RNA–Protein interactions for RNA: ENST00000394729.6

PRKCD-202, Transcript of protein kinase C delta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCD, Length 2,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-202ENST00000394729 RGPD3A6NKT7 1758 aaPredicted RBP23.14■■□□□ 1.3
PRKCD-202ENST00000394729 RGPD4Q7Z3J3 1758 aa23.14■■□□□ 1.3
PRKCD-202ENST00000394729 NDUFB10O96000 172 aa23.14■■□□□ 1.3
PRKCD-202ENST00000394729 ASPRV1Q53RT3 343 aa23.14■■□□□ 1.3
PRKCD-202ENST00000394729 ZFP91Q96JP5 570 aaPredicted RBP23.14■■□□□ 1.3
PRKCD-202ENST00000394729 POSTNQ15063 836 aa23.14■■□□□ 1.29
PRKCD-202ENST00000394729 MYOZ2Q9NPC6 264 aa23.14■■□□□ 1.29
PRKCD-202ENST00000394729 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.14■■□□□ 1.29
PRKCD-202ENST00000394729 TGFB2P61812 414 aa23.14■■□□□ 1.29
PRKCD-202ENST00000394729 ATP2C1P98194 919 aaPredicted RBP23.14■■□□□ 1.29
PRKCD-202ENST00000394729 PRKG1Q13976 671 aa23.14■■□□□ 1.29
PRKCD-202ENST00000394729 KIAA1755Q5JYT7 1200 aa23.14■■□□□ 1.29
PRKCD-202ENST00000394729 DLK2Q6UY11 383 aa23.14■■□□□ 1.29
PRKCD-202ENST00000394729 CCDC17Q96LX7 622 aa23.14■■□□□ 1.29
PRKCD-202ENST00000394729 RIOX1Q9H6W3 641 aa23.14■■□□□ 1.29
PRKCD-202ENST00000394729 BMP6P22004 513 aa23.13■■□□□ 1.29
PRKCD-202ENST00000394729 LZTS2Q9BRK4 669 aa23.13■■□□□ 1.29
PRKCD-202ENST00000394729 ZMYND12Q9H0C1 365 aa23.13■■□□□ 1.29
PRKCD-202ENST00000394729 EHD4Q9H223 541 aa23.13■■□□□ 1.29
PRKCD-202ENST00000394729 MAPK8IP1Q9UQF2 711 aa23.13■■□□□ 1.29
PRKCD-202ENST00000394729 TDP2O95551 362 aa23.13■■□□□ 1.29
PRKCD-202ENST00000394729 ATP1A3P13637 1013 aa23.13■■□□□ 1.29
PRKCD-202ENST00000394729 FKBP1AP62942 108 aaKnown RBP23.13■■□□□ 1.29
PRKCD-202ENST00000394729 QRICH1Q2TAL8 776 aa23.13■■□□□ 1.29
PRKCD-202ENST00000394729 FILIP1Q7Z7B0 1213 aa23.13■■□□□ 1.29
PRKCD-202ENST00000394729 CREBRFQ8IUR6 639 aa23.13■■□□□ 1.29
PRKCD-202ENST00000394729 MYO1BO43795 1136 aa23.12■■□□□ 1.29
PRKCD-202ENST00000394729 TECP42680 631 aa23.12■■□□□ 1.29
PRKCD-202ENST00000394729 TXKP42681 527 aa23.12■■□□□ 1.29
PRKCD-202ENST00000394729 TMEM179Q6ZVK1 233 aa23.12■■□□□ 1.29
PRKCD-202ENST00000394729 POTEDQ86YR6 584 aa23.12■■□□□ 1.29
PRKCD-202ENST00000394729 MICALL2Q8IY33 904 aa23.12■■□□□ 1.29
PRKCD-202ENST00000394729 PCDHA1Q9Y5I3 950 aa23.12■■□□□ 1.29
PRKCD-202ENST00000394729 GMPSP49915 693 aaPredicted RBP23.12■■□□□ 1.29
PRKCD-202ENST00000394729 STX17P56962 302 aa23.12■■□□□ 1.29
PRKCD-202ENST00000394729 RASA3Q14644 834 aa23.12■■□□□ 1.29
PRKCD-202ENST00000394729 NONOQ15233 471 aaKnown RBP eCLIP23.12■■□□□ 1.29
PRKCD-202ENST00000394729 TATDN1Q6P1N9 297 aa23.12■■□□□ 1.29
PRKCD-202ENST00000394729 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.12■■□□□ 1.29
PRKCD-202ENST00000394729 M0R2N6 131 aa23.11■■□□□ 1.29
PRKCD-202ENST00000394729 PTGS1P23219 599 aa23.11■■□□□ 1.29
PRKCD-202ENST00000394729 GNA11P29992 359 aa23.11■■□□□ 1.29
PRKCD-202ENST00000394729 ADCY7P51828 1080 aa23.11■■□□□ 1.29
PRKCD-202ENST00000394729 ZSCAN30Q86W11 494 aa23.11■■□□□ 1.29
PRKCD-202ENST00000394729 FAM43AQ8N2R8 423 aa23.11■■□□□ 1.29
PRKCD-202ENST00000394729 MRIQ9BWK5 157 aa23.11■■□□□ 1.29
PRKCD-202ENST00000394729 FOCADQ5VW36 1801 aa23.11■■□□□ 1.29
PRKCD-202ENST00000394729 SMC2O95347 1197 aa23.11■■□□□ 1.29
PRKCD-202ENST00000394729 ARID5BQ14865 1188 aa23.11■■□□□ 1.29
PRKCD-202ENST00000394729 CDC37Q16543 378 aaPredicted RBP23.11■■□□□ 1.29
PRKCD-202ENST00000394729 CNTNAP1P78357 1384 aa23.11■■□□□ 1.29
PRKCD-202ENST00000394729 ACTN4O43707 911 aaKnown RBP23.1■■□□□ 1.29
PRKCD-202ENST00000394729 SPDYE2Q495Y8 402 aa23.1■■□□□ 1.29
PRKCD-202ENST00000394729 CCDC174Q6PII3 467 aa23.1■■□□□ 1.29
PRKCD-202ENST00000394729 ARHGAP27Q6ZUM4 889 aa23.1■■□□□ 1.29
PRKCD-202ENST00000394729 SH3GLB2Q9NR46 395 aa23.1■■□□□ 1.29
PRKCD-202ENST00000394729 ENTPD3O75355 529 aa23.1■■□□□ 1.29
PRKCD-202ENST00000394729 SNHG28P0DPA3 235 aa23.1■■□□□ 1.29
PRKCD-202ENST00000394729 HOXA13P31271 388 aaPredicted RBP23.1■■□□□ 1.29
PRKCD-202ENST00000394729 NLRP12P59046 1061 aa23.1■■□□□ 1.29
PRKCD-202ENST00000394729 DTHD1Q6ZMT9 781 aa23.1■■□□□ 1.29
PRKCD-202ENST00000394729 MYH4Q9Y623 1939 aa23.1■■□□□ 1.29
PRKCD-202ENST00000394729 CENPFP49454 3210 aa23.09■■□□□ 1.29
PRKCD-202ENST00000394729 LRMPQ12912 555 aa23.09■■□□□ 1.29
PRKCD-202ENST00000394729 FAM83BQ5T0W9 1011 aa23.09■■□□□ 1.29
PRKCD-202ENST00000394729 CCDC12Q8WUD4 166 aaPredicted RBP23.09■■□□□ 1.29
PRKCD-202ENST00000394729 SMARCE1Q969G3 411 aa23.09■■□□□ 1.29
PRKCD-202ENST00000394729 KIFC2Q96AC6 838 aa23.09■■□□□ 1.29
PRKCD-202ENST00000394729 FBXO28Q9NVF7 368 aa23.09■■□□□ 1.29
PRKCD-202ENST00000394729 CCDC39Q9UFE4 941 aa23.09■■□□□ 1.29
PRKCD-202ENST00000394729 PLIN4Q96Q06 1357 aa23.09■■□□□ 1.29
PRKCD-202ENST00000394729 PNMA6FA0A0J9YX94 578 aa23.09■■□□□ 1.29
PRKCD-202ENST00000394729 NOVP48745 357 aa23.09■■□□□ 1.29
PRKCD-202ENST00000394729 CCDC186Q7Z3E2 898 aa23.09■■□□□ 1.29
PRKCD-202ENST00000394729 NAT10Q9H0A0 1025 aaKnown RBP23.09■■□□□ 1.29
PRKCD-202ENST00000394729 SMCHD1A6NHR9 2005 aa23.09■■□□□ 1.29
PRKCD-202ENST00000394729 ZBTB5O15062 677 aa23.09■■□□□ 1.29
PRKCD-202ENST00000394729 SLC37A4O43826 429 aa23.09■■□□□ 1.29
PRKCD-202ENST00000394729 FAM151AQ8WW52 585 aa23.09■■□□□ 1.29
PRKCD-202ENST00000394729 EEF2KMTQ96G04 330 aa23.09■■□□□ 1.29
PRKCD-202ENST00000394729 PSTPIP2Q9H939 334 aa23.09■■□□□ 1.29
PRKCD-202ENST00000394729 MAN1B1Q9UKM7 699 aa23.09■■□□□ 1.29
PRKCD-202ENST00000394729 QSER1Q2KHR3 1735 aa23.08■■□□□ 1.29
PRKCD-202ENST00000394729 MYO3BQ8WXR4 1341 aa23.08■■□□□ 1.29
PRKCD-202ENST00000394729 NEK8Q86SG6 692 aa23.08■■□□□ 1.29
PRKCD-202ENST00000394729 NEMFO60524 1076 aa23.08■■□□□ 1.28
PRKCD-202ENST00000394729 GPATCH4Q5T3I0 446 aaKnown RBP23.08■■□□□ 1.28
PRKCD-202ENST00000394729 FERMT2Q96AC1 680 aa23.08■■□□□ 1.28
PRKCD-202ENST00000394729 CNOT7Q9UIV1 285 aaKnown RBP23.08■■□□□ 1.28
PRKCD-202ENST00000394729 ZNF75DP51815 510 aa23.07■■□□□ 1.28
PRKCD-202ENST00000394729 SLC30A10Q6XR72 485 aa23.07■■□□□ 1.28
PRKCD-202ENST00000394729 C4orf32Q8N8J7 132 aa23.07■■□□□ 1.28
PRKCD-202ENST00000394729 UPF1Q92900 1129 aaKnown RBP eCLIP23.07■■□□□ 1.28
PRKCD-202ENST00000394729 PAGE5Q96GU1 130 aa23.07■■□□□ 1.28
PRKCD-202ENST00000394729 MARCH6O60337 910 aa23.07■■□□□ 1.28
PRKCD-202ENST00000394729 PTGER2P43116 358 aa23.07■■□□□ 1.28
PRKCD-202ENST00000394729 UBXN2AP68543 259 aa23.07■■□□□ 1.28
PRKCD-202ENST00000394729 MDM2Q00987 491 aaPredicted RBP23.07■■□□□ 1.28
PRKCD-202ENST00000394729 FEZ1Q99689 392 aa23.07■■□□□ 1.28
PRKCD-202ENST00000394729 ZNF541Q9H0D2 1346 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms