RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 CCDC112Q8NEF3 446 aa28.95■■■□□ 2.23
SMARCD3-203ENST00000392811 CCSER1Q9C0I3 900 aa28.95■■■□□ 2.23
SMARCD3-203ENST00000392811 TMX1Q9H3N1 280 aa28.95■■■□□ 2.23
SMARCD3-203ENST00000392811 UBA7P41226 1012 aa28.94■■■□□ 2.22
SMARCD3-203ENST00000392811 NEK8Q86SG6 692 aa28.94■■■□□ 2.22
SMARCD3-203ENST00000392811 REXO1Q8N1G1 1221 aaKnown RBP28.94■■■□□ 2.22
SMARCD3-203ENST00000392811 BIN2Q9UBW5 565 aaPredicted RBP28.94■■■□□ 2.22
SMARCD3-203ENST00000392811 CTNND2Q9UQB3 1225 aa28.94■■■□□ 2.22
SMARCD3-203ENST00000392811 PCDHAC2Q9Y5I4 1007 aa28.94■■■□□ 2.22
SMARCD3-203ENST00000392811 SLX4Q8IY92 1834 aa28.94■■■□□ 2.22
SMARCD3-203ENST00000392811 PSDA5PKW4 1024 aaPredicted RBP28.94■■■□□ 2.22
SMARCD3-203ENST00000392811 RPN1P04843 607 aaKnown RBP28.94■■■□□ 2.22
SMARCD3-203ENST00000392811 OR52Z1P0C646 297 aa28.94■■■□□ 2.22
SMARCD3-203ENST00000392811 NR1I3Q14994 352 aa28.94■■■□□ 2.22
SMARCD3-203ENST00000392811 CDKAL1Q5VV42 579 aa28.94■■■□□ 2.22
SMARCD3-203ENST00000392811 RRAGBQ5VZM2 374 aa28.94■■■□□ 2.22
SMARCD3-203ENST00000392811 SPECC1LQ69YQ0 1117 aa28.94■■■□□ 2.22
SMARCD3-203ENST00000392811 APTXQ7Z2E3 356 aaKnown RBP28.94■■■□□ 2.22
SMARCD3-203ENST00000392811 RASSF8Q8NHQ8 419 aa28.94■■■□□ 2.22
SMARCD3-203ENST00000392811 ZNF592Q92610 1267 aa28.94■■■□□ 2.22
SMARCD3-203ENST00000392811 GREB1LQ9C091 1923 aaPredicted RBP28.93■■■□□ 2.22
SMARCD3-203ENST00000392811 A0A1B0GTH6 734 aa28.93■■■□□ 2.22
SMARCD3-203ENST00000392811 SLURP2P0DP57 97 aa28.93■■■□□ 2.22
SMARCD3-203ENST00000392811 ZNF543Q08ER8 600 aa28.93■■■□□ 2.22
SMARCD3-203ENST00000392811 JAKMIP3Q5VZ66 844 aa28.93■■■□□ 2.22
SMARCD3-203ENST00000392811 AEBP2Q6ZN18 517 aaPredicted RBP28.93■■■□□ 2.22
SMARCD3-203ENST00000392811 TBCKQ8TEA7 893 aa28.93■■■□□ 2.22
SMARCD3-203ENST00000392811 COA7Q96BR5 231 aa28.93■■■□□ 2.22
SMARCD3-203ENST00000392811 PPP1R13BQ96KQ4 1090 aa28.93■■■□□ 2.22
SMARCD3-203ENST00000392811 RMND1Q9NWS8 449 aa28.93■■■□□ 2.22
SMARCD3-203ENST00000392811 TMEM260Q9NX78 707 aa28.93■■■□□ 2.22
SMARCD3-203ENST00000392811 ZNF219Q9P2Y4 722 aaPredicted RBP28.93■■■□□ 2.22
SMARCD3-203ENST00000392811 TNS1Q9HBL0 1735 aaKnown RBP28.93■■■□□ 2.22
SMARCD3-203ENST00000392811 MPHOSPH10O00566 681 aaKnown RBP28.93■■■□□ 2.22
SMARCD3-203ENST00000392811 DACT2Q5SW24 774 aa28.93■■■□□ 2.22
SMARCD3-203ENST00000392811 STRIP1Q5VSL9 837 aa28.93■■■□□ 2.22
SMARCD3-203ENST00000392811 EHD4Q9H223 541 aa28.93■■■□□ 2.22
SMARCD3-203ENST00000392811 SCN9AQ15858 1988 aa28.92■■■□□ 2.22
SMARCD3-203ENST00000392811 RRP9O43818 475 aaKnown RBP28.92■■■□□ 2.22
SMARCD3-203ENST00000392811 ECE2O60344 883 aa28.92■■■□□ 2.22
SMARCD3-203ENST00000392811 ZNF658Q5TYW1 1059 aaPredicted RBP28.92■■■□□ 2.22
SMARCD3-203ENST00000392811 CACNB3P54284 484 aa28.91■■■□□ 2.22
SMARCD3-203ENST00000392811 FKBP1AP62942 108 aaKnown RBP28.91■■■□□ 2.22
SMARCD3-203ENST00000392811 MRIQ9BWK5 157 aa28.91■■■□□ 2.22
SMARCD3-203ENST00000392811 CHRNA5P30532 468 aa28.91■■■□□ 2.22
SMARCD3-203ENST00000392811 PLIN2Q99541 437 aa28.91■■■□□ 2.22
SMARCD3-203ENST00000392811 DNAJC18Q9H819 358 aa28.91■■■□□ 2.22
SMARCD3-203ENST00000392811 JMJD4Q9H9V9 463 aa28.91■■■□□ 2.22
SMARCD3-203ENST00000392811 ZNF646O15015 1829 aaPredicted RBP28.9■■■□□ 2.22
SMARCD3-203ENST00000392811 ADCY7P51828 1080 aa28.9■■■□□ 2.22
SMARCD3-203ENST00000392811 HSP90AA2PQ14568 343 aaPredicted RBP28.9■■■□□ 2.22
SMARCD3-203ENST00000392811 AK8Q96MA6 479 aa28.9■■■□□ 2.22
SMARCD3-203ENST00000392811 ATP2B2Q01814 1243 aa28.89■■■□□ 2.22
SMARCD3-203ENST00000392811 TCP10Q12799 353 aa28.89■■■□□ 2.22
SMARCD3-203ENST00000392811 TTBK2Q6IQ55 1244 aa28.89■■■□□ 2.22
SMARCD3-203ENST00000392811 TMEM139Q8IV31 216 aa28.89■■■□□ 2.22
SMARCD3-203ENST00000392811 ADGRF4Q8IZF3 695 aa28.89■■■□□ 2.22
SMARCD3-203ENST00000392811 RWDD2AQ9UIY3 292 aa28.89■■■□□ 2.22
SMARCD3-203ENST00000392811 MYH4Q9Y623 1939 aa28.89■■■□□ 2.22
SMARCD3-203ENST00000392811 SIPA1L1O43166 1804 aa28.89■■■□□ 2.22
SMARCD3-203ENST00000392811 CTIFO43310 598 aaKnown RBP28.89■■■□□ 2.21
SMARCD3-203ENST00000392811 COBLO75128 1261 aa28.89■■■□□ 2.21
SMARCD3-203ENST00000392811 RBM5P52756 815 aaKnown RBP eCLIP28.89■■■□□ 2.21
SMARCD3-203ENST00000392811 LRRC15Q8TF66 581 aa28.89■■■□□ 2.21
SMARCD3-203ENST00000392811 CCDC17Q96LX7 622 aa28.89■■■□□ 2.21
SMARCD3-203ENST00000392811 TEX33O43247 280 aa28.88■■■□□ 2.21
SMARCD3-203ENST00000392811 HDLBPQ00341 1268 aaKnown RBP28.88■■■□□ 2.21
SMARCD3-203ENST00000392811 PAK1Q13153 545 aa28.88■■■□□ 2.21
SMARCD3-203ENST00000392811 CABP7Q86V35 215 aa28.88■■■□□ 2.21
SMARCD3-203ENST00000392811 KBTBD4Q9NVX7 518 aa28.88■■■□□ 2.21
SMARCD3-203ENST00000392811 ADD3Q9UEY8 706 aaKnown RBP28.88■■■□□ 2.21
SMARCD3-203ENST00000392811 GDAQ9Y2T3 454 aa28.88■■■□□ 2.21
SMARCD3-203ENST00000392811 PNMA6FA0A0J9YX94 578 aa28.87■■■□□ 2.21
SMARCD3-203ENST00000392811 KIF2AO00139 706 aaPredicted RBP28.87■■■□□ 2.21
SMARCD3-203ENST00000392811 RXRBP28702 533 aa28.87■■■□□ 2.21
SMARCD3-203ENST00000392811 ORC2Q13416 577 aaPredicted RBP28.87■■■□□ 2.21
SMARCD3-203ENST00000392811 TC2NQ8N9U0 490 aa28.87■■■□□ 2.21
SMARCD3-203ENST00000392811 FAM198AQ9UFP1 575 aa28.87■■■□□ 2.21
SMARCD3-203ENST00000392811 CCDC96Q2M329 555 aa28.87■■■□□ 2.21
SMARCD3-203ENST00000392811 NELFBQ8WX92 580 aa28.87■■■□□ 2.21
SMARCD3-203ENST00000392811 DHX36Q9H2U1 1008 aaKnown RBP28.87■■■□□ 2.21
SMARCD3-203ENST00000392811 DDTLA6NHG4 134 aaPredicted RBP28.86■■■□□ 2.21
SMARCD3-203ENST00000392811 FAM196BA6NMK8 535 aa28.86■■■□□ 2.21
SMARCD3-203ENST00000392811 PPP1R11O60927 126 aaPredicted RBP28.86■■■□□ 2.21
SMARCD3-203ENST00000392811 GPATCH4Q5T3I0 446 aaKnown RBP28.86■■■□□ 2.21
SMARCD3-203ENST00000392811 POTEDQ86YR6 584 aa28.86■■■□□ 2.21
SMARCD3-203ENST00000392811 ZNF710Q8N1W2 664 aa28.86■■■□□ 2.21
SMARCD3-203ENST00000392811 CTAGE1Q96RT6 745 aa28.86■■■□□ 2.21
SMARCD3-203ENST00000392811 IDI2Q9BXS1 227 aa28.86■■■□□ 2.21
SMARCD3-203ENST00000392811 RGPD3A6NKT7 1758 aaPredicted RBP28.86■■■□□ 2.21
SMARCD3-203ENST00000392811 RGPD4Q7Z3J3 1758 aa28.86■■■□□ 2.21
SMARCD3-203ENST00000392811 MYL1P05976 194 aa28.86■■■□□ 2.21
SMARCD3-203ENST00000392811 PLCG1P19174 1290 aa28.86■■■□□ 2.21
SMARCD3-203ENST00000392811 SLC16A2P36021 539 aa28.86■■■□□ 2.21
SMARCD3-203ENST00000392811 PRCPP42785 496 aa28.86■■■□□ 2.21
SMARCD3-203ENST00000392811 ADKP55263 362 aaKnown RBP28.86■■■□□ 2.21
SMARCD3-203ENST00000392811 PPP1R18Q6NYC8 613 aa28.86■■■□□ 2.21
SMARCD3-203ENST00000392811 CNKSR1Q969H4 720 aa28.86■■■□□ 2.21
SMARCD3-203ENST00000392811 KLRC4O43908 158 aa28.85■■■□□ 2.21
SMARCD3-203ENST00000392811 TECP42680 631 aa28.85■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms