RNA–Protein interactions for RNA: ENST00000384161.1

RNU6-48P-201, Transcript of RNA, U6 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU6-48P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-48P-201ENST00000384161 PPM1BO75688 479 aa4.29□□□□□ -1.72
RNU6-48P-201ENST00000384161 DDAH1O94760 285 aa4.29□□□□□ -1.72
RNU6-48P-201ENST00000384161 TP53P04637 393 aaPredicted RBP4.29□□□□□ -1.72
RNU6-48P-201ENST00000384161 GAB4Q2WGN9 574 aa4.29□□□□□ -1.72
RNU6-48P-201ENST00000384161 TDRD10Q5VZ19 366 aaKnown RBP4.29□□□□□ -1.72
RNU6-48P-201ENST00000384161 PPFIBP1Q86W92 1011 aa4.29□□□□□ -1.72
RNU6-48P-201ENST00000384161 FAM178BQ8IXR5 827 aa4.29□□□□□ -1.72
RNU6-48P-201ENST00000384161 CRACR2BQ8N4Y2 399 aaPredicted RBP4.29□□□□□ -1.72
RNU6-48P-201ENST00000384161 HNRNPLLQ8WVV9 542 aaKnown RBP4.29□□□□□ -1.72
RNU6-48P-201ENST00000384161 KLHL6Q8WZ60 621 aa4.29□□□□□ -1.72
RNU6-48P-201ENST00000384161 DHX38Q92620 1227 aaKnown RBP4.29□□□□□ -1.72
RNU6-48P-201ENST00000384161 APBA2Q99767 749 aa4.29□□□□□ -1.72
RNU6-48P-201ENST00000384161 HAUS7Q99871 368 aa4.29□□□□□ -1.72
RNU6-48P-201ENST00000384161 EPB41L4BQ9H329 900 aa4.29□□□□□ -1.72
RNU6-48P-201ENST00000384161 CARS2Q9HA77 564 aaKnown RBP4.29□□□□□ -1.72
RNU6-48P-201ENST00000384161 GP6Q9HCN6 339 aa4.29□□□□□ -1.72
RNU6-48P-201ENST00000384161 DCP1AQ9NPI6 582 aaPredicted RBP4.29□□□□□ -1.72
RNU6-48P-201ENST00000384161 CHST7Q9NS84 486 aa4.29□□□□□ -1.72
RNU6-48P-201ENST00000384161 SF3B6Q9Y3B4 125 aaKnown RBP4.29□□□□□ -1.72
RNU6-48P-201ENST00000384161 FHOD1Q9Y613 1164 aa4.29□□□□□ -1.72
RNU6-48P-201ENST00000384161 SSU72P8A0A1W2PR75 194 aa4.28□□□□□ -1.72
RNU6-48P-201ENST00000384161 GSNP06396 782 aa4.28□□□□□ -1.72
RNU6-48P-201ENST00000384161 SYN1P17600 705 aa4.28□□□□□ -1.72
RNU6-48P-201ENST00000384161 BMP7P18075 431 aa4.28□□□□□ -1.72
RNU6-48P-201ENST00000384161 NOP2P46087 812 aaKnown RBP4.28□□□□□ -1.72
RNU6-48P-201ENST00000384161 PCBP3P57721 371 aaKnown RBP4.28□□□□□ -1.72
RNU6-48P-201ENST00000384161 RBM10P98175 930 aaKnown RBP4.28□□□□□ -1.72
RNU6-48P-201ENST00000384161 KRTAP1-1Q07627 177 aa4.28□□□□□ -1.72
RNU6-48P-201ENST00000384161 DDR2Q16832 855 aa4.28□□□□□ -1.72
RNU6-48P-201ENST00000384161 DCAF15Q66K64 600 aa4.28□□□□□ -1.72
RNU6-48P-201ENST00000384161 CWF19L1Q69YN2 538 aaKnown RBP4.28□□□□□ -1.72
RNU6-48P-201ENST00000384161 POMZP3Q6PJE2 187 aa4.28□□□□□ -1.72
RNU6-48P-201ENST00000384161 C6orf15Q6UXA7 325 aaPredicted RBP4.28□□□□□ -1.72
RNU6-48P-201ENST00000384161 RNF111Q6ZNA4 994 aa4.28□□□□□ -1.72
RNU6-48P-201ENST00000384161 EEPD1Q7L9B9 569 aa4.28□□□□□ -1.72
RNU6-48P-201ENST00000384161 LRP10Q7Z4F1 713 aa4.28□□□□□ -1.72
RNU6-48P-201ENST00000384161 ADAT2Q7Z6V5 191 aaKnown RBP4.28□□□□□ -1.72
RNU6-48P-201ENST00000384161 CXorf38Q8TB03 319 aa4.28□□□□□ -1.72
RNU6-48P-201ENST00000384161 MKL1Q969V6 931 aa4.28□□□□□ -1.72
RNU6-48P-201ENST00000384161 ZNF669Q96BR6 464 aaPredicted RBP4.28□□□□□ -1.72
RNU6-48P-201ENST00000384161 RCC1LQ96I51 464 aaKnown RBP4.28□□□□□ -1.72
RNU6-48P-201ENST00000384161 DSCC1Q9BVC3 393 aa4.28□□□□□ -1.72
RNU6-48P-201ENST00000384161 HDAC8Q9BY41 377 aa4.28□□□□□ -1.72
RNU6-48P-201ENST00000384161 KLHL25Q9H0H3 589 aa4.28□□□□□ -1.72
RNU6-48P-201ENST00000384161 IRF2BPLQ9H1B7 796 aa4.28□□□□□ -1.72
RNU6-48P-201ENST00000384161 ATP13A1Q9HD20 1204 aa4.28□□□□□ -1.72
RNU6-48P-201ENST00000384161 RTEL1Q9NZ71 1219 aa4.28□□□□□ -1.72
RNU6-48P-201ENST00000384161 DUSP13Q9UII6 198 aa4.28□□□□□ -1.72
RNU6-48P-201ENST00000384161 PCDHB10Q9UN67 800 aa4.28□□□□□ -1.72
RNU6-48P-201ENST00000384161 IQCA1LA6NCM1 817 aa4.27□□□□□ -1.73
RNU6-48P-201ENST00000384161 AGRPO00253 132 aa4.27□□□□□ -1.73
RNU6-48P-201ENST00000384161 PRAMEF1O95521 474 aa4.27□□□□□ -1.73
RNU6-48P-201ENST00000384161 EPHX1P07099 455 aa4.27□□□□□ -1.73
RNU6-48P-201ENST00000384161 LTKP29376 864 aa4.27□□□□□ -1.73
RNU6-48P-201ENST00000384161 ZNF445P59923 1031 aa4.27□□□□□ -1.73
RNU6-48P-201ENST00000384161 POU4F1Q01851 419 aa4.27□□□□□ -1.73
RNU6-48P-201ENST00000384161 SNW1Q13573 536 aaKnown RBP4.27□□□□□ -1.73
RNU6-48P-201ENST00000384161 TMC3Q7Z5M5 1100 aa4.27□□□□□ -1.73
RNU6-48P-201ENST00000384161 CREG2Q8IUH2 290 aa4.27□□□□□ -1.73
RNU6-48P-201ENST00000384161 MARCH10Q8NA82 808 aaPredicted RBP4.27□□□□□ -1.73
RNU6-48P-201ENST00000384161 LINC00116Q8NCU8 138 aa4.27□□□□□ -1.73
RNU6-48P-201ENST00000384161 KCNN1Q92952 543 aa4.27□□□□□ -1.73
RNU6-48P-201ENST00000384161 TCTN2Q96GX1 697 aa4.27□□□□□ -1.73
RNU6-48P-201ENST00000384161 SLC26A8Q96RN1 970 aa4.27□□□□□ -1.73
RNU6-48P-201ENST00000384161 CCDC113Q9H0I3 377 aa4.27□□□□□ -1.73
RNU6-48P-201ENST00000384161 GFOD1Q9NXC2 390 aa4.27□□□□□ -1.73
RNU6-48P-201ENST00000384161 ZNF451Q9Y4E5 1061 aa4.27□□□□□ -1.73
RNU6-48P-201ENST00000384161 SHISA3A0PJX4 238 aa4.26□□□□□ -1.73
RNU6-48P-201ENST00000384161 NOP56O00567 594 aaKnown RBP4.26□□□□□ -1.73
RNU6-48P-201ENST00000384161 SHOXO15266 292 aa4.26□□□□□ -1.73
RNU6-48P-201ENST00000384161 CBFA2T2O43439 604 aa4.26□□□□□ -1.73
RNU6-48P-201ENST00000384161 GJB6O95452 261 aa4.26□□□□□ -1.73
RNU6-48P-201ENST00000384161 ESR1P03372 595 aa4.26□□□□□ -1.73
RNU6-48P-201ENST00000384161 BMP8BP34820 402 aa4.26□□□□□ -1.73
RNU6-48P-201ENST00000384161 EGR3Q06889 387 aa4.26□□□□□ -1.73
RNU6-48P-201ENST00000384161 GRB10Q13322 594 aa4.26□□□□□ -1.73
RNU6-48P-201ENST00000384161 ARHGEF39Q8N4T4 335 aa4.26□□□□□ -1.73
RNU6-48P-201ENST00000384161 FIBCD1Q8N539 461 aa4.26□□□□□ -1.73
RNU6-48P-201ENST00000384161 USHBP1Q8N6Y0 703 aa4.26□□□□□ -1.73
RNU6-48P-201ENST00000384161 ST13P5Q8NFI4 369 aaPredicted RBP4.26□□□□□ -1.73
RNU6-48P-201ENST00000384161 XYLT2Q9H1B5 865 aa4.26□□□□□ -1.73
RNU6-48P-201ENST00000384161 ZCCHC4Q9H5U6 513 aa4.26□□□□□ -1.73
RNU6-48P-201ENST00000384161 FAM86C1Q9NVL1 165 aa4.26□□□□□ -1.73
RNU6-48P-201ENST00000384161 SUSD2Q9UGT4 822 aa4.26□□□□□ -1.73
RNU6-48P-201ENST00000384161 SUGT1Q9Y2Z0 365 aa4.26□□□□□ -1.73
RNU6-48P-201ENST00000384161 SUSD5O60279 629 aa4.25□□□□□ -1.73
RNU6-48P-201ENST00000384161 TRIM13O60858 407 aa4.25□□□□□ -1.73
RNU6-48P-201ENST00000384161 DUSP4Q13115 394 aa4.25□□□□□ -1.73
RNU6-48P-201ENST00000384161 SERINC3Q13530 473 aa4.25□□□□□ -1.73
RNU6-48P-201ENST00000384161 RASGRF1Q13972 1273 aa4.25□□□□□ -1.73
RNU6-48P-201ENST00000384161 NFIXQ14938 502 aa4.25□□□□□ -1.73
RNU6-48P-201ENST00000384161 NFE2L2Q16236 605 aa4.25□□□□□ -1.73
RNU6-48P-201ENST00000384161 CELF2-AS1Q8N7Q2 184 aa4.25□□□□□ -1.73
RNU6-48P-201ENST00000384161 BVESQ8NE79 360 aa4.25□□□□□ -1.73
RNU6-48P-201ENST00000384161 SGSM3Q96HU1 749 aa4.25□□□□□ -1.73
RNU6-48P-201ENST00000384161 ALPK1Q96QP1 1244 aa4.25□□□□□ -1.73
RNU6-48P-201ENST00000384161 TMPRSS5Q9H3S3 457 aa4.25□□□□□ -1.73
RNU6-48P-201ENST00000384161 SP110Q9HB58 689 aa4.25□□□□□ -1.73
RNU6-48P-201ENST00000384161 ST7Q9NRC1 585 aa4.25□□□□□ -1.73
RNU6-48P-201ENST00000384161 TCFL5Q9UL49 500 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms