RNA–Protein interactions for RNA: ENST00000395090.5

RTN1-203, Transcript of reticulon 1, humanhuman

TSL 2 BASIC

Gene RTN1, Length 1,609 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-203ENST00000395090 ADAMTSL1Q8N6G6 1762 aa13.36□□□□□ -0.27
RTN1-203ENST00000395090 ZIC2O95409 532 aaPredicted RBP13.36□□□□□ -0.27
RTN1-203ENST00000395090 LARGE1O95461 756 aa13.36□□□□□ -0.27
RTN1-203ENST00000395090 GNRH1P01148 92 aa13.36□□□□□ -0.27
RTN1-203ENST00000395090 HSP90AA1P07900 732 aaKnown RBP13.36□□□□□ -0.27
RTN1-203ENST00000395090 PICALMQ13492 652 aa13.36□□□□□ -0.27
RTN1-203ENST00000395090 RRP12Q5JTH9 1297 aaKnown RBP13.36□□□□□ -0.27
RTN1-203ENST00000395090 SGMS1Q86VZ5 419 aa13.36□□□□□ -0.27
RTN1-203ENST00000395090 ZFPM1Q8IX07 1006 aa13.36□□□□□ -0.27
RTN1-203ENST00000395090 DYNLL2Q96FJ2 89 aa13.36□□□□□ -0.27
RTN1-203ENST00000395090 DHX36Q9H2U1 1008 aaKnown RBP13.36□□□□□ -0.27
RTN1-203ENST00000395090 ZNF287Q9HBT7 754 aa13.36□□□□□ -0.27
RTN1-203ENST00000395090 DDX60LQ5H9U9 1706 aaKnown RBP13.36□□□□□ -0.27
RTN1-203ENST00000395090 SBF1O95248 1867 aa13.36□□□□□ -0.27
RTN1-203ENST00000395090 DICER1Q9UPY3 1922 aaKnown RBP13.36□□□□□ -0.27
RTN1-203ENST00000395090 TMEM229AB2RXF0 380 aa13.35□□□□□ -0.27
RTN1-203ENST00000395090 SH2B2O14492 632 aaPredicted RBP13.35□□□□□ -0.27
RTN1-203ENST00000395090 PFKFB2O60825 505 aa13.35□□□□□ -0.27
RTN1-203ENST00000395090 PDIA3P30101 505 aaKnown RBP13.35□□□□□ -0.27
RTN1-203ENST00000395090 GMPSP49915 693 aaPredicted RBP13.35□□□□□ -0.27
RTN1-203ENST00000395090 GDF10P55107 478 aa13.35□□□□□ -0.27
RTN1-203ENST00000395090 WDR4P57081 412 aaKnown RBP13.35□□□□□ -0.27
RTN1-203ENST00000395090 GPC2Q8N158 579 aa13.35□□□□□ -0.27
RTN1-203ENST00000395090 STK11IPQ8N1F8 1099 aa13.35□□□□□ -0.27
RTN1-203ENST00000395090 TMTC2Q8N394 836 aa13.35□□□□□ -0.27
RTN1-203ENST00000395090 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.35□□□□□ -0.27
RTN1-203ENST00000395090 MYOZ2Q9NPC6 264 aa13.35□□□□□ -0.27
RTN1-203ENST00000395090 TOMM22Q9NS69 142 aa13.35□□□□□ -0.27
RTN1-203ENST00000395090 ZNF70Q9UC06 446 aaPredicted RBP13.35□□□□□ -0.27
RTN1-203ENST00000395090 CNOT7Q9UIV1 285 aaKnown RBP13.35□□□□□ -0.27
RTN1-203ENST00000395090 SRCAPQ6ZRS2 3230 aa13.35□□□□□ -0.27
RTN1-203ENST00000395090 ZNF541Q9H0D2 1346 aa13.35□□□□□ -0.27
RTN1-203ENST00000395090 ECM29Q5VYK3 1845 aa13.35□□□□□ -0.27
RTN1-203ENST00000395090 M0R2N6 131 aa13.35□□□□□ -0.27
RTN1-203ENST00000395090 WNT10BO00744 389 aa13.35□□□□□ -0.27
RTN1-203ENST00000395090 RANBP6O60518 1105 aaKnown RBP13.35□□□□□ -0.27
RTN1-203ENST00000395090 PRDM1O75626 825 aa13.35□□□□□ -0.27
RTN1-203ENST00000395090 CDK8P49336 464 aa13.35□□□□□ -0.27
RTN1-203ENST00000395090 CACNB3P54284 484 aa13.35□□□□□ -0.27
RTN1-203ENST00000395090 APOBRQ0VD83 1088 aa13.35□□□□□ -0.27
RTN1-203ENST00000395090 ST3GAL1Q11201 340 aa13.35□□□□□ -0.27
RTN1-203ENST00000395090 SEC23AQ15436 765 aa13.35□□□□□ -0.27
RTN1-203ENST00000395090 METTL16Q86W50 562 aaKnown RBP13.35□□□□□ -0.27
RTN1-203ENST00000395090 ZSCAN10Q96SZ4 725 aaPredicted RBP13.35□□□□□ -0.27
RTN1-203ENST00000395090 EHD4Q9H223 541 aa13.35□□□□□ -0.27
RTN1-203ENST00000395090 LY9Q9HBG7 655 aa13.35□□□□□ -0.27
RTN1-203ENST00000395090 ZNF358Q9NW07 568 aa13.35□□□□□ -0.27
RTN1-203ENST00000395090 BRPF3Q9ULD4 1205 aa13.35□□□□□ -0.27
RTN1-203ENST00000395090 NAV1Q8NEY1 1877 aa13.34□□□□□ -0.27
RTN1-203ENST00000395090 ATRNL1Q5VV63 1379 aa13.34□□□□□ -0.27
RTN1-203ENST00000395090 COL2A1P02458 1487 aaPredicted RBP13.34□□□□□ -0.27
RTN1-203ENST00000395090 LAMB1P07942 1786 aa13.34□□□□□ -0.27
RTN1-203ENST00000395090 IFIT3O14879 490 aaKnown RBP13.34□□□□□ -0.27
RTN1-203ENST00000395090 STAU1O95793 577 aaKnown RBP13.34□□□□□ -0.27
RTN1-203ENST00000395090 SART3Q15020 963 aaKnown RBP13.34□□□□□ -0.27
RTN1-203ENST00000395090 TMEM67Q5HYA8 995 aa13.34□□□□□ -0.27
RTN1-203ENST00000395090 IQCA1Q86XH1 822 aa13.34□□□□□ -0.27
RTN1-203ENST00000395090 FOXP4Q8IVH2 680 aaPredicted RBP13.34□□□□□ -0.27
RTN1-203ENST00000395090 SLKQ9H2G2 1235 aaPredicted RBP13.34□□□□□ -0.27
RTN1-203ENST00000395090 MKNK2Q9HBH9 465 aa13.34□□□□□ -0.27
RTN1-203ENST00000395090 TCP11L1Q9NUJ3 509 aa13.34□□□□□ -0.27
RTN1-203ENST00000395090 PI4KBQ9UBF8 816 aa13.34□□□□□ -0.27
RTN1-203ENST00000395090 SERPINB13Q9UIV8 391 aa13.34□□□□□ -0.27
RTN1-203ENST00000395090 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.34□□□□□ -0.27
RTN1-203ENST00000395090 GJA3Q9Y6H8 435 aa13.34□□□□□ -0.27
RTN1-203ENST00000395090 MYH1P12882 1939 aa13.34□□□□□ -0.27
RTN1-203ENST00000395090 SHTN1A0MZ66 631 aa13.33□□□□□ -0.28
RTN1-203ENST00000395090 GRIN3BO60391 1043 aa13.33□□□□□ -0.28
RTN1-203ENST00000395090 ADH1AP07327 375 aa13.33□□□□□ -0.28
RTN1-203ENST00000395090 TIMP2P16035 220 aa13.33□□□□□ -0.28
RTN1-203ENST00000395090 TCP10Q12799 353 aa13.33□□□□□ -0.28
RTN1-203ENST00000395090 CBLBQ13191 982 aa13.33□□□□□ -0.28
RTN1-203ENST00000395090 SLC4A8Q2Y0W8 1093 aa13.33□□□□□ -0.28
RTN1-203ENST00000395090 FAM83AQ86UY5 434 aa13.33□□□□□ -0.28
RTN1-203ENST00000395090 ZNF444Q8N0Y2 327 aaPredicted RBP13.33□□□□□ -0.28
RTN1-203ENST00000395090 NECAB1Q8N987 351 aa13.33□□□□□ -0.28
RTN1-203ENST00000395090 ANKS1AQ92625 1134 aa13.33□□□□□ -0.28
RTN1-203ENST00000395090 GTF3C6Q969F1 213 aa13.33□□□□□ -0.28
RTN1-203ENST00000395090 CHMP4CQ96CF2 233 aa13.33□□□□□ -0.28
RTN1-203ENST00000395090 HINFPQ9BQA5 517 aa13.33□□□□□ -0.28
RTN1-203ENST00000395090 UBAC1Q9BSL1 405 aa13.33□□□□□ -0.28
RTN1-203ENST00000395090 ETNK1Q9HBU6 452 aa13.33□□□□□ -0.28
RTN1-203ENST00000395090 SENP2Q9HC62 589 aa13.33□□□□□ -0.28
RTN1-203ENST00000395090 TMOD2Q9NZR1 351 aa13.33□□□□□ -0.28
RTN1-203ENST00000395090 SWAP70Q9UH65 585 aa13.33□□□□□ -0.28
RTN1-203ENST00000395090 DDTLA6NHG4 134 aaPredicted RBP13.32□□□□□ -0.28
RTN1-203ENST00000395090 MYO1BO43795 1136 aa13.32□□□□□ -0.28
RTN1-203ENST00000395090 INHAP05111 366 aa13.32□□□□□ -0.28
RTN1-203ENST00000395090 HLA-DOAP06340 250 aa13.32□□□□□ -0.28
RTN1-203ENST00000395090 TFAP4Q01664 338 aa13.32□□□□□ -0.28
RTN1-203ENST00000395090 KCNA1Q09470 495 aa13.32□□□□□ -0.28
RTN1-203ENST00000395090 SCRN1Q12765 414 aa13.32□□□□□ -0.28
RTN1-203ENST00000395090 NBPF9Q3BBW0 867 aa13.32□□□□□ -0.28
RTN1-203ENST00000395090 Q6ZVU0 165 aa13.32□□□□□ -0.28
RTN1-203ENST00000395090 ENAHQ8N8S7 591 aaPredicted RBP13.32□□□□□ -0.28
RTN1-203ENST00000395090 TSEN2Q8NCE0 465 aaKnown RBP13.32□□□□□ -0.28
RTN1-203ENST00000395090 SLC44A5Q8NCS7 719 aa13.32□□□□□ -0.28
RTN1-203ENST00000395090 FAM151AQ8WW52 585 aa13.32□□□□□ -0.28
RTN1-203ENST00000395090 ZKSCAN3Q9BRR0 538 aa13.32□□□□□ -0.28
RTN1-203ENST00000395090 ZFAND3Q9H8U3 227 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms