RNA–Protein interactions for RNA: ENST00000393158.6

PDGFD-202, Transcript of platelet derived growth factor D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDGFD, Length 3,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFD-202ENST00000393158 MCM3APO60318 1980 aa12.44□□□□□ -0.42
PDGFD-202ENST00000393158 GNAQP50148 359 aa12.44□□□□□ -0.42
PDGFD-202ENST00000393158 CDC37Q16543 378 aaPredicted RBP12.44□□□□□ -0.42
PDGFD-202ENST00000393158 TMEM260Q9NX78 707 aa12.44□□□□□ -0.42
PDGFD-202ENST00000393158 TMEM232C9JQI7 657 aa12.44□□□□□ -0.42
PDGFD-202ENST00000393158 TRIM22Q8IYM9 498 aa12.44□□□□□ -0.42
PDGFD-202ENST00000393158 CLEC4DQ8WXI8 215 aa12.44□□□□□ -0.42
PDGFD-202ENST00000393158 KCNH4Q9UQ05 1017 aa12.44□□□□□ -0.42
PDGFD-202ENST00000393158 FAM237AA0A1B0GTK4 181 aa12.43□□□□□ -0.42
PDGFD-202ENST00000393158 ZYXQ15942 572 aaKnown RBP12.43□□□□□ -0.42
PDGFD-202ENST00000393158 FAM177A1Q8N128 213 aaPredicted RBP12.43□□□□□ -0.42
PDGFD-202ENST00000393158 ZNF280CQ8ND82 737 aa12.43□□□□□ -0.42
PDGFD-202ENST00000393158 A0A0G2JLL6 359 aaPredicted RBP12.43□□□□□ -0.42
PDGFD-202ENST00000393158 IRF6O14896 467 aa12.43□□□□□ -0.42
PDGFD-202ENST00000393158 PEX10O60683 326 aa12.43□□□□□ -0.42
PDGFD-202ENST00000393158 KLHL40Q2TBA0 621 aa12.43□□□□□ -0.42
PDGFD-202ENST00000393158 GPAT2Q6NUI2 795 aa12.43□□□□□ -0.42
PDGFD-202ENST00000393158 PRRT2Q7Z6L0 340 aaPredicted RBP12.43□□□□□ -0.42
PDGFD-202ENST00000393158 TBC1D5Q92609 795 aa12.43□□□□□ -0.42
PDGFD-202ENST00000393158 PCDHA7Q9UN72 937 aa12.43□□□□□ -0.42
PDGFD-202ENST00000393158 ATP2B2Q01814 1243 aa12.43□□□□□ -0.42
PDGFD-202ENST00000393158 SPP2Q13103 211 aa12.43□□□□□ -0.42
PDGFD-202ENST00000393158 SYDE2Q5VT97 1194 aa12.43□□□□□ -0.42
PDGFD-202ENST00000393158 BBXQ8WY36 941 aaPredicted RBP12.43□□□□□ -0.42
PDGFD-202ENST00000393158 DCPSQ96C86 337 aaKnown RBP12.43□□□□□ -0.42
PDGFD-202ENST00000393158 MS4A4AQ96JQ5 239 aa12.43□□□□□ -0.42
PDGFD-202ENST00000393158 SLC38A10Q9HBR0 1119 aa12.43□□□□□ -0.42
PDGFD-202ENST00000393158 FBXO2Q9UK22 296 aaPredicted RBP12.43□□□□□ -0.42
PDGFD-202ENST00000393158 DOCK3Q8IZD9 2030 aa12.42□□□□□ -0.42
PDGFD-202ENST00000393158 FIBPO43427 364 aa12.42□□□□□ -0.42
PDGFD-202ENST00000393158 TRAK2O60296 914 aa12.42□□□□□ -0.42
PDGFD-202ENST00000393158 LIG1P18858 919 aa12.42□□□□□ -0.42
PDGFD-202ENST00000393158 SLC39A14Q15043 492 aa12.42□□□□□ -0.42
PDGFD-202ENST00000393158 PNMA8AQ86V59 439 aaPredicted RBP12.42□□□□□ -0.42
PDGFD-202ENST00000393158 HOMER1Q86YM7 354 aa12.42□□□□□ -0.42
PDGFD-202ENST00000393158 WASF1Q92558 559 aa12.42□□□□□ -0.42
PDGFD-202ENST00000393158 VAT1LQ9HCJ6 419 aa12.42□□□□□ -0.42
PDGFD-202ENST00000393158 CABP5Q9NP86 173 aa12.42□□□□□ -0.42
PDGFD-202ENST00000393158 RIC8AQ9NPQ8 531 aa12.42□□□□□ -0.42
PDGFD-202ENST00000393158 THSD7BQ9C0I4 1608 aa12.42□□□□□ -0.42
PDGFD-202ENST00000393158 IQCA1LA6NCM1 817 aa12.42□□□□□ -0.42
PDGFD-202ENST00000393158 SPDYE5A6NIY4 337 aa12.42□□□□□ -0.42
PDGFD-202ENST00000393158 H3BQV1 296 aa12.42□□□□□ -0.42
PDGFD-202ENST00000393158 STAT2P52630 851 aa12.42□□□□□ -0.42
PDGFD-202ENST00000393158 IFFO2Q5TF58 517 aa12.42□□□□□ -0.42
PDGFD-202ENST00000393158 DCAF15Q66K64 600 aa12.42□□□□□ -0.42
PDGFD-202ENST00000393158 SHC4Q6S5L8 630 aa12.42□□□□□ -0.42
PDGFD-202ENST00000393158 BLIDQ8IZY5 108 aa12.42□□□□□ -0.42
PDGFD-202ENST00000393158 ARHGEF10LQ9HCE6 1279 aa12.42□□□□□ -0.42
PDGFD-202ENST00000393158 ZNF214Q9UL59 606 aaPredicted RBP12.42□□□□□ -0.42
PDGFD-202ENST00000393158 HPSEQ9Y251 543 aa12.42□□□□□ -0.42
PDGFD-202ENST00000393158 ZHX2Q9Y6X8 837 aa12.42□□□□□ -0.42
PDGFD-202ENST00000393158 ASTN1O14525 1302 aa12.42□□□□□ -0.42
PDGFD-202ENST00000393158 ARID2Q68CP9 1835 aa12.42□□□□□ -0.42
PDGFD-202ENST00000393158 ZNF236Q9UL36 1845 aa12.42□□□□□ -0.42
PDGFD-202ENST00000393158 CNMDO75829 334 aa12.42□□□□□ -0.42
PDGFD-202ENST00000393158 PRKG1Q13976 671 aa12.42□□□□□ -0.42
PDGFD-202ENST00000393158 SF3A1Q15459 793 aaKnown RBP12.42□□□□□ -0.42
PDGFD-202ENST00000393158 HEATR3Q7Z4Q2 680 aa12.42□□□□□ -0.42
PDGFD-202ENST00000393158 LPAR1Q92633 364 aa12.42□□□□□ -0.42
PDGFD-202ENST00000393158 LENG9Q96B70 501 aa12.42□□□□□ -0.42
PDGFD-202ENST00000393158 GBP4Q96PP9 640 aa12.42□□□□□ -0.42
PDGFD-202ENST00000393158 COL20A1Q9P218 1284 aa12.42□□□□□ -0.42
PDGFD-202ENST00000393158 RBM27Q9P2N5 1060 aaKnown RBP12.42□□□□□ -0.42
PDGFD-202ENST00000393158 RIPK3Q9Y572 518 aa12.42□□□□□ -0.42
PDGFD-202ENST00000393158 A0A087X0B3 334 aa12.41□□□□□ -0.42
PDGFD-202ENST00000393158 WDR46O15213 610 aaKnown RBP12.41□□□□□ -0.42
PDGFD-202ENST00000393158 KRT2P35908 639 aa12.41□□□□□ -0.42
PDGFD-202ENST00000393158 MAP3K9P80192 1104 aa12.41□□□□□ -0.42
PDGFD-202ENST00000393158 PPP4R3BQ5MIZ7 849 aa12.41□□□□□ -0.42
PDGFD-202ENST00000393158 ANO1Q5XXA6 986 aa12.41□□□□□ -0.42
PDGFD-202ENST00000393158 RRP36Q96EU6 259 aaKnown RBP12.41□□□□□ -0.42
PDGFD-202ENST00000393158 GOPCQ9HD26 462 aa12.41□□□□□ -0.42
PDGFD-202ENST00000393158 FRMPD4Q14CM0 1322 aa12.41□□□□□ -0.42
PDGFD-202ENST00000393158 DDX11L8A8MPP1 907 aa12.41□□□□□ -0.42
PDGFD-202ENST00000393158 SULF1Q8IWU6 871 aa12.41□□□□□ -0.42
PDGFD-202ENST00000393158 PIK3CDO00329 1044 aa12.41□□□□□ -0.42
PDGFD-202ENST00000393158 HMGCS2P54868 508 aa12.41□□□□□ -0.42
PDGFD-202ENST00000393158 SUPT20HL1Q3ZLR7 823 aa12.41□□□□□ -0.42
PDGFD-202ENST00000393158 ATL3Q6DD88 541 aa12.41□□□□□ -0.42
PDGFD-202ENST00000393158 CPLX2Q6PUV4 134 aaKnown RBP12.41□□□□□ -0.42
PDGFD-202ENST00000393158 FUCA2Q9BTY2 467 aa12.41□□□□□ -0.42
PDGFD-202ENST00000393158 TMEM60Q9H2L4 133 aa12.41□□□□□ -0.42
PDGFD-202ENST00000393158 TRIM75PA6NK02 468 aa12.4□□□□□ -0.42
PDGFD-202ENST00000393158 hCG_1984214I3L0E3 225 aa12.4□□□□□ -0.42
PDGFD-202ENST00000393158 KIF3CO14782 793 aa12.4□□□□□ -0.42
PDGFD-202ENST00000393158 PPP1R18Q6NYC8 613 aa12.4□□□□□ -0.42
PDGFD-202ENST00000393158 CATSPERGQ6ZRH7 1159 aa12.4□□□□□ -0.42
PDGFD-202ENST00000393158 RBM43Q6ZSC3 357 aaKnown RBP12.4□□□□□ -0.42
PDGFD-202ENST00000393158 USP49Q70CQ1 688 aa12.4□□□□□ -0.42
PDGFD-202ENST00000393158 ZNF713Q8N859 430 aaPredicted RBP12.4□□□□□ -0.42
PDGFD-202ENST00000393158 MBOAT7Q96N66 472 aa12.4□□□□□ -0.42
PDGFD-202ENST00000393158 TRIM34Q9BYJ4 488 aa12.4□□□□□ -0.42
PDGFD-202ENST00000393158 PPP1R9AQ9ULJ8 1098 aa12.4□□□□□ -0.42
PDGFD-202ENST00000393158 SMCO2A6NFE2 343 aa12.4□□□□□ -0.42
PDGFD-202ENST00000393158 YEATS4O95619 227 aa12.4□□□□□ -0.42
PDGFD-202ENST00000393158 UBE2SQ16763 222 aa12.4□□□□□ -0.42
PDGFD-202ENST00000393158 GAS2L3Q86XJ1 694 aa12.4□□□□□ -0.42
PDGFD-202ENST00000393158 AGBL1Q96MI9 1066 aa12.4□□□□□ -0.42
PDGFD-202ENST00000393158 RPAP3Q9H6T3 665 aaPredicted RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms