RNA–Protein interactions for RNA: ENST00000381897.5

RFC1-202, Transcript of replication factor C subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFC1, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-202ENST00000381897 TAB3Q8N5C8 712 aaPredicted RBP6.3□□□□□ -1.4
RFC1-202ENST00000381897 PMM1Q92871 262 aa6.3□□□□□ -1.4
RFC1-202ENST00000381897 HAUS4Q9H6D7 363 aa6.3□□□□□ -1.4
RFC1-202ENST00000381897 C19orf44Q9H6X5 657 aa6.3□□□□□ -1.4
RFC1-202ENST00000381897 GUCA1BQ9UMX6 200 aa6.3□□□□□ -1.4
RFC1-202ENST00000381897 PXDNLA1KZ92 1463 aa6.3□□□□□ -1.4
RFC1-202ENST00000381897 PPRC1Q5VV67 1664 aaKnown RBP6.3□□□□□ -1.4
RFC1-202ENST00000381897 USP42Q9H9J4 1324 aaKnown RBP6.3□□□□□ -1.4
RFC1-202ENST00000381897 BUB1BO60566 1050 aaPredicted RBP6.3□□□□□ -1.4
RFC1-202ENST00000381897 LUC7L3O95232 432 aaKnown RBP6.3□□□□□ -1.4
RFC1-202ENST00000381897 STARD3NLO95772 234 aa6.3□□□□□ -1.4
RFC1-202ENST00000381897 RXRBP28702 533 aa6.3□□□□□ -1.4
RFC1-202ENST00000381897 TRIM32Q13049 653 aa6.3□□□□□ -1.4
RFC1-202ENST00000381897 PLEKHO1Q53GL0 409 aaPredicted RBP6.3□□□□□ -1.4
RFC1-202ENST00000381897 NBPF6Q5VWK0 638 aa6.3□□□□□ -1.4
RFC1-202ENST00000381897 NBPF5PQ86XG9 351 aaPredicted RBP6.3□□□□□ -1.4
RFC1-202ENST00000381897 IFT20Q8IY31 132 aa6.3□□□□□ -1.4
RFC1-202ENST00000381897 CHPFQ8IZ52 775 aa6.3□□□□□ -1.4
RFC1-202ENST00000381897 CHAC2Q8WUX2 184 aa6.3□□□□□ -1.4
RFC1-202ENST00000381897 NBPF4Q96M43 638 aa6.3□□□□□ -1.4
RFC1-202ENST00000381897 DSEQ9UL01 958 aa6.3□□□□□ -1.4
RFC1-202ENST00000381897 KCNH3Q9ULD8 1083 aa6.3□□□□□ -1.4
RFC1-202ENST00000381897 NOD1Q9Y239 953 aa6.3□□□□□ -1.4
RFC1-202ENST00000381897 NDC80O14777 642 aa6.3□□□□□ -1.4
RFC1-202ENST00000381897 GCKP35557 465 aa6.3□□□□□ -1.4
RFC1-202ENST00000381897 CCDC122Q5T0U0 273 aa6.3□□□□□ -1.4
RFC1-202ENST00000381897 ADAT2Q7Z6V5 191 aaKnown RBP6.3□□□□□ -1.4
RFC1-202ENST00000381897 ALG1Q9BT22 464 aa6.3□□□□□ -1.4
RFC1-202ENST00000381897 MKS1Q9NXB0 559 aa6.3□□□□□ -1.4
RFC1-202ENST00000381897 SYNRGQ9UMZ2 1314 aa6.3□□□□□ -1.4
RFC1-202ENST00000381897 ADCY9O60503 1353 aa6.3□□□□□ -1.4
RFC1-202ENST00000381897 KLF18A0A0U1RQI7 1052 aa6.3□□□□□ -1.4
RFC1-202ENST00000381897 PPP6R2O75170 966 aa6.3□□□□□ -1.4
RFC1-202ENST00000381897 MARCKSP29966 332 aaPredicted RBP6.3□□□□□ -1.4
RFC1-202ENST00000381897 IARSP41252 1262 aaKnown RBP6.3□□□□□ -1.4
RFC1-202ENST00000381897 PAK2Q13177 524 aa6.3□□□□□ -1.4
RFC1-202ENST00000381897 SEPT7Q16181 437 aaKnown RBP6.3□□□□□ -1.4
RFC1-202ENST00000381897 P3H1Q32P28 736 aa6.3□□□□□ -1.4
RFC1-202ENST00000381897 CACNA2D4Q7Z3S7 1137 aa6.3□□□□□ -1.4
RFC1-202ENST00000381897 FMR1NBQ8N0W7 255 aaPredicted RBP6.3□□□□□ -1.4
RFC1-202ENST00000381897 KCNB2Q92953 911 aa6.3□□□□□ -1.4
RFC1-202ENST00000381897 HAUS2Q9NVX0 235 aa6.3□□□□□ -1.4
RFC1-202ENST00000381897 LRFN1Q9P244 771 aa6.3□□□□□ -1.4
RFC1-202ENST00000381897 KRT37O76014 449 aa6.29□□□□□ -1.4
RFC1-202ENST00000381897 MYBL2P10244 700 aa6.29□□□□□ -1.4
RFC1-202ENST00000381897 METAP2P50579 478 aaKnown RBP eCLIP6.29□□□□□ -1.4
RFC1-202ENST00000381897 ADKP55263 362 aaKnown RBP6.29□□□□□ -1.4
RFC1-202ENST00000381897 PUM3Q15397 648 aaKnown RBP6.29□□□□□ -1.4
RFC1-202ENST00000381897 SNAP47Q5SQN1 464 aa6.29□□□□□ -1.4
RFC1-202ENST00000381897 SH2D4BQ5SQS7 431 aa6.29□□□□□ -1.4
RFC1-202ENST00000381897 PACS2Q86VP3 889 aa6.29□□□□□ -1.4
RFC1-202ENST00000381897 SULF1Q8IWU6 871 aa6.29□□□□□ -1.4
RFC1-202ENST00000381897 LRRC59Q96AG4 307 aaKnown RBP6.29□□□□□ -1.4
RFC1-202ENST00000381897 CNDP2Q96KP4 475 aaKnown RBP6.29□□□□□ -1.4
RFC1-202ENST00000381897 FAM227BQ96M60 508 aa6.29□□□□□ -1.4
RFC1-202ENST00000381897 ANAPC4Q9UJX5 808 aa6.29□□□□□ -1.4
RFC1-202ENST00000381897 ARAP3Q8WWN8 1544 aa6.29□□□□□ -1.4
RFC1-202ENST00000381897 RFX7Q2KHR2 1363 aa6.29□□□□□ -1.4
RFC1-202ENST00000381897 CDC42BPGQ6DT37 1551 aa6.29□□□□□ -1.4
RFC1-202ENST00000381897 PI4KAP2A4QPH2 592 aa6.29□□□□□ -1.4
RFC1-202ENST00000381897 TRIM75PA6NK02 468 aa6.29□□□□□ -1.4
RFC1-202ENST00000381897 GCOM1H8Y6P7 765 aaPredicted RBP6.29□□□□□ -1.4
RFC1-202ENST00000381897 IRS4O14654 1257 aaPredicted RBP6.29□□□□□ -1.4
RFC1-202ENST00000381897 CEP104O60308 925 aa6.29□□□□□ -1.4
RFC1-202ENST00000381897 ZFYP08048 801 aaPredicted RBP6.29□□□□□ -1.4
RFC1-202ENST00000381897 MYZAPP0CAP1 466 aa6.29□□□□□ -1.4
RFC1-202ENST00000381897 ELF1P32519 619 aa6.29□□□□□ -1.4
RFC1-202ENST00000381897 POU5F1Q01860 360 aaKnown RBP6.29□□□□□ -1.4
RFC1-202ENST00000381897 POSTNQ15063 836 aa6.29□□□□□ -1.4
RFC1-202ENST00000381897 NBPF9Q3BBW0 867 aa6.29□□□□□ -1.4
RFC1-202ENST00000381897 TSGA10IPQ3SY00 556 aa6.29□□□□□ -1.4
RFC1-202ENST00000381897 RUFY4Q6ZNE9 571 aa6.29□□□□□ -1.4
RFC1-202ENST00000381897 CCDC149Q6ZUS6 474 aa6.29□□□□□ -1.4
RFC1-202ENST00000381897 PI4KAP1Q8N8J0 262 aa6.29□□□□□ -1.4
RFC1-202ENST00000381897 CCHCR1Q8TD31 782 aa6.29□□□□□ -1.4
RFC1-202ENST00000381897 USP44Q9H0E7 712 aa6.29□□□□□ -1.4
RFC1-202ENST00000381897 DIS3Q9Y2L1 958 aaKnown RBP6.29□□□□□ -1.4
RFC1-202ENST00000381897 LUC7L2Q9Y383 392 aaKnown RBP6.29□□□□□ -1.4
RFC1-202ENST00000381897 ARPC4-TTLL3A0A0A6YYG9 625 aa6.29□□□□□ -1.4
RFC1-202ENST00000381897 FGFR1OPO95684 399 aaKnown RBP6.29□□□□□ -1.4
RFC1-202ENST00000381897 GCFC2P16383 781 aaKnown RBP6.29□□□□□ -1.4
RFC1-202ENST00000381897 SOX5P35711 763 aa6.29□□□□□ -1.4
RFC1-202ENST00000381897 PLCD1P51178 756 aa6.29□□□□□ -1.4
RFC1-202ENST00000381897 HSPA2P54652 639 aa6.29□□□□□ -1.4
RFC1-202ENST00000381897 EPHB4P54760 987 aa6.29□□□□□ -1.4
RFC1-202ENST00000381897 EML3Q32P44 896 aa6.29□□□□□ -1.4
RFC1-202ENST00000381897 LRRC31Q6UY01 552 aa6.29□□□□□ -1.4
RFC1-202ENST00000381897 ENAHQ8N8S7 591 aaPredicted RBP6.29□□□□□ -1.4
RFC1-202ENST00000381897 LINC00301Q8NCQ3 95 aa6.29□□□□□ -1.4
RFC1-202ENST00000381897 NSUN7Q8NE18 718 aaKnown RBP6.29□□□□□ -1.4
RFC1-202ENST00000381897 SLC7A3Q8WY07 619 aa6.29□□□□□ -1.4
RFC1-202ENST00000381897 P3H4Q92791 437 aa6.29□□□□□ -1.4
RFC1-202ENST00000381897 CAPZA3Q96KX2 299 aa6.29□□□□□ -1.4
RFC1-202ENST00000381897 ARPC5LQ9BPX5 153 aa6.29□□□□□ -1.4
RFC1-202ENST00000381897 DESI2Q9BSY9 194 aa6.29□□□□□ -1.4
RFC1-202ENST00000381897 DSCC1Q9BVC3 393 aa6.29□□□□□ -1.4
RFC1-202ENST00000381897 STMN4Q9H169 189 aaPredicted RBP6.29□□□□□ -1.4
RFC1-202ENST00000381897 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.29□□□□□ -1.43e-7■■■■□ 21.4
RFC1-202ENST00000381897 TULP4Q9NRJ4 1543 aa6.29□□□□□ -1.4
RFC1-202ENST00000381897 VWA3AA6NCI4 1184 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms