RNA–Protein interactions for RNA: ENST00000389805.8

SQSTM1-202, Transcript of sequestosome 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQSTM1, Length 2,986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-202ENST00000389805 TTC19Q6DKK2 380 aaPredicted RBP19.86■□□□□ 0.77
SQSTM1-202ENST00000389805 ATP8A2Q9NTI2 1148 aa19.86■□□□□ 0.77
SQSTM1-202ENST00000389805 MYO6Q9UM54 1294 aa19.86■□□□□ 0.77
SQSTM1-202ENST00000389805 GUCA1BQ9UMX6 200 aa19.86■□□□□ 0.77
SQSTM1-202ENST00000389805 ORC4O43929 436 aa19.86■□□□□ 0.77
SQSTM1-202ENST00000389805 MFAP3LO75121 409 aa19.86■□□□□ 0.77
SQSTM1-202ENST00000389805 RFC4P35249 363 aa19.86■□□□□ 0.77
SQSTM1-202ENST00000389805 MORC3Q14149 939 aa19.86■□□□□ 0.77
SQSTM1-202ENST00000389805 PIK3AP1Q6ZUJ8 805 aa19.86■□□□□ 0.77
SQSTM1-202ENST00000389805 SLC44A5Q8NCS7 719 aa19.86■□□□□ 0.77
SQSTM1-202ENST00000389805 SH3RF3Q8TEJ3 882 aaPredicted RBP19.86■□□□□ 0.77
SQSTM1-202ENST00000389805 SCN7AQ01118 1682 aa19.85■□□□□ 0.77
SQSTM1-202ENST00000389805 A0A087WUV0 522 aaPredicted RBP19.85■□□□□ 0.77
SQSTM1-202ENST00000389805 ERLIN2O94905 339 aa19.85■□□□□ 0.77
SQSTM1-202ENST00000389805 PRPF6O94906 941 aaKnown RBP19.85■□□□□ 0.77
SQSTM1-202ENST00000389805 GGCXP38435 758 aa19.85■□□□□ 0.77
SQSTM1-202ENST00000389805 TFAP4Q01664 338 aa19.85■□□□□ 0.77
SQSTM1-202ENST00000389805 CCDC148Q8NFR7 591 aa19.85■□□□□ 0.77
SQSTM1-202ENST00000389805 TNFRSF25Q93038 417 aa19.85■□□□□ 0.77
SQSTM1-202ENST00000389805 MNAT1P51948 309 aa19.85■□□□□ 0.77
SQSTM1-202ENST00000389805 ERVK-24P63145 666 aa19.85■□□□□ 0.77
SQSTM1-202ENST00000389805 PTGDRQ13258 359 aa19.85■□□□□ 0.77
SQSTM1-202ENST00000389805 MCTP2Q6DN12 878 aa19.85■□□□□ 0.77
SQSTM1-202ENST00000389805 STAG2Q8N3U4 1231 aa19.85■□□□□ 0.77
SQSTM1-202ENST00000389805 IL17RBQ9NRM6 502 aa19.85■□□□□ 0.77
SQSTM1-202ENST00000389805 USP17L3A6NCW0 530 aa19.84■□□□□ 0.77
SQSTM1-202ENST00000389805 USP17L4A6NCW7 530 aa19.84■□□□□ 0.77
SQSTM1-202ENST00000389805 RNF225M0QZC1 329 aaPredicted RBP19.84■□□□□ 0.77
SQSTM1-202ENST00000389805 DDAH1O94760 285 aa19.84■□□□□ 0.77
SQSTM1-202ENST00000389805 GYPCP04921 128 aa19.84■□□□□ 0.77
SQSTM1-202ENST00000389805 CALM1P0DP23 149 aa19.84■□□□□ 0.77
SQSTM1-202ENST00000389805 CALM2P0DP24 149 aa19.84■□□□□ 0.77
SQSTM1-202ENST00000389805 CALM3P0DP25 149 aa19.84■□□□□ 0.77
SQSTM1-202ENST00000389805 NLRP5P59047 1200 aa19.84■□□□□ 0.77
SQSTM1-202ENST00000389805 WHAMMP3Q1A5X7 153 aa19.84■□□□□ 0.77
SQSTM1-202ENST00000389805 FAM196AQ6ZSG2 479 aa19.84■□□□□ 0.77
SQSTM1-202ENST00000389805 USP17L1Q7RTZ2 530 aa19.84■□□□□ 0.77
SQSTM1-202ENST00000389805 GPKOWQ92917 476 aaPredicted RBP eCLIP19.84■□□□□ 0.77
SQSTM1-202ENST00000389805 DACH1Q9UI36 760 aa19.84■□□□□ 0.77
SQSTM1-202ENST00000389805 USP21Q9UK80 565 aa19.84■□□□□ 0.77
SQSTM1-202ENST00000389805 HPCAL4Q9UM19 191 aa19.84■□□□□ 0.77
SQSTM1-202ENST00000389805 IRS2Q9Y4H2 1338 aa19.84■□□□□ 0.77
SQSTM1-202ENST00000389805 NT5DC1Q5TFE4 455 aa19.84■□□□□ 0.77
SQSTM1-202ENST00000389805 APTXQ7Z2E3 356 aaKnown RBP19.84■□□□□ 0.77
SQSTM1-202ENST00000389805 MSL3Q8N5Y2 521 aaKnown RBP19.84■□□□□ 0.77
SQSTM1-202ENST00000389805 KAT14Q9H8E8 782 aa19.84■□□□□ 0.77
SQSTM1-202ENST00000389805 TTC38Q5R3I4 469 aa19.83■□□□□ 0.77
SQSTM1-202ENST00000389805 ARPP21Q9UBL0 812 aaPredicted RBP19.83■□□□□ 0.77
SQSTM1-202ENST00000389805 CD44P16070 742 aaKnown RBP19.83■□□□□ 0.77
SQSTM1-202ENST00000389805 MCM7P33993 719 aa19.83■□□□□ 0.77
SQSTM1-202ENST00000389805 RASGRP4Q8TDF6 673 aa19.83■□□□□ 0.77
SQSTM1-202ENST00000389805 UBAP1LF5GYI3 381 aa19.83■□□□□ 0.76
SQSTM1-202ENST00000389805 LDHBP07195 334 aaKnown RBP19.83■□□□□ 0.76
SQSTM1-202ENST00000389805 PCP11498 1178 aaKnown RBP19.83■□□□□ 0.76
SQSTM1-202ENST00000389805 SCG2P13521 617 aa19.83■□□□□ 0.76
SQSTM1-202ENST00000389805 ARHGAP25P42331 645 aa19.83■□□□□ 0.76
SQSTM1-202ENST00000389805 PLCD1P51178 756 aa19.83■□□□□ 0.76
SQSTM1-202ENST00000389805 STIM1Q13586 685 aa19.83■□□□□ 0.76
SQSTM1-202ENST00000389805 TGFBRAP1Q8WUH2 860 aa19.83■□□□□ 0.76
SQSTM1-202ENST00000389805 NAA15Q9BXJ9 866 aaKnown RBP19.83■□□□□ 0.76
SQSTM1-202ENST00000389805 SAP30BPQ9UHR5 308 aaKnown RBP19.83■□□□□ 0.76
SQSTM1-202ENST00000389805 TTF2Q9UNY4 1162 aaKnown RBP19.83■□□□□ 0.76
SQSTM1-202ENST00000389805 TRAPPC3LQ5T215 181 aa19.82■□□□□ 0.76
SQSTM1-202ENST00000389805 PAGE5Q96GU1 130 aa19.82■□□□□ 0.76
SQSTM1-202ENST00000389805 MMS19Q96T76 1030 aa19.82■□□□□ 0.76
SQSTM1-202ENST00000389805 ADD3Q9UEY8 706 aaKnown RBP19.82■□□□□ 0.76
SQSTM1-202ENST00000389805 FAM169AQ9Y6X4 670 aa19.82■□□□□ 0.76
SQSTM1-202ENST00000389805 MYBL2P10244 700 aa19.81■□□□□ 0.76
SQSTM1-202ENST00000389805 IL17AQ16552 155 aa19.81■□□□□ 0.76
SQSTM1-202ENST00000389805 SBK1Q52WX2 424 aa19.81■□□□□ 0.76
SQSTM1-202ENST00000389805 C12orf60Q5U649 245 aa19.81■□□□□ 0.76
SQSTM1-202ENST00000389805 SUGP1Q8IWZ8 645 aaKnown RBP19.81■□□□□ 0.76
SQSTM1-202ENST00000389805 ELOA2Q8IYF1 753 aaPredicted RBP19.81■□□□□ 0.76
SQSTM1-202ENST00000389805 NUP88Q99567 741 aaPredicted RBP19.81■□□□□ 0.76
SQSTM1-202ENST00000389805 SAMM50Q9Y512 469 aa19.81■□□□□ 0.76
SQSTM1-202ENST00000389805 CPP00450 1065 aa19.81■□□□□ 0.76
SQSTM1-202ENST00000389805 CRACR2AQ9BSW2 395 aa19.81■□□□□ 0.76
SQSTM1-202ENST00000389805 VPS16Q9H269 839 aa19.81■□□□□ 0.76
SQSTM1-202ENST00000389805 LRRC4BQ9NT99 713 aa19.81■□□□□ 0.76
SQSTM1-202ENST00000389805 WDR93Q6P2C0 686 aa19.8■□□□□ 0.76
SQSTM1-202ENST00000389805 MAPKAPK5Q8IW41 473 aa19.8■□□□□ 0.76
SQSTM1-202ENST00000389805 SPATA20Q8TB22 786 aa19.8■□□□□ 0.76
SQSTM1-202ENST00000389805 BLZF1Q9H2G9 400 aa19.8■□□□□ 0.76
SQSTM1-202ENST00000389805 CPVLQ9H3G5 476 aa19.8■□□□□ 0.76
SQSTM1-202ENST00000389805 MKNK2Q9HBH9 465 aa19.8■□□□□ 0.76
SQSTM1-202ENST00000389805 USP14P54578 494 aa19.8■□□□□ 0.76
SQSTM1-202ENST00000389805 AMPD2Q01433 879 aa19.8■□□□□ 0.76
SQSTM1-202ENST00000389805 TUBB2AQ13885 445 aa19.8■□□□□ 0.76
SQSTM1-202ENST00000389805 TYW1BQ6NUM6 668 aa19.8■□□□□ 0.76
SQSTM1-202ENST00000389805 CCDC91Q7Z6B0 441 aa19.8■□□□□ 0.76
SQSTM1-202ENST00000389805 PNMA1Q8ND90 353 aa19.8■□□□□ 0.76
SQSTM1-202ENST00000389805 CHP1Q99653 195 aa19.8■□□□□ 0.76
SQSTM1-202ENST00000389805 TUBB2BQ9BVA1 445 aa19.8■□□□□ 0.76
SQSTM1-202ENST00000389805 SYNRGQ9UMZ2 1314 aa19.8■□□□□ 0.76
SQSTM1-202ENST00000389805 HNRNPH1P31943 449 aaKnown RBP19.8■□□□□ 0.76
SQSTM1-202ENST00000389805 MRPS25P82663 173 aaKnown RBP19.8■□□□□ 0.76
SQSTM1-202ENST00000389805 GRAPQ13588 217 aa19.8■□□□□ 0.76
SQSTM1-202ENST00000389805 PFKFB3Q16875 520 aaPredicted RBP19.8■□□□□ 0.76
SQSTM1-202ENST00000389805 CNBD1Q8NA66 436 aa19.8■□□□□ 0.76
SQSTM1-202ENST00000389805 GRAPLQ8TC17 118 aaPredicted RBP19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms