RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 ABHD16BQ9H3Z7 469 aa19■□□□□ 0.63
SNCA-205ENST00000394991 F5H6K3 240 aa18.99■□□□□ 0.63
SNCA-205ENST00000394991 CD4P01730 458 aa18.99■□□□□ 0.63
SNCA-205ENST00000394991 ATP5JP18859 108 aa18.99■□□□□ 0.63
SNCA-205ENST00000394991 KLRC3Q07444 240 aa18.99■□□□□ 0.63
SNCA-205ENST00000394991 CCDC85BQ15834 202 aaPredicted RBP18.99■□□□□ 0.63
SNCA-205ENST00000394991 GNASQ5JWF2 1037 aa18.99■□□□□ 0.63
SNCA-205ENST00000394991 ARMCX2Q7L311 632 aa18.99■□□□□ 0.63
SNCA-205ENST00000394991 SIRT2Q8IXJ6 389 aa18.99■□□□□ 0.63
SNCA-205ENST00000394991 HERVK_113Q902F9 699 aa18.99■□□□□ 0.63
SNCA-205ENST00000394991 VTI1AQ96AJ9 217 aa18.99■□□□□ 0.63
SNCA-205ENST00000394991 DDRGK1Q96HY6 314 aa18.99■□□□□ 0.63
SNCA-205ENST00000394991 HAUS7Q99871 368 aa18.99■□□□□ 0.63
SNCA-205ENST00000394991 NKX2-4Q9H2Z4 354 aa18.99■□□□□ 0.63
SNCA-205ENST00000394991 RAVER2Q9HCJ3 691 aaKnown RBP18.99■□□□□ 0.63
SNCA-205ENST00000394991 IL23AQ9NPF7 189 aa18.99■□□□□ 0.63
SNCA-205ENST00000394991 NYAP2Q9P242 653 aa18.99■□□□□ 0.63
SNCA-205ENST00000394991 YBX2Q9Y2T7 364 aaKnown RBP18.99■□□□□ 0.63
SNCA-205ENST00000394991 UMODL1Q5DID0 1318 aa18.99■□□□□ 0.63
SNCA-205ENST00000394991 REV3LO60673 3130 aa18.98■□□□□ 0.63
SNCA-205ENST00000394991 BEX3Q00994 111 aa18.98■□□□□ 0.63
SNCA-205ENST00000394991 RAB30Q15771 203 aa18.98■□□□□ 0.63
SNCA-205ENST00000394991 STK11IPQ8N1F8 1099 aa18.98■□□□□ 0.63
SNCA-205ENST00000394991 PRPF38AQ8NAV1 312 aaKnown RBP18.98■□□□□ 0.63
SNCA-205ENST00000394991 SPC25Q9HBM1 224 aa18.98■□□□□ 0.63
SNCA-205ENST00000394991 ARPP21Q9UBL0 812 aaPredicted RBP18.98■□□□□ 0.63
SNCA-205ENST00000394991 ASTN1O14525 1302 aa18.98■□□□□ 0.63
SNCA-205ENST00000394991 TLR3O15455 904 aaKnown RBP18.97■□□□□ 0.63
SNCA-205ENST00000394991 IGFBP4P22692 258 aa18.97■□□□□ 0.63
SNCA-205ENST00000394991 NKX3-2P78367 333 aa18.97■□□□□ 0.63
SNCA-205ENST00000394991 MRPS5P82675 430 aaKnown RBP18.97■□□□□ 0.63
SNCA-205ENST00000394991 UHRF1Q96T88 793 aaPredicted RBP18.97■□□□□ 0.63
SNCA-205ENST00000394991 SLC38A10Q9HBR0 1119 aa18.97■□□□□ 0.63
SNCA-205ENST00000394991 MSRAQ9UJ68 235 aa18.97■□□□□ 0.63
SNCA-205ENST00000394991 SCN5AQ14524 2016 aa18.96■□□□□ 0.63
SNCA-205ENST00000394991 PRRC2BQ5JSZ5 2229 aaKnown RBP18.96■□□□□ 0.63
SNCA-205ENST00000394991 IGKV6D-41A0A0C4DH26 115 aa18.96■□□□□ 0.63
SNCA-205ENST00000394991 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.96■□□□□ 0.63
SNCA-205ENST00000394991 ZBED4O75132 1171 aa18.96■□□□□ 0.63
SNCA-205ENST00000394991 SBK1Q52WX2 424 aa18.96■□□□□ 0.63
SNCA-205ENST00000394991 CCDC144CPQ8IYA2 1237 aa18.96■□□□□ 0.63
SNCA-205ENST00000394991 ANKRD35Q8N283 1001 aa18.96■□□□□ 0.63
SNCA-205ENST00000394991 SLC43A3Q8NBI5 491 aa18.96■□□□□ 0.63
SNCA-205ENST00000394991 KIFC2Q96AC6 838 aa18.96■□□□□ 0.63
SNCA-205ENST00000394991 PTGS1P23219 599 aa18.95■□□□□ 0.62
SNCA-205ENST00000394991 CNTN2Q02246 1040 aa18.95■□□□□ 0.62
SNCA-205ENST00000394991 CXCL17Q6UXB2 119 aa18.95■□□□□ 0.62
SNCA-205ENST00000394991 CHST13Q8NET6 341 aa18.95■□□□□ 0.62
SNCA-205ENST00000394991 STRBPQ96SI9 672 aaKnown RBP18.95■□□□□ 0.62
SNCA-205ENST00000394991 CLIP2Q9UDT6 1046 aa18.95■□□□□ 0.62
SNCA-205ENST00000394991 GSG1L2A8MUP6 293 aa18.94■□□□□ 0.62
SNCA-205ENST00000394991 RAB11FIP3O75154 756 aa18.94■□□□□ 0.62
SNCA-205ENST00000394991 FGBP02675 491 aa18.94■□□□□ 0.62
SNCA-205ENST00000394991 OTOP2Q7RTS6 562 aa18.94■□□□□ 0.62
SNCA-205ENST00000394991 RPAP2Q8IXW5 612 aaPredicted RBP18.94■□□□□ 0.62
SNCA-205ENST00000394991 NECAB3Q96P71 396 aaPredicted RBP18.94■□□□□ 0.62
SNCA-205ENST00000394991 HIPK3Q9H422 1215 aa18.94■□□□□ 0.62
SNCA-205ENST00000394991 SLC28A3Q9HAS3 691 aa18.94■□□□□ 0.62
SNCA-205ENST00000394991 MKNK2Q9HBH9 465 aa18.94■□□□□ 0.62
SNCA-205ENST00000394991 FBXO40Q9UH90 709 aa18.94■□□□□ 0.62
SNCA-205ENST00000394991 GRIN2DO15399 1336 aa18.94■□□□□ 0.62
SNCA-205ENST00000394991 TRANK1O15050 2925 aa18.94■□□□□ 0.62
SNCA-205ENST00000394991 HMMRO75330 724 aa18.93■□□□□ 0.62
SNCA-205ENST00000394991 RABGGTBP53611 331 aa18.93■□□□□ 0.62
SNCA-205ENST00000394991 CCL23P55773 120 aa18.93■□□□□ 0.62
SNCA-205ENST00000394991 LRRC47Q8N1G4 583 aaKnown RBP18.93■□□□□ 0.62
SNCA-205ENST00000394991 FAM133AQ8N9E0 248 aa18.93■□□□□ 0.62
SNCA-205ENST00000394991 VWCEQ96DN2 955 aa18.93■□□□□ 0.62
SNCA-205ENST00000394991 NOC4LQ9BVI4 516 aaKnown RBP18.93■□□□□ 0.62
SNCA-205ENST00000394991 WNT8AQ9H1J5 351 aa18.93■□□□□ 0.62
SNCA-205ENST00000394991 HOMER2Q9NSB8 354 aa18.93■□□□□ 0.62
SNCA-205ENST00000394991 FEM1BQ9UK73 627 aa18.93■□□□□ 0.62
SNCA-205ENST00000394991 GNEQ9Y223 722 aaKnown RBP18.93■□□□□ 0.62
SNCA-205ENST00000394991 CTDP1Q9Y5B0 961 aaPredicted RBP18.93■□□□□ 0.62
SNCA-205ENST00000394991 DDX49Q9Y6V7 483 aaKnown RBP18.93■□□□□ 0.62
SNCA-205ENST00000394991 SOWAHBA6NEL2 793 aa18.92■□□□□ 0.62
SNCA-205ENST00000394991 MINDY4BA8MYZ0 360 aa18.92■□□□□ 0.62
SNCA-205ENST00000394991 MYOGP15173 224 aa18.92■□□□□ 0.62
SNCA-205ENST00000394991 OAZ1P54368 228 aa18.92■□□□□ 0.62
SNCA-205ENST00000394991 TNFAIP2Q03169 654 aa18.92■□□□□ 0.62
SNCA-205ENST00000394991 ZSCAN25Q6NSZ9 544 aa18.92■□□□□ 0.62
SNCA-205ENST00000394991 MKL1Q969V6 931 aa18.92■□□□□ 0.62
SNCA-205ENST00000394991 CEP95Q96GE4 821 aa18.92■□□□□ 0.62
SNCA-205ENST00000394991 MTIF3Q9H2K0 278 aaKnown RBP18.92■□□□□ 0.62
SNCA-205ENST00000394991 EPB41L4AQ9HCS5 686 aaPredicted RBP18.92■□□□□ 0.62
SNCA-205ENST00000394991 PRDM1O75626 825 aa18.91■□□□□ 0.62
SNCA-205ENST00000394991 PLA2G5P39877 138 aa18.91■□□□□ 0.62
SNCA-205ENST00000394991 ITGA7Q13683 1181 aa18.91■□□□□ 0.62
SNCA-205ENST00000394991 TLK2Q86UE8 772 aa18.91■□□□□ 0.62
SNCA-205ENST00000394991 TRPV6Q9H1D0 765 aa18.91■□□□□ 0.62
SNCA-205ENST00000394991 A1CFQ9NQ94 594 aaKnown RBP18.91■□□□□ 0.62
SNCA-205ENST00000394991 ZBTB40Q9NUA8 1239 aa18.91■□□□□ 0.62
SNCA-205ENST00000394991 MTMR4Q9NYA4 1195 aa18.91■□□□□ 0.62
SNCA-205ENST00000394991 TANC1Q9C0D5 1861 aa18.9■□□□□ 0.62
SNCA-205ENST00000394991 B4GALT4O60513 344 aa18.9■□□□□ 0.62
SNCA-205ENST00000394991 CABYRO75952 493 aa18.9■□□□□ 0.62
SNCA-205ENST00000394991 FSCN1Q16658 493 aaKnown RBP18.9■□□□□ 0.62
SNCA-205ENST00000394991 TMEM63BQ5T3F8 832 aa18.9■□□□□ 0.62
SNCA-205ENST00000394991 GIMAP6Q6P9H5 292 aa18.9■□□□□ 0.62
SNCA-205ENST00000394991 NOL8Q76FK4 1167 aaKnown RBP18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms