RNA–Protein interactions for RNA: ENST00000394849.1

UPK3B-203, Transcript of uroplakin 3B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UPK3B, Length 1,041 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-203ENST00000394849 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.6■■□□□ 1.37
UPK3B-203ENST00000394849 TSPYL2Q9H2G4 693 aaPredicted RBP23.6■■□□□ 1.37
UPK3B-203ENST00000394849 BOLA2Q9H3K6 86 aa23.6■■□□□ 1.37
UPK3B-203ENST00000394849 SYNPO2Q9UMS6 1093 aa23.6■■□□□ 1.37
UPK3B-203ENST00000394849 SMIM22K7EJ46 135 aa23.59■■□□□ 1.37
UPK3B-203ENST00000394849 APBB1O00213 710 aa23.59■■□□□ 1.37
UPK3B-203ENST00000394849 CABYRO75952 493 aa23.59■■□□□ 1.37
UPK3B-203ENST00000394849 FDX1P10109 184 aa23.59■■□□□ 1.37
UPK3B-203ENST00000394849 SBK1Q52WX2 424 aa23.59■■□□□ 1.37
UPK3B-203ENST00000394849 GIMAP6Q6P9H5 292 aa23.59■■□□□ 1.37
UPK3B-203ENST00000394849 MKNK2Q9HBH9 465 aa23.59■■□□□ 1.37
UPK3B-203ENST00000394849 MCM3APO60318 1980 aa23.59■■□□□ 1.37
UPK3B-203ENST00000394849 GRXCR1A8MXD5 290 aa23.58■■□□□ 1.37
UPK3B-203ENST00000394849 NDUFB10O96000 172 aa23.58■■□□□ 1.37
UPK3B-203ENST00000394849 CD4P01730 458 aa23.58■■□□□ 1.37
UPK3B-203ENST00000394849 CPXCR1Q8N123 301 aa23.58■■□□□ 1.37
UPK3B-203ENST00000394849 ADAMTS19Q8TE59 1207 aa23.58■■□□□ 1.37
UPK3B-203ENST00000394849 NUP88Q99567 741 aaPredicted RBP23.58■■□□□ 1.37
UPK3B-203ENST00000394849 PPP1R12CQ9BZL4 782 aa23.58■■□□□ 1.37
UPK3B-203ENST00000394849 SLC28A3Q9HAS3 691 aa23.58■■□□□ 1.37
UPK3B-203ENST00000394849 SLC38A10Q9HBR0 1119 aa23.58■■□□□ 1.37
UPK3B-203ENST00000394849 ZNF287Q9HBT7 754 aa23.58■■□□□ 1.37
UPK3B-203ENST00000394849 FEM1BQ9UK73 627 aa23.58■■□□□ 1.37
UPK3B-203ENST00000394849 FGBP02675 491 aa23.57■■□□□ 1.36
UPK3B-203ENST00000394849 ARMCX2Q7L311 632 aa23.57■■□□□ 1.36
UPK3B-203ENST00000394849 ACRP10323 421 aa23.56■■□□□ 1.36
UPK3B-203ENST00000394849 RASA1P20936 1047 aa23.56■■□□□ 1.36
UPK3B-203ENST00000394849 SLC4A3P48751 1232 aa23.56■■□□□ 1.36
UPK3B-203ENST00000394849 SLFNL1Q499Z3 407 aa23.56■■□□□ 1.36
UPK3B-203ENST00000394849 MKL1Q969V6 931 aa23.56■■□□□ 1.36
UPK3B-203ENST00000394849 UHRF1Q96T88 793 aaPredicted RBP23.56■■□□□ 1.36
UPK3B-203ENST00000394849 MYH4Q9Y623 1939 aa23.55■■□□□ 1.36
UPK3B-203ENST00000394849 ADCY6O43306 1168 aa23.55■■□□□ 1.36
UPK3B-203ENST00000394849 IGFBP4P22692 258 aa23.55■■□□□ 1.36
UPK3B-203ENST00000394849 CCDC144CPQ8IYA2 1237 aa23.55■■□□□ 1.36
UPK3B-203ENST00000394849 SLC43A3Q8NBI5 491 aa23.55■■□□□ 1.36
UPK3B-203ENST00000394849 KIFC2Q96AC6 838 aa23.55■■□□□ 1.36
UPK3B-203ENST00000394849 HIPK3Q9H422 1215 aa23.55■■□□□ 1.36
UPK3B-203ENST00000394849 RAVER2Q9HCJ3 691 aaKnown RBP23.55■■□□□ 1.36
UPK3B-203ENST00000394849 CHD7Q9P2D1 2997 aa23.54■■□□□ 1.36
UPK3B-203ENST00000394849 ZEB2O60315 1214 aa23.54■■□□□ 1.36
UPK3B-203ENST00000394849 CYP2C18P33260 490 aa23.54■■□□□ 1.36
UPK3B-203ENST00000394849 TNFAIP2Q03169 654 aa23.54■■□□□ 1.36
UPK3B-203ENST00000394849 ADGRE1Q14246 886 aa23.54■■□□□ 1.36
UPK3B-203ENST00000394849 RPUSD2Q8IZ73 545 aaKnown RBP23.54■■□□□ 1.36
UPK3B-203ENST00000394849 PANK1Q8TE04 598 aa23.54■■□□□ 1.36
UPK3B-203ENST00000394849 FGD4Q96M96 766 aa23.54■■□□□ 1.36
UPK3B-203ENST00000394849 PUS7LQ9H0K6 701 aaKnown RBP23.54■■□□□ 1.36
UPK3B-203ENST00000394849 CLIP2Q9UDT6 1046 aa23.54■■□□□ 1.36
UPK3B-203ENST00000394849 ASB14A6NK59 587 aa23.53■■□□□ 1.36
UPK3B-203ENST00000394849 CTAGE5O15320 804 aa23.53■■□□□ 1.36
UPK3B-203ENST00000394849 AAK1Q2M2I8 961 aa23.53■■□□□ 1.36
UPK3B-203ENST00000394849 STRBPQ96SI9 672 aaKnown RBP23.53■■□□□ 1.36
UPK3B-203ENST00000394849 KATNBL1Q9H079 304 aa23.53■■□□□ 1.36
UPK3B-203ENST00000394849 CHMP4BQ9H444 224 aaKnown RBP23.53■■□□□ 1.36
UPK3B-203ENST00000394849 IRX5P78411 483 aaPredicted RBP23.52■■□□□ 1.36
UPK3B-203ENST00000394849 CCDC85BQ15834 202 aaPredicted RBP23.52■■□□□ 1.36
UPK3B-203ENST00000394849 NOL8Q76FK4 1167 aaKnown RBP23.52■■□□□ 1.36
UPK3B-203ENST00000394849 ZNF444Q8N0Y2 327 aaPredicted RBP23.52■■□□□ 1.36
UPK3B-203ENST00000394849 GMCL1P1Q8NEA9 526 aa23.52■■□□□ 1.36
UPK3B-203ENST00000394849 AP5M1Q9H0R1 490 aa23.52■■□□□ 1.36
UPK3B-203ENST00000394849 BCL11AQ9H165 835 aa23.52■■□□□ 1.36
UPK3B-203ENST00000394849 NKX2-4Q9H2Z4 354 aa23.52■■□□□ 1.36
UPK3B-203ENST00000394849 ACAD9Q9H845 621 aa23.52■■□□□ 1.36
UPK3B-203ENST00000394849 CXXC1Q9P0U4 656 aaPredicted RBP23.52■■□□□ 1.36
UPK3B-203ENST00000394849 IGKV6D-41A0A0C4DH26 115 aa23.51■■□□□ 1.35
UPK3B-203ENST00000394849 ITGA7Q13683 1181 aa23.51■■□□□ 1.35
UPK3B-203ENST00000394849 FAM133AQ8N9E0 248 aa23.51■■□□□ 1.35
UPK3B-203ENST00000394849 DDX19BQ9UMR2 479 aa23.51■■□□□ 1.35
UPK3B-203ENST00000394849 Q9Y3F1 56 aa23.51■■□□□ 1.35
UPK3B-203ENST00000394849 GBF1Q92538 1859 aa23.51■■□□□ 1.35
UPK3B-203ENST00000394849 GSG1L2A8MUP6 293 aa23.5■■□□□ 1.35
UPK3B-203ENST00000394849 MINDY4BA8MYZ0 360 aa23.5■■□□□ 1.35
UPK3B-203ENST00000394849 TTLL1O95922 423 aa23.5■■□□□ 1.35
UPK3B-203ENST00000394849 FSCN1Q16658 493 aaKnown RBP23.5■■□□□ 1.35
UPK3B-203ENST00000394849 TKFCQ3LXA3 575 aa23.5■■□□□ 1.35
UPK3B-203ENST00000394849 CXCL17Q6UXB2 119 aa23.5■■□□□ 1.35
UPK3B-203ENST00000394849 TLK2Q86UE8 772 aa23.5■■□□□ 1.35
UPK3B-203ENST00000394849 C1QTNF1Q9BXJ1 281 aa23.5■■□□□ 1.35
UPK3B-203ENST00000394849 MTMR4Q9NYA4 1195 aa23.5■■□□□ 1.35
UPK3B-203ENST00000394849 GNEQ9Y223 722 aaKnown RBP23.5■■□□□ 1.35
UPK3B-203ENST00000394849 PCDHA11Q9Y5I1 949 aa23.5■■□□□ 1.35
UPK3B-203ENST00000394849 SLC4A7Q9Y6M7 1214 aa23.5■■□□□ 1.35
UPK3B-203ENST00000394849 GNAT2P19087 354 aa23.49■■□□□ 1.35
UPK3B-203ENST00000394849 PLA2G5P39877 138 aa23.49■■□□□ 1.35
UPK3B-203ENST00000394849 BEX3Q00994 111 aa23.49■■□□□ 1.35
UPK3B-203ENST00000394849 OTOP2Q7RTS6 562 aa23.49■■□□□ 1.35
UPK3B-203ENST00000394849 SIRT2Q8IXJ6 389 aa23.49■■□□□ 1.35
UPK3B-203ENST00000394849 CHURC1Q8WUH1 139 aa23.49■■□□□ 1.35
UPK3B-203ENST00000394849 YTHDC1Q96MU7 727 aaKnown RBP23.49■■□□□ 1.35
UPK3B-203ENST00000394849 NOC4LQ9BVI4 516 aaKnown RBP23.49■■□□□ 1.35
UPK3B-203ENST00000394849 ZBTB40Q9NUA8 1239 aa23.49■■□□□ 1.35
UPK3B-203ENST00000394849 YBX2Q9Y2T7 364 aaKnown RBP23.49■■□□□ 1.35
UPK3B-203ENST00000394849 TRANK1O15050 2925 aa23.49■■□□□ 1.35
UPK3B-203ENST00000394849 CHGBP05060 677 aa23.48■■□□□ 1.35
UPK3B-203ENST00000394849 PFKMP08237 780 aa23.48■■□□□ 1.35
UPK3B-203ENST00000394849 BMP3P12645 472 aa23.48■■□□□ 1.35
UPK3B-203ENST00000394849 PPP2R2DQ66LE6 453 aa23.48■■□□□ 1.35
UPK3B-203ENST00000394849 IQSEC1Q6DN90 963 aa23.48■■□□□ 1.35
UPK3B-203ENST00000394849 FAM160B2Q86V87 743 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms