RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 WWC2Q6AWC2 1192 aa15.22■□□□□ 0.03
GTF2F1-201ENST00000394456 RSRC2Q7L4I2 434 aaKnown RBP15.22■□□□□ 0.03
GTF2F1-201ENST00000394456 HEATR3Q7Z4Q2 680 aa15.22■□□□□ 0.03
GTF2F1-201ENST00000394456 CRAMP1Q96RY5 1269 aa15.22■□□□□ 0.03
GTF2F1-201ENST00000394456 KAT14Q9H8E8 782 aa15.22■□□□□ 0.03
GTF2F1-201ENST00000394456 COPB1P53618 953 aaKnown RBP15.22■□□□□ 0.03
GTF2F1-201ENST00000394456 SLC35F6Q8N357 371 aa15.22■□□□□ 0.03
GTF2F1-201ENST00000394456 SLF1Q9BQI6 1058 aa15.22■□□□□ 0.03
GTF2F1-201ENST00000394456 MKNK2Q9HBH9 465 aa15.22■□□□□ 0.03
GTF2F1-201ENST00000394456 PODXL2Q9NZ53 605 aa15.22■□□□□ 0.03
GTF2F1-201ENST00000394456 KCNJ18B7U540 433 aa15.21■□□□□ 0.03
GTF2F1-201ENST00000394456 LDHCP07864 332 aa15.21■□□□□ 0.03
GTF2F1-201ENST00000394456 GTF2IP78347 998 aa15.21■□□□□ 0.03
GTF2F1-201ENST00000394456 PAK1Q13153 545 aa15.21■□□□□ 0.03
GTF2F1-201ENST00000394456 KCNJ12Q14500 433 aa15.21■□□□□ 0.03
GTF2F1-201ENST00000394456 MAD2L2Q9UI95 211 aa15.21■□□□□ 0.03
GTF2F1-201ENST00000394456 F8W031 263 aaPredicted RBP15.21■□□□□ 0.02
GTF2F1-201ENST00000394456 GTPBP6O43824 516 aaPredicted RBP15.21■□□□□ 0.02
GTF2F1-201ENST00000394456 TUBB4AP04350 444 aa15.21■□□□□ 0.02
GTF2F1-201ENST00000394456 PPP4CP60510 307 aa15.21■□□□□ 0.02
GTF2F1-201ENST00000394456 CC2D1AQ6P1N0 951 aaPredicted RBP15.21■□□□□ 0.02
GTF2F1-201ENST00000394456 HPS3Q969F9 1004 aa15.21■□□□□ 0.02
GTF2F1-201ENST00000394456 PCDHA6Q9UN73 950 aa15.21■□□□□ 0.02
GTF2F1-201ENST00000394456 STX8Q9UNK0 236 aa15.21■□□□□ 0.02
GTF2F1-201ENST00000394456 PCDHA8Q9Y5H6 950 aa15.21■□□□□ 0.02
GTF2F1-201ENST00000394456 LTBP1Q14766 1721 aa15.21■□□□□ 0.02
GTF2F1-201ENST00000394456 LRRC37AA6NMS7 1700 aa15.2■□□□□ 0.02
GTF2F1-201ENST00000394456 KLRG2A4D1S0 409 aaPredicted RBP15.2■□□□□ 0.02
GTF2F1-201ENST00000394456 PES1O00541 588 aaKnown RBP15.2■□□□□ 0.02
GTF2F1-201ENST00000394456 STAT6P42226 847 aa15.2■□□□□ 0.02
GTF2F1-201ENST00000394456 KLK7P49862 253 aa15.2■□□□□ 0.02
GTF2F1-201ENST00000394456 TCP11X2Q5H9J9 407 aa15.2■□□□□ 0.02
GTF2F1-201ENST00000394456 TEX11Q8IYF3 940 aa15.2■□□□□ 0.02
GTF2F1-201ENST00000394456 NUP88Q99567 741 aaPredicted RBP15.2■□□□□ 0.02
GTF2F1-201ENST00000394456 SUGCTQ9HAC7 445 aa15.2■□□□□ 0.02
GTF2F1-201ENST00000394456 MYH1P12882 1939 aa15.2■□□□□ 0.02
GTF2F1-201ENST00000394456 ZBTB22O15209 634 aa15.2■□□□□ 0.02
GTF2F1-201ENST00000394456 TMED8Q6PL24 325 aaPredicted RBP15.2■□□□□ 0.02
GTF2F1-201ENST00000394456 AMOTL1Q8IY63 956 aa15.2■□□□□ 0.02
GTF2F1-201ENST00000394456 RASSF8Q8NHQ8 419 aa15.2■□□□□ 0.02
GTF2F1-201ENST00000394456 ABHD10Q9NUJ1 306 aa15.2■□□□□ 0.02
GTF2F1-201ENST00000394456 MMP10P09238 476 aa15.19■□□□□ 0.02
GTF2F1-201ENST00000394456 TSPY3P0CV98 308 aa15.19■□□□□ 0.02
GTF2F1-201ENST00000394456 TSPY8P0CW00 308 aa15.19■□□□□ 0.02
GTF2F1-201ENST00000394456 ARHGAP25P42331 645 aa15.19■□□□□ 0.02
GTF2F1-201ENST00000394456 AKT1S1Q96B36 256 aa15.19■□□□□ 0.02
GTF2F1-201ENST00000394456 PNKPQ96T60 521 aa15.19■□□□□ 0.02
GTF2F1-201ENST00000394456 MXD3Q9BW11 206 aa15.19■□□□□ 0.02
GTF2F1-201ENST00000394456 SRRTQ9BXP5 876 aaKnown RBP15.19■□□□□ 0.02
GTF2F1-201ENST00000394456 LIMA1Q9UHB6 759 aaKnown RBP15.19■□□□□ 0.02
GTF2F1-201ENST00000394456 PCDHA4Q9UN74 947 aa15.19■□□□□ 0.02
GTF2F1-201ENST00000394456 REXO2Q9Y3B8 237 aaKnown RBP15.19■□□□□ 0.02
GTF2F1-201ENST00000394456 SRGNP10124 158 aa15.19■□□□□ 0.02
GTF2F1-201ENST00000394456 KRT9P35527 623 aa15.19■□□□□ 0.02
GTF2F1-201ENST00000394456 UBXN1Q04323 297 aa15.19■□□□□ 0.02
GTF2F1-201ENST00000394456 FILIP1LQ4L180 1135 aa15.19■□□□□ 0.02
GTF2F1-201ENST00000394456 SP8Q8IXZ3 490 aa15.19■□□□□ 0.02
GTF2F1-201ENST00000394456 NLGN1Q8N2Q7 840 aa15.19■□□□□ 0.02
GTF2F1-201ENST00000394456 VAT1LQ9HCJ6 419 aa15.19■□□□□ 0.02
GTF2F1-201ENST00000394456 RWDD2AQ9UIY3 292 aa15.19■□□□□ 0.02
GTF2F1-201ENST00000394456 GPR75-ASB3A0A0A6YYF3 556 aa15.18■□□□□ 0.02
GTF2F1-201ENST00000394456 M0R2N6 131 aa15.18■□□□□ 0.02
GTF2F1-201ENST00000394456 BMP15O95972 392 aa15.18■□□□□ 0.02
GTF2F1-201ENST00000394456 DOK7Q18PE1 504 aa15.18■□□□□ 0.02
GTF2F1-201ENST00000394456 ZNF658Q5TYW1 1059 aaPredicted RBP15.18■□□□□ 0.02
GTF2F1-201ENST00000394456 DISC1Q9NRI5 854 aa15.18■□□□□ 0.02
GTF2F1-201ENST00000394456 ATP6V0A2Q9Y487 856 aa15.18■□□□□ 0.02
GTF2F1-201ENST00000394456 COL11A2P13942 1736 aaPredicted RBP15.18■□□□□ 0.02
GTF2F1-201ENST00000394456 TTC26A0AVF1 554 aa15.18■□□□□ 0.02
GTF2F1-201ENST00000394456 KLRC4O43908 158 aa15.18■□□□□ 0.02
GTF2F1-201ENST00000394456 KIF20AO95235 890 aa15.18■□□□□ 0.02
GTF2F1-201ENST00000394456 PARP1P09874 1014 aaKnown RBP15.18■□□□□ 0.02
GTF2F1-201ENST00000394456 KIF4BQ2VIQ3 1234 aa15.18■□□□□ 0.02
GTF2F1-201ENST00000394456 ZNF444Q8N0Y2 327 aaPredicted RBP15.18■□□□□ 0.02
GTF2F1-201ENST00000394456 TMEM47Q9BQJ4 181 aa15.18■□□□□ 0.02
GTF2F1-201ENST00000394456 FLT1P17948 1338 aa15.18■□□□□ 0.02
GTF2F1-201ENST00000394456 CCDC194A0A1B0GVG4 234 aa15.17■□□□□ 0.02
GTF2F1-201ENST00000394456 GOLGA6L9A6NEM1 432 aa15.17■□□□□ 0.02
GTF2F1-201ENST00000394456 USP17L2Q6R6M4 530 aa15.17■□□□□ 0.02
GTF2F1-201ENST00000394456 ANKZF1Q9H8Y5 726 aa15.17■□□□□ 0.02
GTF2F1-201ENST00000394456 MYH8P13535 1937 aa15.17■□□□□ 0.02
GTF2F1-201ENST00000394456 ROBO3Q96MS0 1386 aa15.17■□□□□ 0.02
GTF2F1-201ENST00000394456 DDX60LQ5H9U9 1706 aaKnown RBP15.17■□□□□ 0.02
GTF2F1-201ENST00000394456 UTRNP46939 3433 aa15.17■□□□□ 0.02
GTF2F1-201ENST00000394456 STXBP3O00186 592 aa15.17■□□□□ 0.02
GTF2F1-201ENST00000394456 PLSCR1O15162 318 aa15.17■□□□□ 0.02
GTF2F1-201ENST00000394456 RHOXF2BP0C7M4 288 aa15.17■□□□□ 0.02
GTF2F1-201ENST00000394456 ERCC3P19447 782 aa15.17■□□□□ 0.02
GTF2F1-201ENST00000394456 RASA1P20936 1047 aa15.17■□□□□ 0.02
GTF2F1-201ENST00000394456 RHBDL3P58872 404 aa15.17■□□□□ 0.02
GTF2F1-201ENST00000394456 CHMP4BP1P59074 171 aa15.17■□□□□ 0.02
GTF2F1-201ENST00000394456 RHOXF2Q9BQY4 288 aa15.17■□□□□ 0.02
GTF2F1-201ENST00000394456 RNF216Q9NWF9 866 aaPredicted RBP15.17■□□□□ 0.02
GTF2F1-201ENST00000394456 HDAC6Q9UBN7 1215 aa15.17■□□□□ 0.02
GTF2F1-201ENST00000394456 ENC1O14682 589 aa15.16■□□□□ 0.02
GTF2F1-201ENST00000394456 KIF5CO60282 957 aa15.16■□□□□ 0.02
GTF2F1-201ENST00000394456 GRM4Q14833 912 aa15.16■□□□□ 0.02
GTF2F1-201ENST00000394456 NCAPH2Q6IBW4 605 aa15.16■□□□□ 0.02
GTF2F1-201ENST00000394456 CLEC10AQ8IUN9 316 aa15.16■□□□□ 0.02
GTF2F1-201ENST00000394456 ADSSL1Q8N142 457 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms