RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 PDE8BO95263 885 aa14.42□□□□□ -0.1
LCA5-202ENST00000392959 CCT5P48643 541 aa14.42□□□□□ -0.1
LCA5-202ENST00000392959 MFSD14BQ5SR56 506 aa14.42□□□□□ -0.1
LCA5-202ENST00000392959 MCTP2Q6DN12 878 aa14.42□□□□□ -0.1
LCA5-202ENST00000392959 CNOT6LQ96LI5 555 aaKnown RBP14.42□□□□□ -0.1
LCA5-202ENST00000392959 RILPQ96NA2 401 aa14.42□□□□□ -0.1
LCA5-202ENST00000392959 PICK1Q9NRD5 415 aa14.42□□□□□ -0.1
LCA5-202ENST00000392959 ATP7AQ04656 1500 aa14.42□□□□□ -0.1
LCA5-202ENST00000392959 CCDC151A5D8V7 595 aa14.41□□□□□ -0.1
LCA5-202ENST00000392959 EEF1GP26641 437 aaKnown RBP14.41□□□□□ -0.1
LCA5-202ENST00000392959 ADCY8P40145 1251 aa14.41□□□□□ -0.1
LCA5-202ENST00000392959 TRAPPC10P48553 1259 aa14.41□□□□□ -0.1
LCA5-202ENST00000392959 PRR16Q569H4 304 aa14.41□□□□□ -0.1
LCA5-202ENST00000392959 AFAP1L2Q8N4X5 818 aa14.41□□□□□ -0.1
LCA5-202ENST00000392959 FTOQ9C0B1 505 aaKnown RBP eCLIP14.41□□□□□ -0.1
LCA5-202ENST00000392959 MAGEF1Q9HAY2 307 aa14.41□□□□□ -0.1
LCA5-202ENST00000392959 TXNDC9O14530 226 aa14.41□□□□□ -0.1
LCA5-202ENST00000392959 PCP11498 1178 aaKnown RBP14.41□□□□□ -0.1
LCA5-202ENST00000392959 KIF23Q02241 960 aaPredicted RBP14.41□□□□□ -0.1
LCA5-202ENST00000392959 GOLGA8FQ08AF8 430 aa14.41□□□□□ -0.1
LCA5-202ENST00000392959 GOLGA8DPQ0D2H9 430 aa14.41□□□□□ -0.1
LCA5-202ENST00000392959 SIRT2Q8IXJ6 389 aa14.41□□□□□ -0.1
LCA5-202ENST00000392959 FNBP4Q8N3X1 1017 aaPredicted RBP14.41□□□□□ -0.1
LCA5-202ENST00000392959 GOLGA8HP0CJ92 632 aa14.41□□□□□ -0.1
LCA5-202ENST00000392959 PHKA1P46020 1223 aa14.41□□□□□ -0.1
LCA5-202ENST00000392959 FAM178BQ8IXR5 827 aa14.41□□□□□ -0.1
LCA5-202ENST00000392959 ATP2A3Q93084 1043 aa14.41□□□□□ -0.1
LCA5-202ENST00000392959 NUF2Q9BZD4 464 aa14.41□□□□□ -0.1
LCA5-202ENST00000392959 LARSQ9P2J5 1176 aaKnown RBP14.41□□□□□ -0.1
LCA5-202ENST00000392959 COL4A3BPQ9Y5P4 624 aa14.41□□□□□ -0.1
LCA5-202ENST00000392959 GIPC1O14908 333 aa14.41□□□□□ -0.1
LCA5-202ENST00000392959 KRT19P08727 400 aa14.41□□□□□ -0.1
LCA5-202ENST00000392959 ADAT2Q7Z6V5 191 aaKnown RBP14.41□□□□□ -0.1
LCA5-202ENST00000392959 UHMK1Q8TAS1 419 aaKnown RBP14.41□□□□□ -0.1
LCA5-202ENST00000392959 TMOD4Q9NZQ9 345 aa14.41□□□□□ -0.1
LCA5-202ENST00000392959 CASQ2O14958 399 aaPredicted RBP14.4□□□□□ -0.1
LCA5-202ENST00000392959 PROSER3Q2NL68 480 aa14.4□□□□□ -0.1
LCA5-202ENST00000392959 KCTD16Q68DU8 428 aa14.4□□□□□ -0.1
LCA5-202ENST00000392959 GRK7Q8WTQ7 553 aa14.4□□□□□ -0.1
LCA5-202ENST00000392959 ZBED4O75132 1171 aa14.4□□□□□ -0.1
LCA5-202ENST00000392959 CA8P35219 290 aa14.4□□□□□ -0.1
LCA5-202ENST00000392959 RASSF7Q02833 373 aa14.4□□□□□ -0.1
LCA5-202ENST00000392959 DMTNQ08495 405 aa14.4□□□□□ -0.1
LCA5-202ENST00000392959 PALM2Q8IXS6 379 aa14.4□□□□□ -0.1
LCA5-202ENST00000392959 CHURC1Q8WUH1 139 aa14.4□□□□□ -0.1
LCA5-202ENST00000392959 PUS3Q9BZE2 481 aaKnown RBP14.4□□□□□ -0.1
LCA5-202ENST00000392959 CUEDC2Q9H467 287 aa14.4□□□□□ -0.1
LCA5-202ENST00000392959 AZI2Q9H6S1 392 aa14.4□□□□□ -0.1
LCA5-202ENST00000392959 KDM5AP29375 1690 aaKnown RBP14.4□□□□□ -0.1
LCA5-202ENST00000392959 EIF4G3O43432 1585 aaKnown RBP14.4□□□□□ -0.1
LCA5-202ENST00000392959 N4BP1O75113 896 aaKnown RBP14.4□□□□□ -0.1
LCA5-202ENST00000392959 RBL2Q08999 1139 aa14.4□□□□□ -0.1
LCA5-202ENST00000392959 MIER3Q7Z3K6 550 aa14.4□□□□□ -0.1
LCA5-202ENST00000392959 RETREG2Q8NC44 543 aa14.4□□□□□ -0.1
LCA5-202ENST00000392959 USP40Q9NVE5 1235 aa14.4□□□□□ -0.1
LCA5-202ENST00000392959 AATKQ6ZMQ8 1374 aa14.4□□□□□ -0.1
LCA5-202ENST00000392959 SLFN14P0C7P3 912 aa14.4□□□□□ -0.1
LCA5-202ENST00000392959 ADORA1P30542 326 aa14.4□□□□□ -0.1
LCA5-202ENST00000392959 TAF12Q16514 161 aa14.4□□□□□ -0.1
LCA5-202ENST00000392959 NLRX1Q86UT6 975 aa14.4□□□□□ -0.1
LCA5-202ENST00000392959 SLFN12Q8IYM2 578 aa14.4□□□□□ -0.1
LCA5-202ENST00000392959 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.4□□□□□ -0.1
LCA5-202ENST00000392959 PFDN4Q9NQP4 134 aa14.4□□□□□ -0.1
LCA5-202ENST00000392959 TACC3Q9Y6A5 838 aa14.4□□□□□ -0.1
LCA5-202ENST00000392959 EXOC3L4Q17RC7 722 aa14.39□□□□□ -0.11
LCA5-202ENST00000392959 PHLDB3Q6NSJ2 640 aa14.39□□□□□ -0.11
LCA5-202ENST00000392959 CCDC13Q8IYE1 715 aa14.39□□□□□ -0.11
LCA5-202ENST00000392959 ENOX1Q8TC92 643 aaKnown RBP14.39□□□□□ -0.11
LCA5-202ENST00000392959 KRT12Q99456 494 aa14.39□□□□□ -0.11
LCA5-202ENST00000392959 RIPOR2Q9Y4F9 1068 aa14.39□□□□□ -0.11
LCA5-202ENST00000392959 THAP12O43422 761 aa14.39□□□□□ -0.11
LCA5-202ENST00000392959 HSPA2P54652 639 aa14.39□□□□□ -0.11
LCA5-202ENST00000392959 GTF2IP78347 998 aa14.39□□□□□ -0.11
LCA5-202ENST00000392959 NAA35Q5VZE5 725 aa14.39□□□□□ -0.11
LCA5-202ENST00000392959 RSAD2Q8WXG1 361 aa14.39□□□□□ -0.11
LCA5-202ENST00000392959 DHTKD1Q96HY7 919 aaPredicted RBP14.39□□□□□ -0.11
LCA5-202ENST00000392959 CIAO1O76071 339 aa14.39□□□□□ -0.11
LCA5-202ENST00000392959 SMYD4Q8IYR2 804 aaPredicted RBP14.39□□□□□ -0.11
LCA5-202ENST00000392959 TYW1Q9NV66 732 aaKnown RBP14.39□□□□□ -0.11
LCA5-202ENST00000392959 LARGE1O95461 756 aa14.39□□□□□ -0.11
LCA5-202ENST00000392959 PTPN21Q16825 1174 aa14.39□□□□□ -0.11
LCA5-202ENST00000392959 RAB3IPQ96QF0 476 aaPredicted RBP14.39□□□□□ -0.11
LCA5-202ENST00000392959 RAB20Q9NX57 234 aa14.39□□□□□ -0.11
LCA5-202ENST00000392959 DDX25Q9UHL0 483 aaKnown RBP14.39□□□□□ -0.11
LCA5-202ENST00000392959 CLEC11AQ9Y240 323 aa14.39□□□□□ -0.11
LCA5-202ENST00000392959 BZW2Q9Y6E2 419 aaKnown RBP14.39□□□□□ -0.11
LCA5-202ENST00000392959 COBLO75128 1261 aa14.38□□□□□ -0.11
LCA5-202ENST00000392959 FMNL1O95466 1100 aaPredicted RBP14.38□□□□□ -0.11
LCA5-202ENST00000392959 CLTAP09496 248 aa14.38□□□□□ -0.11
LCA5-202ENST00000392959 ZNF853P0CG23 659 aa14.38□□□□□ -0.11
LCA5-202ENST00000392959 PHBP35232 272 aa14.38□□□□□ -0.11
LCA5-202ENST00000392959 EPHB4P54760 987 aa14.38□□□□□ -0.11
LCA5-202ENST00000392959 SARNPP82979 210 aaKnown RBP14.38□□□□□ -0.11
LCA5-202ENST00000392959 OTUD6AQ7L8S5 288 aa14.38□□□□□ -0.11
LCA5-202ENST00000392959 PPM1KQ8N3J5 372 aa14.38□□□□□ -0.11
LCA5-202ENST00000392959 GJA10Q969M2 543 aa14.38□□□□□ -0.11
LCA5-202ENST00000392959 GREM2Q9H772 168 aa14.38□□□□□ -0.11
LCA5-202ENST00000392959 ST7Q9NRC1 585 aa14.38□□□□□ -0.11
LCA5-202ENST00000392959 SPTLC3Q9NUV7 552 aa14.38□□□□□ -0.11
LCA5-202ENST00000392959 FRMPD2Q68DX3 1309 aaPredicted RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms