RNA–Protein interactions for RNA: ENST00000382515.6

CD9-202, Transcript of CD9 molecule, humanhuman

TSL 5 BASIC

Gene CD9, Length 1,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-202ENST00000382515 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.52■□□□□ 0.88
CD9-202ENST00000382515 MICU3Q86XE3 530 aa20.52■□□□□ 0.88
CD9-202ENST00000382515 CPXCR1Q8N123 301 aa20.52■□□□□ 0.88
CD9-202ENST00000382515 JMJD4Q9H9V9 463 aa20.52■□□□□ 0.88
CD9-202ENST00000382515 ZBTB5O15062 677 aa20.51■□□□□ 0.87
CD9-202ENST00000382515 DHX16O60231 1041 aaKnown RBP20.51■□□□□ 0.87
CD9-202ENST00000382515 ERCC3P19447 782 aa20.51■□□□□ 0.87
CD9-202ENST00000382515 PDIA3P30101 505 aaKnown RBP20.51■□□□□ 0.87
CD9-202ENST00000382515 SNRNP48Q6IEG0 339 aaKnown RBP20.51■□□□□ 0.87
CD9-202ENST00000382515 RASGRP2Q7LDG7 609 aa20.51■□□□□ 0.87
CD9-202ENST00000382515 NCAPG2Q86XI2 1143 aa20.51■□□□□ 0.87
CD9-202ENST00000382515 SOCS4Q8WXH5 440 aa20.51■□□□□ 0.87
CD9-202ENST00000382515 TRIM47Q96LD4 638 aa20.51■□□□□ 0.87
CD9-202ENST00000382515 KIF2CQ99661 725 aa20.51■□□□□ 0.87
CD9-202ENST00000382515 RAVER2Q9HCJ3 691 aaKnown RBP20.51■□□□□ 0.87
CD9-202ENST00000382515 SLC5A4Q9NY91 659 aa20.51■□□□□ 0.87
CD9-202ENST00000382515 SRRDQ9UH36 339 aa20.51■□□□□ 0.87
CD9-202ENST00000382515 MYH4Q9Y623 1939 aa20.51■□□□□ 0.87
CD9-202ENST00000382515 PNMA6FA0A0J9YX94 578 aa20.5■□□□□ 0.87
CD9-202ENST00000382515 SLC15A5A6NIM6 579 aa20.5■□□□□ 0.87
CD9-202ENST00000382515 GOLGA8AA7E2F4 631 aa20.5■□□□□ 0.87
CD9-202ENST00000382515 GOLGA8BA8MQT2 603 aa20.5■□□□□ 0.87
CD9-202ENST00000382515 FCER1AP12319 257 aa20.5■□□□□ 0.87
CD9-202ENST00000382515 CPLX2Q6PUV4 134 aaKnown RBP20.5■□□□□ 0.87
CD9-202ENST00000382515 TMTC3Q6ZXV5 915 aa20.5■□□□□ 0.87
CD9-202ENST00000382515 OTOP1Q7RTM1 612 aa20.5■□□□□ 0.87
CD9-202ENST00000382515 GPR142Q7Z601 462 aa20.5■□□□□ 0.87
CD9-202ENST00000382515 RRP36Q96EU6 259 aaKnown RBP20.5■□□□□ 0.87
CD9-202ENST00000382515 NUDT12Q9BQG2 462 aa20.5■□□□□ 0.87
CD9-202ENST00000382515 MYL10Q9BUA6 226 aa20.5■□□□□ 0.87
CD9-202ENST00000382515 PORCNQ9H237 461 aa20.5■□□□□ 0.87
CD9-202ENST00000382515 VAT1LQ9HCJ6 419 aa20.5■□□□□ 0.87
CD9-202ENST00000382515 RBM27Q9P2N5 1060 aaKnown RBP20.5■□□□□ 0.87
CD9-202ENST00000382515 NAP1L2Q9ULW6 460 aaPredicted RBP20.5■□□□□ 0.87
CD9-202ENST00000382515 TRIM17Q9Y577 477 aa20.5■□□□□ 0.87
CD9-202ENST00000382515 ZNF536O15090 1300 aa20.5■□□□□ 0.87
CD9-202ENST00000382515 NID2Q14112 1375 aa20.49■□□□□ 0.87
CD9-202ENST00000382515 ST18O60284 1047 aa20.49■□□□□ 0.87
CD9-202ENST00000382515 PTPREP23469 700 aa20.49■□□□□ 0.87
CD9-202ENST00000382515 IRF5Q13568 498 aa20.49■□□□□ 0.87
CD9-202ENST00000382515 CDC37Q16543 378 aaPredicted RBP20.49■□□□□ 0.87
CD9-202ENST00000382515 IFFO2Q5TF58 517 aa20.49■□□□□ 0.87
CD9-202ENST00000382515 SAMD3Q8N6K7 520 aa20.49■□□□□ 0.87
CD9-202ENST00000382515 RGS22Q8NE09 1264 aa20.49■□□□□ 0.87
CD9-202ENST00000382515 AMNQ9BXJ7 453 aa20.49■□□□□ 0.87
CD9-202ENST00000382515 GJD2Q9UKL4 321 aa20.49■□□□□ 0.87
CD9-202ENST00000382515 CCPG1Q9ULG6 757 aa20.49■□□□□ 0.87
CD9-202ENST00000382515 XRCC5P13010 732 aaKnown RBP20.48■□□□□ 0.87
CD9-202ENST00000382515 MCM2P49736 904 aa20.48■□□□□ 0.87
CD9-202ENST00000382515 AK2P54819 239 aa20.48■□□□□ 0.87
CD9-202ENST00000382515 KCTD2Q14681 263 aa20.48■□□□□ 0.87
CD9-202ENST00000382515 CCDC174Q6PII3 467 aa20.48■□□□□ 0.87
CD9-202ENST00000382515 FBXO11Q86XK2 927 aa20.48■□□□□ 0.87
CD9-202ENST00000382515 TEX2Q8IWB9 1127 aa20.48■□□□□ 0.87
CD9-202ENST00000382515 TRMT44Q8IYL2 757 aaKnown RBP20.48■□□□□ 0.87
CD9-202ENST00000382515 SRBD1Q8N5C6 995 aaKnown RBP20.48■□□□□ 0.87
CD9-202ENST00000382515 AGBL1Q96MI9 1066 aa20.48■□□□□ 0.87
CD9-202ENST00000382515 ACAD9Q9H845 621 aa20.48■□□□□ 0.87
CD9-202ENST00000382515 SEC63Q9UGP8 760 aaKnown RBP20.48■□□□□ 0.87
CD9-202ENST00000382515 HPS5Q9UPZ3 1129 aa20.48■□□□□ 0.87
CD9-202ENST00000382515 CYTH3O43739 400 aa20.47■□□□□ 0.87
CD9-202ENST00000382515 RXRAP19793 462 aa20.47■□□□□ 0.87
CD9-202ENST00000382515 GRB14Q14449 540 aa20.47■□□□□ 0.87
CD9-202ENST00000382515 QRICH1Q2TAL8 776 aa20.47■□□□□ 0.87
CD9-202ENST00000382515 MORN1Q5T089 497 aa20.47■□□□□ 0.87
CD9-202ENST00000382515 WDR78Q5VTH9 848 aa20.47■□□□□ 0.87
CD9-202ENST00000382515 ZSCAN31Q96LW9 406 aaPredicted RBP20.47■□□□□ 0.87
CD9-202ENST00000382515 TRERF1Q96PN7 1200 aa20.47■□□□□ 0.87
CD9-202ENST00000382515 ARHGAP39Q9C0H5 1083 aa20.47■□□□□ 0.87
CD9-202ENST00000382515 FAM217BQ9NTX9 383 aaPredicted RBP20.47■□□□□ 0.87
CD9-202ENST00000382515 MAP3K20Q9NYL2 800 aaKnown RBP20.47■□□□□ 0.87
CD9-202ENST00000382515 LIMCH1Q9UPQ0 1083 aa20.47■□□□□ 0.87
CD9-202ENST00000382515 PTPN22Q9Y2R2 807 aa20.47■□□□□ 0.87
CD9-202ENST00000382515 MRPL11Q9Y3B7 192 aaKnown RBP20.47■□□□□ 0.87
CD9-202ENST00000382515 RIPK3Q9Y572 518 aa20.47■□□□□ 0.87
CD9-202ENST00000382515 ABCB11O95342 1321 aa20.47■□□□□ 0.87
CD9-202ENST00000382515 PEX10O60683 326 aa20.46■□□□□ 0.87
CD9-202ENST00000382515 HOXC6P09630 235 aa20.46■□□□□ 0.87
CD9-202ENST00000382515 ALAS1P13196 640 aa20.46■□□□□ 0.87
CD9-202ENST00000382515 CTGFP29279 349 aa20.46■□□□□ 0.87
CD9-202ENST00000382515 ADD1P35611 737 aaKnown RBP20.46■□□□□ 0.87
CD9-202ENST00000382515 RGS2P41220 211 aa20.46■□□□□ 0.87
CD9-202ENST00000382515 FBXO46Q6PJ61 603 aaPredicted RBP20.46■□□□□ 0.87
CD9-202ENST00000382515 NBPF11Q86T75 865 aa20.46■□□□□ 0.87
CD9-202ENST00000382515 MCF2L2Q86YR7 1114 aa20.46■□□□□ 0.87
CD9-202ENST00000382515 CCDC144CPQ8IYA2 1237 aa20.46■□□□□ 0.87
CD9-202ENST00000382515 PXYLP1Q8TE99 480 aa20.46■□□□□ 0.87
CD9-202ENST00000382515 USP6NLQ92738 828 aa20.46■□□□□ 0.87
CD9-202ENST00000382515 SLKQ9H2G2 1235 aaPredicted RBP20.46■□□□□ 0.87
CD9-202ENST00000382515 CPVLQ9H3G5 476 aa20.46■□□□□ 0.87
CD9-202ENST00000382515 DIS3Q9Y2L1 958 aaKnown RBP20.46■□□□□ 0.87
CD9-202ENST00000382515 CPLX1O14810 134 aa20.45■□□□□ 0.86
CD9-202ENST00000382515 PFKFB2O60825 505 aa20.45■□□□□ 0.86
CD9-202ENST00000382515 CDKL5O76039 1030 aa20.45■□□□□ 0.86
CD9-202ENST00000382515 IFNAR1P17181 557 aa20.45■□□□□ 0.86
CD9-202ENST00000382515 FLT3LGP49771 235 aa20.45■□□□□ 0.86
CD9-202ENST00000382515 MAP2K5Q13163 448 aa20.45■□□□□ 0.86
CD9-202ENST00000382515 PIGSQ96S52 555 aa20.45■□□□□ 0.86
CD9-202ENST00000382515 MMP19Q99542 508 aa20.45■□□□□ 0.86
CD9-202ENST00000382515 RNF146Q9NTX7 359 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms