RNA–Protein interactions for RNA: ENST00000395205.6

BBS4-202, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best) BASIC

Gene BBS4, Length 2,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-202ENST00000395205 TMEM87AQ8NBN3 555 aa11.33□□□□□ -0.6
BBS4-202ENST00000395205 TANGO6Q9C0B7 1094 aa11.33□□□□□ -0.6
BBS4-202ENST00000395205 ZMYND12Q9H0C1 365 aa11.33□□□□□ -0.6
BBS4-202ENST00000395205 ELP3Q9H9T3 547 aa11.33□□□□□ -0.6
BBS4-202ENST00000395205 RTEL1Q9NZ71 1219 aa11.33□□□□□ -0.6
BBS4-202ENST00000395205 TMOD4Q9NZQ9 345 aa11.33□□□□□ -0.6
BBS4-202ENST00000395205 AFG3L2Q9Y4W6 797 aa11.33□□□□□ -0.6
BBS4-202ENST00000395205 PCDHA1Q9Y5I3 950 aa11.33□□□□□ -0.6
BBS4-202ENST00000395205 PLA2G6O60733 806 aa11.33□□□□□ -0.6
BBS4-202ENST00000395205 GADD45BO75293 160 aaPredicted RBP11.33□□□□□ -0.6
BBS4-202ENST00000395205 HMGCS2P54868 508 aa11.33□□□□□ -0.6
BBS4-202ENST00000395205 STK38Q15208 465 aa11.33□□□□□ -0.6
BBS4-202ENST00000395205 SF3A1Q15459 793 aaKnown RBP11.33□□□□□ -0.6
BBS4-202ENST00000395205 ANO1Q5XXA6 986 aa11.33□□□□□ -0.6
BBS4-202ENST00000395205 FBXO11Q86XK2 927 aa11.33□□□□□ -0.6
BBS4-202ENST00000395205 AMNQ9BXJ7 453 aa11.33□□□□□ -0.6
BBS4-202ENST00000395205 FBXO28Q9NVF7 368 aa11.33□□□□□ -0.6
BBS4-202ENST00000395205 WDR90Q96KV7 1748 aa11.32□□□□□ -0.6
BBS4-202ENST00000395205 ADAMTS3O15072 1205 aa11.32□□□□□ -0.6
BBS4-202ENST00000395205 XRCC6P12956 609 aaKnown RBP eCLIP11.32□□□□□ -0.6
BBS4-202ENST00000395205 VCAM1P19320 739 aa11.32□□□□□ -0.6
BBS4-202ENST00000395205 ADCY7P51828 1080 aa11.32□□□□□ -0.6
BBS4-202ENST00000395205 FMR1Q06787 632 aaKnown RBP eCLIP11.32□□□□□ -0.6
BBS4-202ENST00000395205 RILPL1Q5EBL4 403 aa11.32□□□□□ -0.6
BBS4-202ENST00000395205 CCDC174Q6PII3 467 aa11.32□□□□□ -0.6
BBS4-202ENST00000395205 PIK3AP1Q6ZUJ8 805 aa11.32□□□□□ -0.6
BBS4-202ENST00000395205 DAGLBQ8NCG7 672 aa11.32□□□□□ -0.6
BBS4-202ENST00000395205 BICD2Q8TD16 824 aa11.32□□□□□ -0.6
BBS4-202ENST00000395205 RASGRP4Q8TDF6 673 aa11.32□□□□□ -0.6
BBS4-202ENST00000395205 CLMNQ96JQ2 1002 aa11.32□□□□□ -0.6
BBS4-202ENST00000395205 RPAP3Q9H6T3 665 aaPredicted RBP11.32□□□□□ -0.6
BBS4-202ENST00000395205 RCOR1Q9UKL0 485 aa11.32□□□□□ -0.6
BBS4-202ENST00000395205 NOL7Q9UMY1 257 aaKnown RBP11.32□□□□□ -0.6
BBS4-202ENST00000395205 PCDHA6Q9UN73 950 aa11.32□□□□□ -0.6
BBS4-202ENST00000395205 PCDHA8Q9Y5H6 950 aa11.32□□□□□ -0.6
BBS4-202ENST00000395205 CCDC194A0A1B0GVG4 234 aa11.32□□□□□ -0.6
BBS4-202ENST00000395205 RRP9O43818 475 aaKnown RBP11.32□□□□□ -0.6
BBS4-202ENST00000395205 USH1GQ495M9 461 aa11.32□□□□□ -0.6
BBS4-202ENST00000395205 EARS2Q5JPH6 523 aaKnown RBP11.32□□□□□ -0.6
BBS4-202ENST00000395205 PRPF38AQ8NAV1 312 aaKnown RBP11.32□□□□□ -0.6
BBS4-202ENST00000395205 RBM46Q8TBY0 533 aaKnown RBP11.32□□□□□ -0.6
BBS4-202ENST00000395205 SLF1Q9BQI6 1058 aa11.32□□□□□ -0.6
BBS4-202ENST00000395205 CTDP1Q9Y5B0 961 aaPredicted RBP11.32□□□□□ -0.6
BBS4-202ENST00000395205 FAM205CA6NFA0 338 aa11.31□□□□□ -0.6
BBS4-202ENST00000395205 FLOT1O75955 427 aa11.31□□□□□ -0.6
BBS4-202ENST00000395205 MRPL12P52815 198 aaKnown RBP11.31□□□□□ -0.6
BBS4-202ENST00000395205 UBE2HP62256 183 aa11.31□□□□□ -0.6
BBS4-202ENST00000395205 MAP3K11Q16584 847 aa11.31□□□□□ -0.6
BBS4-202ENST00000395205 NOM1Q5C9Z4 860 aaKnown RBP11.31□□□□□ -0.6
BBS4-202ENST00000395205 PPP1R18Q6NYC8 613 aa11.31□□□□□ -0.6
BBS4-202ENST00000395205 ERO1BQ86YB8 467 aa11.31□□□□□ -0.6
BBS4-202ENST00000395205 TNFRSF25Q93038 417 aa11.31□□□□□ -0.6
BBS4-202ENST00000395205 OTUD5Q96G74 571 aa11.31□□□□□ -0.6
BBS4-202ENST00000395205 PSTPIP2Q9H939 334 aa11.31□□□□□ -0.6
BBS4-202ENST00000395205 POLR3EQ9NVU0 708 aa11.31□□□□□ -0.6
BBS4-202ENST00000395205 BIN2Q9UBW5 565 aaPredicted RBP11.31□□□□□ -0.6
BBS4-202ENST00000395205 SCN4AP35499 1836 aa11.31□□□□□ -0.6
BBS4-202ENST00000395205 ESYT2A0FGR8 921 aa11.31□□□□□ -0.6
BBS4-202ENST00000395205 ME1P48163 572 aa11.31□□□□□ -0.6
BBS4-202ENST00000395205 TOB1P50616 345 aaPredicted RBP11.31□□□□□ -0.6
BBS4-202ENST00000395205 PPATQ06203 517 aa11.31□□□□□ -0.6
BBS4-202ENST00000395205 TRAF1Q13077 416 aa11.31□□□□□ -0.6
BBS4-202ENST00000395205 JAKMIP3Q5VZ66 844 aa11.31□□□□□ -0.6
BBS4-202ENST00000395205 LINC00301Q8NCQ3 95 aa11.31□□□□□ -0.6
BBS4-202ENST00000395205 CUL5Q93034 780 aa11.31□□□□□ -0.6
BBS4-202ENST00000395205 RANBP17Q9H2T7 1088 aaKnown RBP11.31□□□□□ -0.6
BBS4-202ENST00000395205 RIC8AQ9NPQ8 531 aa11.31□□□□□ -0.6
BBS4-202ENST00000395205 ELP1O95163 1332 aa11.31□□□□□ -0.6
BBS4-202ENST00000395205 SPTLC2O15270 562 aa11.3□□□□□ -0.6
BBS4-202ENST00000395205 YEATS4O95619 227 aa11.3□□□□□ -0.6
BBS4-202ENST00000395205 NASPP49321 788 aaPredicted RBP11.3□□□□□ -0.6
BBS4-202ENST00000395205 REXO1Q8N1G1 1221 aaKnown RBP11.3□□□□□ -0.6
BBS4-202ENST00000395205 GPT2Q8TD30 523 aa11.3□□□□□ -0.6
BBS4-202ENST00000395205 KCNG4Q8TDN1 519 aa11.3□□□□□ -0.6
BBS4-202ENST00000395205 SLC10A4Q96EP9 437 aa11.3□□□□□ -0.6
BBS4-202ENST00000395205 C12orf42Q96LP6 360 aa11.3□□□□□ -0.6
BBS4-202ENST00000395205 MYH4Q9Y623 1939 aa11.3□□□□□ -0.6
BBS4-202ENST00000395205 M0R2N6 131 aa11.3□□□□□ -0.6
BBS4-202ENST00000395205 MBD3O95983 291 aa11.3□□□□□ -0.6
BBS4-202ENST00000395205 SLC39A14Q15043 492 aa11.3□□□□□ -0.6
BBS4-202ENST00000395205 KRT25Q7Z3Z0 450 aa11.3□□□□□ -0.6
BBS4-202ENST00000395205 GLT8D2Q9H1C3 349 aa11.3□□□□□ -0.6
BBS4-202ENST00000395205 TMEM260Q9NX78 707 aa11.3□□□□□ -0.6
BBS4-202ENST00000395205 CEP131Q9UPN4 1083 aa11.3□□□□□ -0.6
BBS4-202ENST00000395205 PCDHB6Q9Y5E3 794 aa11.3□□□□□ -0.6
BBS4-202ENST00000395205 IRF6O14896 467 aa11.29□□□□□ -0.6
BBS4-202ENST00000395205 ZBED4O75132 1171 aa11.29□□□□□ -0.6
BBS4-202ENST00000395205 CELF2O95319 508 aaKnown RBP11.29□□□□□ -0.6
BBS4-202ENST00000395205 MARCKSP29966 332 aaPredicted RBP11.29□□□□□ -0.6
BBS4-202ENST00000395205 ZNF174Q15697 407 aa11.29□□□□□ -0.6
BBS4-202ENST00000395205 KLHL40Q2TBA0 621 aa11.29□□□□□ -0.6
BBS4-202ENST00000395205 SH3D19Q5HYK7 790 aa11.29□□□□□ -0.6
BBS4-202ENST00000395205 LDLRAD1Q5T700 205 aa11.29□□□□□ -0.6
BBS4-202ENST00000395205 C2orf69Q8N8R5 385 aa11.29□□□□□ -0.6
BBS4-202ENST00000395205 OPTNQ96CV9 577 aa11.29□□□□□ -0.6
BBS4-202ENST00000395205 GZF1Q9H116 711 aaPredicted RBP11.29□□□□□ -0.6
BBS4-202ENST00000395205 PPP1R9AQ9ULJ8 1098 aa11.29□□□□□ -0.6
BBS4-202ENST00000395205 SPDYE5A6NIY4 337 aa11.29□□□□□ -0.6
BBS4-202ENST00000395205 TAL1P17542 331 aaPredicted RBP11.29□□□□□ -0.6
BBS4-202ENST00000395205 NONOQ15233 471 aaKnown RBP eCLIP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms