RNA–Protein interactions for RNA: ENST00000395065.7

NXF3-201, Transcript of nuclear RNA export factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF3, Length 1,938 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3-201ENST00000395065 CAGE1Q8TC20 777 aa7.04□□□□□ -1.28
NXF3-201ENST00000395065 PIK3R5Q8WYR1 880 aa7.04□□□□□ -1.28
NXF3-201ENST00000395065 SGSM3Q96HU1 749 aa7.04□□□□□ -1.28
NXF3-201ENST00000395065 RUFY1Q96T51 708 aa7.04□□□□□ -1.28
NXF3-201ENST00000395065 TSGA10Q9BZW7 698 aa7.04□□□□□ -1.28
NXF3-201ENST00000395065 GDF3Q9NR23 364 aa7.04□□□□□ -1.28
NXF3-201ENST00000395065 KCNJ14Q9UNX9 436 aa7.04□□□□□ -1.28
NXF3-201ENST00000395065 CCDC9Q9Y3X0 531 aaKnown RBP7.04□□□□□ -1.28
NXF3-201ENST00000395065 DISP2A7MBM2 1401 aa7.04□□□□□ -1.28
NXF3-201ENST00000395065 UBR2Q8IWV8 1755 aa7.04□□□□□ -1.28
NXF3-201ENST00000395065 XDHP47989 1333 aa7.04□□□□□ -1.28
NXF3-201ENST00000395065 PDS5AQ29RF7 1337 aaKnown RBP7.04□□□□□ -1.28
NXF3-201ENST00000395065 RASSF10A6NK89 507 aa7.03□□□□□ -1.28
NXF3-201ENST00000395065 B4E1Z4 1266 aa7.03□□□□□ -1.28
NXF3-201ENST00000395065 BMP15O95972 392 aa7.03□□□□□ -1.28
NXF3-201ENST00000395065 KRT14P02533 472 aa7.03□□□□□ -1.28
NXF3-201ENST00000395065 A1BGP04217 495 aa7.03□□□□□ -1.28
NXF3-201ENST00000395065 PARP1P09874 1014 aaKnown RBP7.03□□□□□ -1.28
NXF3-201ENST00000395065 NR1D1P20393 614 aa7.03□□□□□ -1.28
NXF3-201ENST00000395065 EEF1GP26641 437 aaKnown RBP7.03□□□□□ -1.28
NXF3-201ENST00000395065 RCAN1P53805 252 aa7.03□□□□□ -1.28
NXF3-201ENST00000395065 CTDSPL2Q05D32 466 aa7.03□□□□□ -1.28
NXF3-201ENST00000395065 ITGB3BPQ13352 177 aaPredicted RBP7.03□□□□□ -1.28
NXF3-201ENST00000395065 XRCC4Q13426 336 aa7.03□□□□□ -1.28
NXF3-201ENST00000395065 ALX1Q15699 326 aa7.03□□□□□ -1.28
NXF3-201ENST00000395065 SNCBQ16143 134 aa7.03□□□□□ -1.28
NXF3-201ENST00000395065 TSR1Q2NL82 804 aaKnown RBP7.03□□□□□ -1.28
NXF3-201ENST00000395065 ZNF658Q5TYW1 1059 aaPredicted RBP7.03□□□□□ -1.28
NXF3-201ENST00000395065 LRCH2Q5VUJ6 765 aa7.03□□□□□ -1.28
NXF3-201ENST00000395065 CYB5D1Q6P9G0 228 aa7.03□□□□□ -1.28
NXF3-201ENST00000395065 KIAA1328Q86T90 577 aa7.03□□□□□ -1.28
NXF3-201ENST00000395065 EGFL6Q8IUX8 553 aa7.03□□□□□ -1.28
NXF3-201ENST00000395065 PARP9Q8IXQ6 854 aa7.03□□□□□ -1.28
NXF3-201ENST00000395065 CRACR2BQ8N4Y2 399 aaPredicted RBP7.03□□□□□ -1.28
NXF3-201ENST00000395065 SH2D3CQ8N5H7 860 aa7.03□□□□□ -1.28
NXF3-201ENST00000395065 PLBD2Q8NHP8 589 aa7.03□□□□□ -1.28
NXF3-201ENST00000395065 SYMPKQ92797 1274 aaKnown RBP7.03□□□□□ -1.28
NXF3-201ENST00000395065 MTRQ99707 1265 aa7.03□□□□□ -1.28
NXF3-201ENST00000395065 MTA3Q9BTC8 594 aa7.03□□□□□ -1.28
NXF3-201ENST00000395065 NUP58Q9BVL2 599 aa7.03□□□□□ -1.28
NXF3-201ENST00000395065 OSBPL7Q9BZF2 842 aa7.03□□□□□ -1.28
NXF3-201ENST00000395065 RNF39Q9H2S5 420 aa7.03□□□□□ -1.28
NXF3-201ENST00000395065 NHEJ1Q9H9Q4 299 aaPredicted RBP7.03□□□□□ -1.28
NXF3-201ENST00000395065 ATP6V0A4Q9HBG4 840 aa7.03□□□□□ -1.28
NXF3-201ENST00000395065 JADE2Q9NQC1 790 aa7.03□□□□□ -1.28
NXF3-201ENST00000395065 SLAIN2Q9P270 581 aa7.03□□□□□ -1.28
NXF3-201ENST00000395065 KCNG1Q9UIX4 513 aa7.03□□□□□ -1.28
NXF3-201ENST00000395065 DUSP10Q9Y6W6 482 aa7.03□□□□□ -1.28
NXF3-201ENST00000395065 MYH13Q9UKX3 1938 aa7.03□□□□□ -1.28
NXF3-201ENST00000395065 MYH10P35580 1976 aa7.03□□□□□ -1.28
NXF3-201ENST00000395065 ROBO1Q9Y6N7 1651 aa7.03□□□□□ -1.28
NXF3-201ENST00000395065 AKAP11Q9UKA4 1901 aa7.03□□□□□ -1.28
NXF3-201ENST00000395065 C5orf60A6NFR6 353 aa7.03□□□□□ -1.28
NXF3-201ENST00000395065 TRIM75PA6NK02 468 aa7.03□□□□□ -1.28
NXF3-201ENST00000395065 HMGB1P1B2RPK0 211 aaPredicted RBP7.03□□□□□ -1.28
NXF3-201ENST00000395065 ATP5J2-PTCD1G3V325 749 aa7.03□□□□□ -1.28
NXF3-201ENST00000395065 ZNF263O14978 683 aa7.03□□□□□ -1.28
NXF3-201ENST00000395065 GTPBP6O43824 516 aaPredicted RBP7.03□□□□□ -1.28
NXF3-201ENST00000395065 MGRN1O60291 552 aa7.03□□□□□ -1.28
NXF3-201ENST00000395065 PTCD1O75127 700 aaKnown RBP7.03□□□□□ -1.28
NXF3-201ENST00000395065 LCA5LO95447 670 aa7.03□□□□□ -1.28
NXF3-201ENST00000395065 SNRPA1P09661 255 aaKnown RBP7.03□□□□□ -1.28
NXF3-201ENST00000395065 SRGNP10124 158 aa7.03□□□□□ -1.28
NXF3-201ENST00000395065 HNRNPH3P31942 346 aaKnown RBP7.03□□□□□ -1.28
NXF3-201ENST00000395065 SLC8A1P32418 973 aa7.03□□□□□ -1.28
NXF3-201ENST00000395065 ADD2P35612 726 aa7.03□□□□□ -1.28
NXF3-201ENST00000395065 DNM2P50570 870 aa7.03□□□□□ -1.28
NXF3-201ENST00000395065 ATP1A2P50993 1020 aa7.03□□□□□ -1.28
NXF3-201ENST00000395065 SLC8A3P57103 927 aa7.03□□□□□ -1.28
NXF3-201ENST00000395065 IRX1P78414 480 aaPredicted RBP7.03□□□□□ -1.28
NXF3-201ENST00000395065 ZBED6P86452 979 aa7.03□□□□□ -1.28
NXF3-201ENST00000395065 HDLBPQ00341 1268 aaKnown RBP7.03□□□□□ -1.28
NXF3-201ENST00000395065 GUCY1A3Q02108 690 aa7.03□□□□□ -1.28
NXF3-201ENST00000395065 IFFO1Q0D2I5 559 aa7.03□□□□□ -1.28
NXF3-201ENST00000395065 KIF5AQ12840 1032 aa7.03□□□□□ -1.28
NXF3-201ENST00000395065 GRIK3Q13003 919 aa7.03□□□□□ -1.28
NXF3-201ENST00000395065 IFT88Q13099 833 aa7.03□□□□□ -1.28
NXF3-201ENST00000395065 SEMA3FQ13275 785 aa7.03□□□□□ -1.28
NXF3-201ENST00000395065 SCARF1Q14162 830 aa7.03□□□□□ -1.28
NXF3-201ENST00000395065 FIGNQ5HY92 759 aa7.03□□□□□ -1.28
NXF3-201ENST00000395065 TMEM67Q5HYA8 995 aa7.03□□□□□ -1.28
NXF3-201ENST00000395065 RRAGBQ5VZM2 374 aa7.03□□□□□ -1.28
NXF3-201ENST00000395065 PDXDC2PQ6P474 469 aa7.03□□□□□ -1.28
NXF3-201ENST00000395065 CCDC155Q8N6L0 562 aa7.03□□□□□ -1.28
NXF3-201ENST00000395065 OXER1Q8TDS5 423 aa7.03□□□□□ -1.28
NXF3-201ENST00000395065 NELFBQ8WX92 580 aa7.03□□□□□ -1.28
NXF3-201ENST00000395065 P3H4Q92791 437 aa7.03□□□□□ -1.28
NXF3-201ENST00000395065 DCAF5Q96JK2 942 aa7.03□□□□□ -1.28
NXF3-201ENST00000395065 ATP6V1G3Q96LB4 118 aa7.03□□□□□ -1.28
NXF3-201ENST00000395065 OSBPL9Q96SU4 736 aa7.03□□□□□ -1.28
NXF3-201ENST00000395065 PYM1Q9BRP8 204 aaKnown RBP7.03□□□□□ -1.28
NXF3-201ENST00000395065 CABP5Q9NP86 173 aa7.03□□□□□ -1.28
NXF3-201ENST00000395065 ZSWIM5Q9P217 1185 aa7.03□□□□□ -1.28
NXF3-201ENST00000395065 BCCIPQ9P287 314 aaKnown RBP eCLIP7.03□□□□□ -1.28
NXF3-201ENST00000395065 SLC12A7Q9Y666 1083 aa7.03□□□□□ -1.28
NXF3-201ENST00000395065 SHANK3Q9BYB0 1731 aa7.03□□□□□ -1.28
NXF3-201ENST00000395065 SOS2Q07890 1332 aaPredicted RBP7.02□□□□□ -1.29
NXF3-201ENST00000395065 DCCP43146 1447 aa7.02□□□□□ -1.29
NXF3-201ENST00000395065 PAPPAQ13219 1627 aa7.02□□□□□ -1.29
NXF3-201ENST00000395065 A0A1B0GUA9 196 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms