144CPQ8IYA2 1237 aa19.08■□□□□ 0.64
CXCL12-206ENST00000395795 TTC14Q96N46 770 aa19.08■□□□□ 0.64
CXCL12-206ENST00000395795 PURBQ96QR8 312 aaKnown RBP19.08■□□□□ 0.64
CXCL12-206ENST00000395795 DSCC1Q9BVC3 393 aa19.08■□□□□ 0.64
CXCL12-206ENST00000395795 PDLIM7Q9NR12 457 aa19.08■□□□□ 0.64
CXCL12-206ENST00000395795 TOMM22Q9NS69 142 aa19.08■□□□□ 0.64
CXCL12-206ENST00000395795 LRRC37A2A6NM11 1700 aa19.08■□□□□ 0.64
CXCL12-206ENST00000395795 TRIM43BA6NCK2 446 aa19.07■□□□□ 0.64
CXCL12-206ENST00000395795 ICAM1P05362 532 aa19.07■□□□□ 0.64
CXCL12-206ENST00000395795 ALAS1P13196 640 aa19.07■□□□□ 0.64
CXCL12-206ENST00000395795 ITGB8P26012 769 aa19.07■□□□□ 0.64
CXCL12-206ENST00000395795 NKX3-2P78367 333 aa19.07■□□□□ 0.64
CXCL12-206ENST00000395795 ZNF543Q08ER8 600 aa19.07■□□□□ 0.64
CXCL12-206ENST00000395795 TTC22Q5TAA0 569 aa19.07■□□□□ 0.64
CXCL12-206ENST00000395795 SYDE2Q5VT97 1194 aa19.07■□□□□ 0.64
CXCL12-206ENST00000395795 TDHQ8IZJ6 230 aa19.07■□□□□ 0.64
CXCL12-206ENST00000395795 ANKS1AQ92625 1134 aa19.07■□□□□ 0.64
CXCL12-206ENST00000395795 TRIM43Q96BQ3 446 aaPredicted RBP19.07■□□□□ 0.64
CXCL12-206ENST00000395795 UBE2OQ9C0C9 1292 aaKnown RBP19.07■□□□□ 0.64
CXCL12-206ENST00000395795 UPF3AQ9H1J1 476 aaKnown RBP19.07■□□□□ 0.64
CXCL12-206ENST00000395795 ABHD16BQ9H3Z7 469 aa19.07■□□□□ 0.64
CXCL12-206ENST00000395795 CYP39A1Q9NYL5 469 aa19.07■□□□□ 0.64
CXCL12-206ENST00000395795 ZHX1Q9UKY1 873 aaPredicted RBP19.07■□□□□ 0.64
CXCL12-206ENST00000395795 FAM184BQ9ULE4 1060 aa19.07■□□□□ 0.64
CXCL12-206ENST00000395795 ATP11BQ9Y2G3 1177 aa19.07■□□□□ 0.64
CXCL12-206ENST00000395795 CTDP1Q9Y5B0 961 aaPredicted RBP19.07■□□□□ 0.64
CXCL12-206ENST00000395795 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.06■□□□□ 0.64
CXCL12-206ENST00000395795 A0A1W2PQ45 241 aaPredicted RBP19.06■□□□□ 0.64
CXCL12-206ENST00000395795 A0A1W2PQY0 241 aa19.06■□□□□ 0.64
CXCL12-206ENST00000395795 POTEB2H3BUK9 544 aa19.06■□□□□ 0.64
CXCL12-206ENST00000395795 DUSP11O75319 330 aaKnown RBP19.06■□□□□ 0.64
CXCL12-206ENST00000395795 MYCNP04198 464 aaPredicted RBP19.06■□□□□ 0.64
CXCL12-206ENST00000395795 PTGS1P23219 599 aa19.06■□□□□ 0.64
CXCL12-206ENST00000395795 CST5P28325 142 aaPredicted RBP19.06■□□□□ 0.64
CXCL12-206ENST00000395795 MFAP1P55081 439 aaKnown RBP19.06■□□□□ 0.64
CXCL12-206ENST00000395795 IKQ13123 557 aaPredicted RBP19.06■□□□□ 0.64
CXCL12-206ENST00000395795 CCDC96Q2M329 555 aa19.06■□□□□ 0.64
CXCL12-206ENST00000395795 CCDC144BQ3MJ40 725 aa19.06■□□□□ 0.64
CXCL12-206ENST00000395795 MORC4Q8TE76 937 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms