RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 CD46P15529 392 aa8□□□□□ -1.13
RTN4-205ENST00000394609 SHMT1P34896 483 aa8□□□□□ -1.13
RTN4-205ENST00000394609 GTF2F1P35269 517 aaKnown RBP eCLIP8□□□□□ -1.13
RTN4-205ENST00000394609 MMP16P51512 607 aa8□□□□□ -1.13
RTN4-205ENST00000394609 UBE2HP62256 183 aa8□□□□□ -1.13
RTN4-205ENST00000394609 AKAP17AQ02040 695 aaKnown RBP8□□□□□ -1.13
RTN4-205ENST00000394609 KIF23Q02241 960 aaPredicted RBP8□□□□□ -1.13
RTN4-205ENST00000394609 RASSF7Q02833 373 aa8□□□□□ -1.13
RTN4-205ENST00000394609 MAP2K5Q13163 448 aa8□□□□□ -1.13
RTN4-205ENST00000394609 PPP2R5BQ15173 497 aa8□□□□□ -1.13
RTN4-205ENST00000394609 DLGAP5Q15398 846 aa8□□□□□ -1.13
RTN4-205ENST00000394609 TREML4Q6UXN2 200 aa8□□□□□ -1.13
RTN4-205ENST00000394609 RNF19BQ6ZMZ0 732 aa8□□□□□ -1.13
RTN4-205ENST00000394609 TMTC3Q6ZXV5 915 aa8□□□□□ -1.13
RTN4-205ENST00000394609 STAG2Q8N3U4 1231 aa8□□□□□ -1.13
RTN4-205ENST00000394609 LEO1Q8WVC0 666 aaPredicted RBP8□□□□□ -1.13
RTN4-205ENST00000394609 ANKS1AQ92625 1134 aa8□□□□□ -1.13
RTN4-205ENST00000394609 USP28Q96RU2 1077 aa8□□□□□ -1.13
RTN4-205ENST00000394609 IDI2Q9BXS1 227 aa8□□□□□ -1.13
RTN4-205ENST00000394609 SCAND2PQ9GZW5 306 aaPredicted RBP8□□□□□ -1.13
RTN4-205ENST00000394609 VPS33BQ9H267 617 aa8□□□□□ -1.13
RTN4-205ENST00000394609 RBM28Q9NW13 759 aaKnown RBP8□□□□□ -1.13
RTN4-205ENST00000394609 TMEM63CQ9P1W3 806 aa8□□□□□ -1.13
RTN4-205ENST00000394609 STK36Q9NRP7 1315 aa8□□□□□ -1.13
RTN4-205ENST00000394609 DEXIO95424 95 aa8□□□□□ -1.13
RTN4-205ENST00000394609 GOLGA8HP0CJ92 632 aa8□□□□□ -1.13
RTN4-205ENST00000394609 PRELPP51888 382 aa8□□□□□ -1.13
RTN4-205ENST00000394609 GNL2Q13823 731 aaKnown RBP8□□□□□ -1.13
RTN4-205ENST00000394609 PKN1Q16512 942 aa8□□□□□ -1.13
RTN4-205ENST00000394609 SHROOM1Q2M3G4 852 aaPredicted RBP8□□□□□ -1.13
RTN4-205ENST00000394609 ZSCAN23Q3MJ62 389 aa8□□□□□ -1.13
RTN4-205ENST00000394609 CCDC178Q5BJE1 867 aa8□□□□□ -1.13
RTN4-205ENST00000394609 CIAPIN1Q6FI81 312 aa8□□□□□ -1.13
RTN4-205ENST00000394609 WASF1Q92558 559 aa8□□□□□ -1.13
RTN4-205ENST00000394609 CCDC94Q9BW85 323 aaPredicted RBP8□□□□□ -1.13
RTN4-205ENST00000394609 RNF26Q9BY78 433 aaPredicted RBP8□□□□□ -1.13
RTN4-205ENST00000394609 GTPBP4Q9BZE4 634 aaKnown RBP8□□□□□ -1.13
RTN4-205ENST00000394609 DHX36Q9H2U1 1008 aaKnown RBP8□□□□□ -1.13
RTN4-205ENST00000394609 DNAJC18Q9H819 358 aa8□□□□□ -1.13
RTN4-205ENST00000394609 VPS54Q9P1Q0 977 aa8□□□□□ -1.13
RTN4-205ENST00000394609 PI4KBQ9UBF8 816 aa8□□□□□ -1.13
RTN4-205ENST00000394609 HDAC9Q9UKV0 1011 aa8□□□□□ -1.13
RTN4-205ENST00000394609 CFAP45Q9UL16 551 aa8□□□□□ -1.13
RTN4-205ENST00000394609 MYO3BQ8WXR4 1341 aa8□□□□□ -1.13
RTN4-205ENST00000394609 ADAMTSL1Q8N6G6 1762 aa8□□□□□ -1.13
RTN4-205ENST00000394609 UQCRHLA0A096LP55 91 aa7.99□□□□□ -1.13
RTN4-205ENST00000394609 BTBD18B2RXH4 712 aa7.99□□□□□ -1.13
RTN4-205ENST00000394609 KIF20AO95235 890 aa7.99□□□□□ -1.13
RTN4-205ENST00000394609 UQCRHP07919 91 aa7.99□□□□□ -1.13
RTN4-205ENST00000394609 VEGFAP15692 232 aaPredicted RBP7.99□□□□□ -1.13
RTN4-205ENST00000394609 KIF5BP33176 963 aa7.99□□□□□ -1.13
RTN4-205ENST00000394609 NT5C2P49902 561 aa7.99□□□□□ -1.13
RTN4-205ENST00000394609 ATP2B2Q01814 1243 aa7.99□□□□□ -1.13
RTN4-205ENST00000394609 USP17L2Q6R6M4 530 aa7.99□□□□□ -1.13
RTN4-205ENST00000394609 LRRC47Q8N1G4 583 aaKnown RBP7.99□□□□□ -1.13
RTN4-205ENST00000394609 SNIP1Q8TAD8 396 aaKnown RBP7.99□□□□□ -1.13
RTN4-205ENST00000394609 SHISA4Q96DD7 197 aa7.99□□□□□ -1.13
RTN4-205ENST00000394609 ZNF396Q96N95 335 aaPredicted RBP7.99□□□□□ -1.13
RTN4-205ENST00000394609 CPVLQ9H3G5 476 aa7.99□□□□□ -1.13
RTN4-205ENST00000394609 VEZTQ9HBM0 779 aa7.99□□□□□ -1.13
RTN4-205ENST00000394609 SPON1Q9HCB6 807 aa7.99□□□□□ -1.13
RTN4-205ENST00000394609 MTMR4Q9NYA4 1195 aa7.99□□□□□ -1.13
RTN4-205ENST00000394609 ZNF70Q9UC06 446 aaPredicted RBP7.99□□□□□ -1.13
RTN4-205ENST00000394609 CLIP2Q9UDT6 1046 aa7.99□□□□□ -1.13
RTN4-205ENST00000394609 SWAP70Q9UH65 585 aa7.99□□□□□ -1.13
RTN4-205ENST00000394609 MAD2L2Q9UI95 211 aa7.99□□□□□ -1.13
RTN4-205ENST00000394609 SCAF8Q9UPN6 1271 aaKnown RBP7.99□□□□□ -1.13
RTN4-205ENST00000394609 GOLGA6L4A6NEF3 574 aa7.98□□□□□ -1.13
RTN4-205ENST00000394609 PRPF3O43395 683 aaKnown RBP7.98□□□□□ -1.13
RTN4-205ENST00000394609 MMP1P03956 469 aa7.98□□□□□ -1.13
RTN4-205ENST00000394609 TOP1P11387 765 aaKnown RBP7.98□□□□□ -1.13
RTN4-205ENST00000394609 DMTNQ08495 405 aa7.98□□□□□ -1.13
RTN4-205ENST00000394609 NR5A1Q13285 461 aa7.98□□□□□ -1.13
RTN4-205ENST00000394609 NBPF9Q3BBW0 867 aa7.98□□□□□ -1.13
RTN4-205ENST00000394609 MYSM1Q5VVJ2 828 aa7.98□□□□□ -1.13
RTN4-205ENST00000394609 LRSAM1Q6UWE0 723 aa7.98□□□□□ -1.13
RTN4-205ENST00000394609 BRAPQ7Z569 592 aa7.98□□□□□ -1.13
RTN4-205ENST00000394609 DIS3L2Q8IYB7 885 aaKnown RBP7.98□□□□□ -1.13
RTN4-205ENST00000394609 AGBL3Q8NEM8 1001 aa7.98□□□□□ -1.13
RTN4-205ENST00000394609 PGBD1Q96JS3 809 aa7.98□□□□□ -1.13
RTN4-205ENST00000394609 REPIN1Q9BWE0 567 aaKnown RBP7.98□□□□□ -1.13
RTN4-205ENST00000394609 TRIM34Q9BYJ4 488 aa7.98□□□□□ -1.13
RTN4-205ENST00000394609 EHD4Q9H223 541 aa7.98□□□□□ -1.13
RTN4-205ENST00000394609 TMOD2Q9NZR1 351 aa7.98□□□□□ -1.13
RTN4-205ENST00000394609 CLIC4Q9Y696 253 aa7.98□□□□□ -1.13
RTN4-205ENST00000394609 GJA3Q9Y6H8 435 aa7.98□□□□□ -1.13
RTN4-205ENST00000394609 DLEC1Q9Y238 1755 aa7.98□□□□□ -1.13
RTN4-205ENST00000394609 SYCE3A1L190 88 aa7.98□□□□□ -1.13
RTN4-205ENST00000394609 USP17L5A8MUK1 530 aa7.98□□□□□ -1.13
RTN4-205ENST00000394609 ELP1O95163 1332 aa7.98□□□□□ -1.13
RTN4-205ENST00000394609 GDF11O95390 407 aa7.98□□□□□ -1.13
RTN4-205ENST00000394609 EGFRP00533 1210 aa7.98□□□□□ -1.13
RTN4-205ENST00000394609 U2AF2P26368 475 aaKnown RBP eCLIP7.98□□□□□ -1.137e-8■■□□□ 13
RTN4-205ENST00000394609 GRM4Q14833 912 aa7.98□□□□□ -1.13
RTN4-205ENST00000394609 SAFBQ15424 915 aaKnown RBP eCLIP7.98□□□□□ -1.13
RTN4-205ENST00000394609 SLC35G1Q2M3R5 365 aa7.98□□□□□ -1.13
RTN4-205ENST00000394609 UVSSAQ2YD98 709 aa7.98□□□□□ -1.13
RTN4-205ENST00000394609 CERKLQ49MI3 558 aaPredicted RBP7.98□□□□□ -1.13
RTN4-205ENST00000394609 NAV1Q8NEY1 1877 aa7.98□□□□□ -1.13
RTN4-205ENST00000394609 MYRIPQ8NFW9 859 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms