RNA–Protein interactions for RNA: ENST00000394921.8

PMS2P3-201, Transcript of PMS1 homolog 2, mismatch repair system component pseudogene 3, humanhuman

TSL 2

Gene PMS2P3, Length 1,316 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P3-201ENST00000394921 SNAP25P60880 206 aa27.1■■□□□ 1.93
PMS2P3-201ENST00000394921 TTBK2Q6IQ55 1244 aa27.1■■□□□ 1.93
PMS2P3-201ENST00000394921 MAMDC4Q6UXC1 1216 aa27.1■■□□□ 1.93
PMS2P3-201ENST00000394921 ARRDC4Q8NCT1 418 aa27.1■■□□□ 1.93
PMS2P3-201ENST00000394921 DSCC1Q9BVC3 393 aa27.1■■□□□ 1.93
PMS2P3-201ENST00000394921 HOMER2Q9NSB8 354 aa27.1■■□□□ 1.93
PMS2P3-201ENST00000394921 SNAI1O95863 264 aaPredicted RBP27.09■■□□□ 1.93
PMS2P3-201ENST00000394921 CCDC96Q2M329 555 aa27.09■■□□□ 1.93
PMS2P3-201ENST00000394921 BTNL9Q6UXG8 535 aa27.09■■□□□ 1.93
PMS2P3-201ENST00000394921 ZNF467Q7Z7K2 595 aaPredicted RBP27.09■■□□□ 1.93
PMS2P3-201ENST00000394921 ANKRD35Q8N283 1001 aa27.09■■□□□ 1.93
PMS2P3-201ENST00000394921 RNF146Q9NTX7 359 aa27.09■■□□□ 1.93
PMS2P3-201ENST00000394921 SYNGAP1Q96PV0 1343 aa27.08■■□□□ 1.93
PMS2P3-201ENST00000394921 SYN1P17600 705 aa27.08■■□□□ 1.93
PMS2P3-201ENST00000394921 LRRC41Q15345 812 aa27.08■■□□□ 1.93
PMS2P3-201ENST00000394921 CCDC174Q6PII3 467 aa27.08■■□□□ 1.93
PMS2P3-201ENST00000394921 TTC14Q96N46 770 aa27.08■■□□□ 1.93
PMS2P3-201ENST00000394921 GDF15Q99988 308 aa27.08■■□□□ 1.93
PMS2P3-201ENST00000394921 ACAD9Q9H845 621 aa27.08■■□□□ 1.93
PMS2P3-201ENST00000394921 TKFCQ3LXA3 575 aa27.07■■□□□ 1.92
PMS2P3-201ENST00000394921 ESR2Q92731 530 aa27.07■■□□□ 1.92
PMS2P3-201ENST00000394921 CNPY2Q9Y2B0 182 aa27.07■■□□□ 1.92
PMS2P3-201ENST00000394921 PDHBP11177 359 aa27.06■■□□□ 1.92
PMS2P3-201ENST00000394921 SLC16A2P36021 539 aa27.06■■□□□ 1.92
PMS2P3-201ENST00000394921 RANBP17Q9H2T7 1088 aaKnown RBP27.06■■□□□ 1.92
PMS2P3-201ENST00000394921 A1CFQ9NQ94 594 aaKnown RBP27.06■■□□□ 1.92
PMS2P3-201ENST00000394921 PCDH10Q9P2E7 1040 aa27.06■■□□□ 1.92
PMS2P3-201ENST00000394921 FRMPD2Q68DX3 1309 aaPredicted RBP27.06■■□□□ 1.92
PMS2P3-201ENST00000394921 KBTBD13C9JR72 458 aa27.05■■□□□ 1.92
PMS2P3-201ENST00000394921 RARBP10826 455 aa27.05■■□□□ 1.92
PMS2P3-201ENST00000394921 ALAS1P13196 640 aa27.05■■□□□ 1.92
PMS2P3-201ENST00000394921 AKR1A1P14550 325 aa27.05■■□□□ 1.92
PMS2P3-201ENST00000394921 ATN1P54259 1190 aaPredicted RBP27.05■■□□□ 1.92
PMS2P3-201ENST00000394921 CNTN2Q02246 1040 aa27.05■■□□□ 1.92
PMS2P3-201ENST00000394921 FAM133AQ8N9E0 248 aa27.05■■□□□ 1.92
PMS2P3-201ENST00000394921 LENG1Q96BZ8 264 aaPredicted RBP27.05■■□□□ 1.92
PMS2P3-201ENST00000394921 TRERF1Q96PN7 1200 aa27.05■■□□□ 1.92
PMS2P3-201ENST00000394921 ZKSCAN3Q9BRR0 538 aa27.05■■□□□ 1.92
PMS2P3-201ENST00000394921 GPCPD1Q9NPB8 672 aa27.05■■□□□ 1.92
PMS2P3-201ENST00000394921 XPNPEP3Q9NQH7 507 aa27.05■■□□□ 1.92
PMS2P3-201ENST00000394921 SNHG28P0DPA3 235 aa27.04■■□□□ 1.92
PMS2P3-201ENST00000394921 NT5C2P49902 561 aa27.04■■□□□ 1.92
PMS2P3-201ENST00000394921 SYDE2Q5VT97 1194 aa27.04■■□□□ 1.92
PMS2P3-201ENST00000394921 CDKN2AIPQ9NXV6 580 aaPredicted RBP27.04■■□□□ 1.92
PMS2P3-201ENST00000394921 SZT2Q5T011 3432 aa27.03■■□□□ 1.92
PMS2P3-201ENST00000394921 KDM4AO75164 1064 aa27.03■■□□□ 1.92
PMS2P3-201ENST00000394921 PGK1P00558 417 aa27.03■■□□□ 1.92
PMS2P3-201ENST00000394921 MYCNP04198 464 aaPredicted RBP27.03■■□□□ 1.92
PMS2P3-201ENST00000394921 MUM1L1Q5H9M0 696 aa27.03■■□□□ 1.92
PMS2P3-201ENST00000394921 CTNNA3Q9UI47 895 aa27.03■■□□□ 1.92
PMS2P3-201ENST00000394921 LCTP09848 1927 aa27.02■■□□□ 1.92
PMS2P3-201ENST00000394921 A0A1W2PPC1 479 aa27.02■■□□□ 1.92
PMS2P3-201ENST00000394921 B4E1Z4 1266 aa27.02■■□□□ 1.92
PMS2P3-201ENST00000394921 POTEB2H3BUK9 544 aa27.02■■□□□ 1.92
PMS2P3-201ENST00000394921 ICAM1P05362 532 aa27.02■■□□□ 1.92
PMS2P3-201ENST00000394921 BMP8BP34820 402 aa27.02■■□□□ 1.92
PMS2P3-201ENST00000394921 ADCYAP1R1P41586 468 aa27.02■■□□□ 1.92
PMS2P3-201ENST00000394921 MAGEA10P43363 369 aaPredicted RBP27.02■■□□□ 1.92
PMS2P3-201ENST00000394921 ZNF543Q08ER8 600 aa27.02■■□□□ 1.92
PMS2P3-201ENST00000394921 IMMTQ16891 758 aaKnown RBP27.02■■□□□ 1.92
PMS2P3-201ENST00000394921 ARMCX2Q7L311 632 aa27.02■■□□□ 1.92
PMS2P3-201ENST00000394921 DGKHQ86XP1 1220 aa27.02■■□□□ 1.92
PMS2P3-201ENST00000394921 ZHX1Q9UKY1 873 aaPredicted RBP27.02■■□□□ 1.92
PMS2P3-201ENST00000394921 CCPG1Q9ULG6 757 aa27.02■■□□□ 1.92
PMS2P3-201ENST00000394921 RAD50Q92878 1312 aa27.02■■□□□ 1.92
PMS2P3-201ENST00000394921 LAMA3Q16787 3333 aa27.01■■□□□ 1.91
PMS2P3-201ENST00000394921 SOWAHBA6NEL2 793 aa27.01■■□□□ 1.91
PMS2P3-201ENST00000394921 ADAMTS4O75173 837 aa27.01■■□□□ 1.91
PMS2P3-201ENST00000394921 CHMLP26374 656 aa27.01■■□□□ 1.91
PMS2P3-201ENST00000394921 RTP1P59025 263 aa27.01■■□□□ 1.91
PMS2P3-201ENST00000394921 ACVR2BQ13705 512 aa27.01■■□□□ 1.91
PMS2P3-201ENST00000394921 SLC39A5Q6ZMH5 540 aa27.01■■□□□ 1.91
PMS2P3-201ENST00000394921 KATNBL1Q9H079 304 aa27.01■■□□□ 1.91
PMS2P3-201ENST00000394921 FAM184BQ9ULE4 1060 aa27.01■■□□□ 1.91
PMS2P3-201ENST00000394921 PHF24Q9UPV7 400 aa27.01■■□□□ 1.91
PMS2P3-201ENST00000394921 SNX17Q15036 470 aa27■■□□□ 1.91
PMS2P3-201ENST00000394921 CCDC144CPQ8IYA2 1237 aa27■■□□□ 1.91
PMS2P3-201ENST00000394921 ANKS1AQ92625 1134 aa27■■□□□ 1.91
PMS2P3-201ENST00000394921 FERMT2Q96AC1 680 aa27■■□□□ 1.91
PMS2P3-201ENST00000394921 ABHD16BQ9H3Z7 469 aa27■■□□□ 1.91
PMS2P3-201ENST00000394921 CYP39A1Q9NYL5 469 aa27■■□□□ 1.91
PMS2P3-201ENST00000394921 ZSWIM5Q9P217 1185 aa27■■□□□ 1.91
PMS2P3-201ENST00000394921 ASTN1O14525 1302 aa27■■□□□ 1.91
PMS2P3-201ENST00000394921 ADCY6O43306 1168 aa26.99■■□□□ 1.91
PMS2P3-201ENST00000394921 RNF180Q86T96 592 aa26.99■■□□□ 1.91
PMS2P3-201ENST00000394921 IQCA1Q86XH1 822 aa26.99■■□□□ 1.91
PMS2P3-201ENST00000394921 SYNRGQ9UMZ2 1314 aa26.98■■□□□ 1.91
PMS2P3-201ENST00000394921 CCDC178Q5BJE1 867 aa26.98■■□□□ 1.91
PMS2P3-201ENST00000394921 ENAHQ8N8S7 591 aaPredicted RBP26.98■■□□□ 1.91
PMS2P3-201ENST00000394921 ZSCAN10Q96SZ4 725 aaPredicted RBP26.98■■□□□ 1.91
PMS2P3-201ENST00000394921 LRRC37A2A6NM11 1700 aa26.98■■□□□ 1.91
PMS2P3-201ENST00000394921 PTH1RQ03431 593 aa26.97■■□□□ 1.91
PMS2P3-201ENST00000394921 CCDC144BQ3MJ40 725 aa26.97■■□□□ 1.91
PMS2P3-201ENST00000394921 PNMA1Q8ND90 353 aa26.97■■□□□ 1.91
PMS2P3-201ENST00000394921 KLHDC9Q8NEP7 349 aa26.97■■□□□ 1.91
PMS2P3-201ENST00000394921 ATP11BQ9Y2G3 1177 aa26.97■■□□□ 1.91
PMS2P3-201ENST00000394921 DUSP11O75319 330 aaKnown RBP26.96■■□□□ 1.91
PMS2P3-201ENST00000394921 GOLGA8HP0CJ92 632 aa26.96■■□□□ 1.91
PMS2P3-201ENST00000394921 TRIM60Q495X7 471 aa26.96■■□□□ 1.91
PMS2P3-201ENST00000394921 C1orf53Q5VUE5 145 aa26.96■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms