RNA–Protein interactions for RNA: ENST00000382519.8

CD9-204, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 800 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-204ENST00000382519 ACAD9Q9H845 621 aa21.45■■□□□ 1.02
CD9-204ENST00000382519 RNF146Q9NTX7 359 aa21.45■■□□□ 1.02
CD9-204ENST00000382519 FRMPD2Q68DX3 1309 aaPredicted RBP21.45■■□□□ 1.02
CD9-204ENST00000382519 DNAJC25-GNG10A0A024R161 153 aa21.44■■□□□ 1.02
CD9-204ENST00000382519 ALAS1P13196 640 aa21.44■■□□□ 1.02
CD9-204ENST00000382519 SYN1P17600 705 aa21.44■■□□□ 1.02
CD9-204ENST00000382519 IMMTQ16891 758 aaKnown RBP21.44■■□□□ 1.02
CD9-204ENST00000382519 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.44■■□□□ 1.02
CD9-204ENST00000382519 ZKSCAN3Q9BRR0 538 aa21.44■■□□□ 1.02
CD9-204ENST00000382519 ZNF536O15090 1300 aa21.44■■□□□ 1.02
CD9-204ENST00000382519 RARBP10826 455 aa21.43■■□□□ 1.02
CD9-204ENST00000382519 SLC16A2P36021 539 aa21.43■■□□□ 1.02
CD9-204ENST00000382519 ATN1P54259 1190 aaPredicted RBP21.43■■□□□ 1.02
CD9-204ENST00000382519 TTBK2Q6IQ55 1244 aa21.43■■□□□ 1.02
CD9-204ENST00000382519 MSL3Q8N5Y2 521 aaKnown RBP21.43■■□□□ 1.02
CD9-204ENST00000382519 IL25Q9H293 177 aa21.43■■□□□ 1.02
CD9-204ENST00000382519 GPCPD1Q9NPB8 672 aa21.43■■□□□ 1.02
CD9-204ENST00000382519 CTNNA3Q9UI47 895 aa21.43■■□□□ 1.02
CD9-204ENST00000382519 ZHX1Q9UKY1 873 aaPredicted RBP21.43■■□□□ 1.02
CD9-204ENST00000382519 SYNGAP1Q96PV0 1343 aa21.43■■□□□ 1.02
CD9-204ENST00000382519 KDM4AO75164 1064 aa21.42■■□□□ 1.02
CD9-204ENST00000382519 AKR1A1P14550 325 aa21.42■■□□□ 1.02
CD9-204ENST00000382519 TKFCQ3LXA3 575 aa21.42■■□□□ 1.02
CD9-204ENST00000382519 SYDE2Q5VT97 1194 aa21.42■■□□□ 1.02
CD9-204ENST00000382519 TRERF1Q96PN7 1200 aa21.42■■□□□ 1.02
CD9-204ENST00000382519 XPNPEP3Q9NQH7 507 aa21.42■■□□□ 1.02
CD9-204ENST00000382519 CCPG1Q9ULG6 757 aa21.42■■□□□ 1.02
CD9-204ENST00000382519 RAD50Q92878 1312 aa21.41■■□□□ 1.02
CD9-204ENST00000382519 B4E1Z4 1266 aa21.41■■□□□ 1.02
CD9-204ENST00000382519 ZNF865P0CJ78 1059 aaPredicted RBP21.41■■□□□ 1.02
CD9-204ENST00000382519 PDHBP11177 359 aa21.41■■□□□ 1.02
CD9-204ENST00000382519 FXR1P51114 621 aaKnown RBP eCLIP21.41■■□□□ 1.02
CD9-204ENST00000382519 LRRC41Q15345 812 aa21.41■■□□□ 1.02
CD9-204ENST00000382519 MAMDC4Q6UXC1 1216 aa21.41■■□□□ 1.02
CD9-204ENST00000382519 ZNF467Q7Z7K2 595 aaPredicted RBP21.41■■□□□ 1.02
CD9-204ENST00000382519 IQCA1Q86XH1 822 aa21.41■■□□□ 1.02
CD9-204ENST00000382519 LENG1Q96BZ8 264 aaPredicted RBP21.41■■□□□ 1.02
CD9-204ENST00000382519 TTC14Q96N46 770 aa21.41■■□□□ 1.02
CD9-204ENST00000382519 PRO3102Q9H379 93 aa21.41■■□□□ 1.02
CD9-204ENST00000382519 A1CFQ9NQ94 594 aaKnown RBP21.41■■□□□ 1.02
CD9-204ENST00000382519 LCTP09848 1927 aa21.4■■□□□ 1.02
CD9-204ENST00000382519 POTEB2H3BUK9 544 aa21.4■■□□□ 1.02
CD9-204ENST00000382519 RUFY2Q8WXA3 655 aa21.4■■□□□ 1.02
CD9-204ENST00000382519 RANBP17Q9H2T7 1088 aaKnown RBP21.4■■□□□ 1.02
CD9-204ENST00000382519 LRRC37A2A6NM11 1700 aa21.4■■□□□ 1.02
CD9-204ENST00000382519 SNAI1O95863 264 aaPredicted RBP21.39■■□□□ 1.01
CD9-204ENST00000382519 PGK1P00558 417 aa21.39■■□□□ 1.01
CD9-204ENST00000382519 ICAM1P05362 532 aa21.39■■□□□ 1.01
CD9-204ENST00000382519 NT5C2P49902 561 aa21.39■■□□□ 1.01
CD9-204ENST00000382519 CNTN2Q02246 1040 aa21.39■■□□□ 1.01
CD9-204ENST00000382519 MUM1L1Q5H9M0 696 aa21.39■■□□□ 1.01
CD9-204ENST00000382519 BTNL9Q6UXG8 535 aa21.39■■□□□ 1.01
CD9-204ENST00000382519 ARMCX2Q7L311 632 aa21.39■■□□□ 1.01
CD9-204ENST00000382519 FGD4Q96M96 766 aa21.39■■□□□ 1.01
CD9-204ENST00000382519 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.39■■□□□ 1.01
CD9-204ENST00000382519 ADCYAP1R1P41586 468 aa21.38■■□□□ 1.01
CD9-204ENST00000382519 RTP1P59025 263 aa21.38■■□□□ 1.01
CD9-204ENST00000382519 ZNF543Q08ER8 600 aa21.38■■□□□ 1.01
CD9-204ENST00000382519 CCDC178Q5BJE1 867 aa21.38■■□□□ 1.01
CD9-204ENST00000382519 NSMFQ6X4W1 530 aa21.38■■□□□ 1.01
CD9-204ENST00000382519 RNF180Q86T96 592 aa21.38■■□□□ 1.01
CD9-204ENST00000382519 FERMT2Q96AC1 680 aa21.38■■□□□ 1.01
CD9-204ENST00000382519 KRT23Q9C075 422 aa21.38■■□□□ 1.01
CD9-204ENST00000382519 CNNM2Q9H8M5 875 aa21.38■■□□□ 1.01
CD9-204ENST00000382519 PCDH10Q9P2E7 1040 aa21.38■■□□□ 1.01
CD9-204ENST00000382519 FAM184BQ9ULE4 1060 aa21.38■■□□□ 1.01
CD9-204ENST00000382519 ATP11BQ9Y2G3 1177 aa21.38■■□□□ 1.01
CD9-204ENST00000382519 CHMLP26374 656 aa21.37■■□□□ 1.01
CD9-204ENST00000382519 MAGEA10P43363 369 aaPredicted RBP21.37■■□□□ 1.01
CD9-204ENST00000382519 ACVR2BQ13705 512 aa21.37■■□□□ 1.01
CD9-204ENST00000382519 DGKHQ86XP1 1220 aa21.37■■□□□ 1.01
CD9-204ENST00000382519 CCDC144CPQ8IYA2 1237 aa21.37■■□□□ 1.01
CD9-204ENST00000382519 FAM133AQ8N9E0 248 aa21.37■■□□□ 1.01
CD9-204ENST00000382519 ZSCAN10Q96SZ4 725 aaPredicted RBP21.37■■□□□ 1.01
CD9-204ENST00000382519 KAT14Q9H8E8 782 aa21.37■■□□□ 1.01
CD9-204ENST00000382519 MYH6P13533 1939 aa21.37■■□□□ 1.01
CD9-204ENST00000382519 TNKSO95271 1327 aa21.36■■□□□ 1.01
CD9-204ENST00000382519 GOLGA8HP0CJ92 632 aa21.36■■□□□ 1.01
CD9-204ENST00000382519 SNHG28P0DPA3 235 aa21.36■■□□□ 1.01
CD9-204ENST00000382519 PNMA1Q8ND90 353 aa21.36■■□□□ 1.01
CD9-204ENST00000382519 GDF15Q99988 308 aa21.36■■□□□ 1.01
CD9-204ENST00000382519 UBAC1Q9BSL1 405 aa21.36■■□□□ 1.01
CD9-204ENST00000382519 ABHD16BQ9H3Z7 469 aa21.36■■□□□ 1.01
CD9-204ENST00000382519 SYNRGQ9UMZ2 1314 aa21.35■■□□□ 1.01
CD9-204ENST00000382519 A0A1W2PPC1 479 aa21.35■■□□□ 1.01
CD9-204ENST00000382519 GPATCH4Q5T3I0 446 aaKnown RBP21.35■■□□□ 1.01
CD9-204ENST00000382519 SLC39A5Q6ZMH5 540 aa21.35■■□□□ 1.01
CD9-204ENST00000382519 ENAHQ8N8S7 591 aaPredicted RBP21.35■■□□□ 1.01
CD9-204ENST00000382519 CYP39A1Q9NYL5 469 aa21.35■■□□□ 1.01
CD9-204ENST00000382519 ZSWIM5Q9P217 1185 aa21.35■■□□□ 1.01
CD9-204ENST00000382519 PHF24Q9UPV7 400 aa21.35■■□□□ 1.01
CD9-204ENST00000382519 LTBP2Q14767 1821 aa21.34■■□□□ 1.01
CD9-204ENST00000382519 DNAH12Q6ZR08 3092 aa21.34■■□□□ 1.01
CD9-204ENST00000382519 SOWAHBA6NEL2 793 aa21.34■■□□□ 1.01
CD9-204ENST00000382519 ASB14A6NK59 587 aa21.34■■□□□ 1.01
CD9-204ENST00000382519 ADAMTS4O75173 837 aa21.34■■□□□ 1.01
CD9-204ENST00000382519 CCDC144BQ3MJ40 725 aa21.34■■□□□ 1.01
CD9-204ENST00000382519 PRKAG2Q9UGJ0 569 aa21.34■■□□□ 1.01
CD9-204ENST00000382519 NFIBO00712 420 aa21.33■■□□□ 1.01
CD9-204ENST00000382519 MDM2Q00987 491 aaPredicted RBP21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms