RNA–Protein interactions for RNA: ENST00000394089.6

RARA-204, Transcript of retinoic acid receptor alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RARA, Length 2,024 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-204ENST00000394089 CCDC12Q8WUD4 166 aaPredicted RBP26.33■■□□□ 1.81
RARA-204ENST00000394089 TRIM5Q9C035 493 aa26.33■■□□□ 1.81
RARA-204ENST00000394089 SEC63Q9UGP8 760 aaKnown RBP26.33■■□□□ 1.81
RARA-204ENST00000394089 BMP15O95972 392 aa26.32■■□□□ 1.8
RARA-204ENST00000394089 ATP2B2Q01814 1243 aa26.32■■□□□ 1.8
RARA-204ENST00000394089 RASSF7Q02833 373 aa26.32■■□□□ 1.8
RARA-204ENST00000394089 MYH4Q9Y623 1939 aa26.32■■□□□ 1.8
RARA-204ENST00000394089 hCG_1984214I3L0E3 225 aa26.32■■□□□ 1.8
RARA-204ENST00000394089 KIF2AO00139 706 aaPredicted RBP26.32■■□□□ 1.8
RARA-204ENST00000394089 PTPREP23469 700 aa26.32■■□□□ 1.8
RARA-204ENST00000394089 SEPT2Q15019 361 aa26.32■■□□□ 1.8
RARA-204ENST00000394089 RBM26Q5T8P6 1007 aaKnown RBP26.32■■□□□ 1.8
RARA-204ENST00000394089 ZNF713Q8N859 430 aaPredicted RBP26.32■■□□□ 1.8
RARA-204ENST00000394089 MRFAP1L1Q96HT8 127 aa26.32■■□□□ 1.8
RARA-204ENST00000394089 UBA5Q9GZZ9 404 aa26.32■■□□□ 1.8
RARA-204ENST00000394089 VEZTQ9HBM0 779 aa26.32■■□□□ 1.8
RARA-204ENST00000394089 M0R2N6 131 aa26.31■■□□□ 1.8
RARA-204ENST00000394089 FZD9O00144 591 aa26.31■■□□□ 1.8
RARA-204ENST00000394089 WNT10BO00744 389 aa26.31■■□□□ 1.8
RARA-204ENST00000394089 SOCS7O14512 581 aa26.31■■□□□ 1.8
RARA-204ENST00000394089 RESP18Q5W5W9 173 aa26.31■■□□□ 1.8
RARA-204ENST00000394089 SHC4Q6S5L8 630 aa26.31■■□□□ 1.8
RARA-204ENST00000394089 LRRC8AQ8IWT6 810 aa26.31■■□□□ 1.8
RARA-204ENST00000394089 CKAP2LQ8IYA6 745 aa26.31■■□□□ 1.8
RARA-204ENST00000394089 PIGSQ96S52 555 aa26.31■■□□□ 1.8
RARA-204ENST00000394089 XPO5Q9HAV4 1204 aaKnown RBP eCLIP26.31■■□□□ 1.82e-6■■■□□ 17.1
RARA-204ENST00000394089 FBXO2Q9UK22 296 aaPredicted RBP26.31■■□□□ 1.8
RARA-204ENST00000394089 ZNF215Q9UL58 517 aaPredicted RBP26.31■■□□□ 1.8
RARA-204ENST00000394089 HPSEQ9Y251 543 aa26.31■■□□□ 1.8
RARA-204ENST00000394089 PFKFB1P16118 471 aa26.31■■□□□ 1.8
RARA-204ENST00000394089 ICA1Q05084 483 aa26.31■■□□□ 1.8
RARA-204ENST00000394089 SHROOM1Q2M3G4 852 aaPredicted RBP26.31■■□□□ 1.8
RARA-204ENST00000394089 FBXO38Q6PIJ6 1188 aa26.31■■□□□ 1.8
RARA-204ENST00000394089 SIAH1Q8IUQ4 282 aa26.31■■□□□ 1.8
RARA-204ENST00000394089 DRC7Q8IY82 874 aa26.31■■□□□ 1.8
RARA-204ENST00000394089 DCAF4Q8WV16 495 aa26.31■■□□□ 1.8
RARA-204ENST00000394089 TBC1D12O60347 775 aa26.3■■□□□ 1.8
RARA-204ENST00000394089 GDF11O95390 407 aa26.3■■□□□ 1.8
RARA-204ENST00000394089 PRELPP51888 382 aa26.3■■□□□ 1.8
RARA-204ENST00000394089 ZMYND12Q9H0C1 365 aa26.3■■□□□ 1.8
RARA-204ENST00000394089 VAT1LQ9HCJ6 419 aa26.3■■□□□ 1.8
RARA-204ENST00000394089 GPCPD1Q9NPB8 672 aa26.3■■□□□ 1.8
RARA-204ENST00000394089 ATP2B1P20020 1258 aa26.29■■□□□ 1.8
RARA-204ENST00000394089 CYP2C19P33261 490 aa26.29■■□□□ 1.8
RARA-204ENST00000394089 NOM1Q5C9Z4 860 aaKnown RBP26.29■■□□□ 1.8
RARA-204ENST00000394089 TTC38Q5R3I4 469 aa26.29■■□□□ 1.8
RARA-204ENST00000394089 PIK3AP1Q6ZUJ8 805 aa26.29■■□□□ 1.8
RARA-204ENST00000394089 HOMER1Q86YM7 354 aa26.29■■□□□ 1.8
RARA-204ENST00000394089 ZNF579Q8NAF0 562 aaKnown RBP26.29■■□□□ 1.8
RARA-204ENST00000394089 DPF2Q92785 391 aa26.29■■□□□ 1.8
RARA-204ENST00000394089 SRPRBQ9Y5M8 271 aaKnown RBP26.29■■□□□ 1.8
RARA-204ENST00000394089 ADAMTS3O15072 1205 aa26.29■■□□□ 1.8
RARA-204ENST00000394089 RRP1BQ14684 758 aaKnown RBP26.29■■□□□ 1.8
RARA-204ENST00000394089 NBPF9Q3BBW0 867 aa26.29■■□□□ 1.8
RARA-204ENST00000394089 CLIC6Q96NY7 704 aa26.29■■□□□ 1.8
RARA-204ENST00000394089 SYNPO2Q9UMS6 1093 aa26.29■■□□□ 1.8
RARA-204ENST00000394089 H2AFXP16104 143 aaPredicted RBP26.28■■□□□ 1.8
RARA-204ENST00000394089 NAPAP54920 295 aa26.28■■□□□ 1.8
RARA-204ENST00000394089 CCDC144BQ3MJ40 725 aa26.28■■□□□ 1.8
RARA-204ENST00000394089 SPON1Q9HCB6 807 aa26.28■■□□□ 1.8
RARA-204ENST00000394089 PGAP2Q9UHJ9 254 aa26.28■■□□□ 1.8
RARA-204ENST00000394089 ESYT2A0FGR8 921 aa26.27■■□□□ 1.8
RARA-204ENST00000394089 SHTN1A0MZ66 631 aa26.27■■□□□ 1.8
RARA-204ENST00000394089 ZNF202O95125 648 aa26.27■■□□□ 1.8
RARA-204ENST00000394089 GH2P01242 217 aa26.27■■□□□ 1.8
RARA-204ENST00000394089 JAG1P78504 1218 aa26.27■■□□□ 1.8
RARA-204ENST00000394089 PTPN14Q15678 1187 aa26.27■■□□□ 1.8
RARA-204ENST00000394089 CCDC96Q2M329 555 aa26.27■■□□□ 1.8
RARA-204ENST00000394089 GMCL1P1Q8NEA9 526 aa26.27■■□□□ 1.8
RARA-204ENST00000394089 PCDHA6Q9UN73 950 aa26.27■■□□□ 1.8
RARA-204ENST00000394089 PCDHA8Q9Y5H6 950 aa26.27■■□□□ 1.8
RARA-204ENST00000394089 SLU7O95391 586 aaKnown RBP26.27■■□□□ 1.8
RARA-204ENST00000394089 SLFN13Q68D06 897 aa26.27■■□□□ 1.8
RARA-204ENST00000394089 JMJD4Q9H9V9 463 aa26.27■■□□□ 1.8
RARA-204ENST00000394089 C6orf50Q9HD87 102 aa26.27■■□□□ 1.8
RARA-204ENST00000394089 GNA11P29992 359 aa26.26■■□□□ 1.79
RARA-204ENST00000394089 TNNI2P48788 182 aa26.26■■□□□ 1.79
RARA-204ENST00000394089 GMPSP49915 693 aaPredicted RBP26.26■■□□□ 1.79
RARA-204ENST00000394089 BMS1Q14692 1282 aaKnown RBP26.26■■□□□ 1.79
RARA-204ENST00000394089 ADGRF4Q8IZF3 695 aa26.26■■□□□ 1.79
RARA-204ENST00000394089 TMEM39BQ9GZU3 492 aa26.26■■□□□ 1.79
RARA-204ENST00000394089 SYKP43405 635 aa26.26■■□□□ 1.79
RARA-204ENST00000394089 ZNF165P49910 485 aa26.26■■□□□ 1.79
RARA-204ENST00000394089 TTBK2Q6IQ55 1244 aa26.26■■□□□ 1.79
RARA-204ENST00000394089 MTMR8Q96EF0 704 aa26.26■■□□□ 1.79
RARA-204ENST00000394089 L2HGDHQ9H9P8 463 aa26.26■■□□□ 1.79
RARA-204ENST00000394089 PNMA6FA0A0J9YX94 578 aa26.25■■□□□ 1.79
RARA-204ENST00000394089 SMCO2A6NFE2 343 aa26.25■■□□□ 1.79
RARA-204ENST00000394089 MAP3K10Q02779 954 aa26.25■■□□□ 1.79
RARA-204ENST00000394089 SDF4Q9BRK5 362 aa26.25■■□□□ 1.79
RARA-204ENST00000394089 CCDC194A0A1B0GVG4 234 aa26.24■■□□□ 1.79
RARA-204ENST00000394089 WNT7AO00755 349 aa26.24■■□□□ 1.79
RARA-204ENST00000394089 SLC1A4P43007 532 aa26.24■■□□□ 1.79
RARA-204ENST00000394089 ZNF174Q15697 407 aa26.24■■□□□ 1.79
RARA-204ENST00000394089 KCTD1Q719H9 257 aa26.24■■□□□ 1.79
RARA-204ENST00000394089 FERMT2Q96AC1 680 aa26.24■■□□□ 1.79
RARA-204ENST00000394089 GMCL1Q96IK5 515 aa26.24■■□□□ 1.79
RARA-204ENST00000394089 IQCB1Q15051 598 aa26.24■■□□□ 1.79
RARA-204ENST00000394089 PPP1R18Q6NYC8 613 aa26.24■■□□□ 1.79
RARA-204ENST00000394089 MICALL2Q8IY33 904 aa26.24■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms