RNA–Protein interactions for RNA: ENST00000381342.6

SNRPB-201, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNRPB, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-201ENST00000381342 DDAH1O94760 285 aa18.86■□□□□ 0.61
SNRPB-201ENST00000381342 TFRCP02786 760 aaKnown RBP18.86■□□□□ 0.61
SNRPB-201ENST00000381342 RXRAP19793 462 aa18.86■□□□□ 0.61
SNRPB-201ENST00000381342 GJA8P48165 433 aa18.86■□□□□ 0.61
SNRPB-201ENST00000381342 ANAPC15P60006 121 aa18.86■□□□□ 0.61
SNRPB-201ENST00000381342 FGD1P98174 961 aa18.86■□□□□ 0.61
SNRPB-201ENST00000381342 Q6ZUG5 572 aa18.86■□□□□ 0.61
SNRPB-201ENST00000381342 RUFY3Q7L099 469 aa18.86■□□□□ 0.61
SNRPB-201ENST00000381342 NUP133Q8WUM0 1156 aa18.86■□□□□ 0.61
SNRPB-201ENST00000381342 TM6SF1Q9BZW5 370 aa18.86■□□□□ 0.61
SNRPB-201ENST00000381342 UBA5Q9GZZ9 404 aa18.86■□□□□ 0.61
SNRPB-201ENST00000381342 UNC93B1Q9H1C4 597 aa18.86■□□□□ 0.61
SNRPB-201ENST00000381342 RAVER2Q9HCJ3 691 aaKnown RBP18.86■□□□□ 0.61
SNRPB-201ENST00000381342 ZSWIM6Q9HCJ5 1215 aa18.86■□□□□ 0.61
SNRPB-201ENST00000381342 MAD2L2Q9UI95 211 aa18.86■□□□□ 0.61
SNRPB-201ENST00000381342 SMCHD1A6NHR9 2005 aa18.85■□□□□ 0.61
SNRPB-201ENST00000381342 XRCC5P13010 732 aaKnown RBP18.85■□□□□ 0.61
SNRPB-201ENST00000381342 PRPF38BQ5VTL8 546 aaKnown RBP18.85■□□□□ 0.61
SNRPB-201ENST00000381342 SNRNP48Q6IEG0 339 aaKnown RBP18.85■□□□□ 0.61
SNRPB-201ENST00000381342 CCDC174Q6PII3 467 aa18.85■□□□□ 0.61
SNRPB-201ENST00000381342 APOA5Q6Q788 366 aa18.85■□□□□ 0.61
SNRPB-201ENST00000381342 SGMS1Q86VZ5 419 aa18.85■□□□□ 0.61
SNRPB-201ENST00000381342 CCDC144CPQ8IYA2 1237 aa18.85■□□□□ 0.61
SNRPB-201ENST00000381342 CPXCR1Q8N123 301 aa18.85■□□□□ 0.61
SNRPB-201ENST00000381342 TMTC2Q8N394 836 aa18.85■□□□□ 0.61
SNRPB-201ENST00000381342 U2AF1L4Q8WU68 220 aaKnown RBP18.85■□□□□ 0.61
SNRPB-201ENST00000381342 HMX1Q9NP08 348 aaPredicted RBP18.85■□□□□ 0.61
SNRPB-201ENST00000381342 BRPF3Q9ULD4 1205 aa18.85■□□□□ 0.61
SNRPB-201ENST00000381342 CYP46A1Q9Y6A2 500 aa18.85■□□□□ 0.61
SNRPB-201ENST00000381342 KLF18A0A0U1RQI7 1052 aa18.84■□□□□ 0.61
SNRPB-201ENST00000381342 PALM3A6NDB9 673 aaPredicted RBP18.84■□□□□ 0.61
SNRPB-201ENST00000381342 SGPL1O95470 568 aa18.84■□□□□ 0.61
SNRPB-201ENST00000381342 TAL1P17542 331 aaPredicted RBP18.84■□□□□ 0.61
SNRPB-201ENST00000381342 SLC4A3P48751 1232 aa18.84■□□□□ 0.61
SNRPB-201ENST00000381342 MICU3Q86XE3 530 aa18.84■□□□□ 0.61
SNRPB-201ENST00000381342 BRF1Q92994 677 aa18.84■□□□□ 0.61
SNRPB-201ENST00000381342 TEX13BQ9BXU2 312 aa18.84■□□□□ 0.61
SNRPB-201ENST00000381342 RANBP17Q9H2T7 1088 aaKnown RBP18.84■□□□□ 0.61
SNRPB-201ENST00000381342 SLC12A7Q9Y666 1083 aa18.84■□□□□ 0.61
SNRPB-201ENST00000381342 ZNF536O15090 1300 aa18.83■□□□□ 0.61
SNRPB-201ENST00000381342 RPTORQ8N122 1335 aa18.83■□□□□ 0.61
SNRPB-201ENST00000381342 ZNFX1Q9P2E3 1918 aaKnown RBP18.83■□□□□ 0.6
SNRPB-201ENST00000381342 SLC15A5A6NIM6 579 aa18.83■□□□□ 0.6
SNRPB-201ENST00000381342 KLRF2D3W0D1 207 aa18.83■□□□□ 0.6
SNRPB-201ENST00000381342 FDX1P10109 184 aa18.83■□□□□ 0.6
SNRPB-201ENST00000381342 ERCC3P19447 782 aa18.83■□□□□ 0.6
SNRPB-201ENST00000381342 STAT3P40763 770 aa18.83■□□□□ 0.6
SNRPB-201ENST00000381342 APOBRQ0VD83 1088 aa18.83■□□□□ 0.6
SNRPB-201ENST00000381342 MAP2K5Q13163 448 aa18.83■□□□□ 0.6
SNRPB-201ENST00000381342 NCAPG2Q86XI2 1143 aa18.83■□□□□ 0.6
SNRPB-201ENST00000381342 RIOX2Q8IUF8 465 aa18.83■□□□□ 0.6
SNRPB-201ENST00000381342 SHCBP1Q8NEM2 672 aa18.83■□□□□ 0.6
SNRPB-201ENST00000381342 CTCFLQ8NI51 663 aaPredicted RBP18.83■□□□□ 0.6
SNRPB-201ENST00000381342 IL17RAQ96F46 866 aa18.83■□□□□ 0.6
SNRPB-201ENST00000381342 DEFB118Q96PH6 123 aa18.83■□□□□ 0.6
SNRPB-201ENST00000381342 SLC5A4Q9NY91 659 aa18.83■□□□□ 0.6
SNRPB-201ENST00000381342 PLXNA1Q9UIW2 1896 aa18.83■□□□□ 0.6
SNRPB-201ENST00000381342 BAZ2BQ9UIF8 2168 aaKnown RBP18.82■□□□□ 0.6
SNRPB-201ENST00000381342 ATP2A1O14983 1001 aa18.82■□□□□ 0.6
SNRPB-201ENST00000381342 STRNO43815 780 aa18.82■□□□□ 0.6
SNRPB-201ENST00000381342 DHX16O60231 1041 aaKnown RBP18.82■□□□□ 0.6
SNRPB-201ENST00000381342 CALM1P0DP23 149 aa18.82■□□□□ 0.6
SNRPB-201ENST00000381342 CALM2P0DP24 149 aa18.82■□□□□ 0.6
SNRPB-201ENST00000381342 CALM3P0DP25 149 aa18.82■□□□□ 0.6
SNRPB-201ENST00000381342 PTPREP23469 700 aa18.82■□□□□ 0.6
SNRPB-201ENST00000381342 TOB2Q14106 344 aaPredicted RBP18.82■□□□□ 0.6
SNRPB-201ENST00000381342 SLC35G1Q2M3R5 365 aa18.82■□□□□ 0.6
SNRPB-201ENST00000381342 MORN1Q5T089 497 aa18.82■□□□□ 0.6
SNRPB-201ENST00000381342 DPP9Q86TI2 863 aa18.82■□□□□ 0.6
SNRPB-201ENST00000381342 ADGRF4Q8IZF3 695 aa18.82■□□□□ 0.6
SNRPB-201ENST00000381342 AGBL1Q96MI9 1066 aa18.82■□□□□ 0.6
SNRPB-201ENST00000381342 APBA2Q99767 749 aa18.82■□□□□ 0.6
SNRPB-201ENST00000381342 AGXT2Q9BYV1 514 aa18.82■□□□□ 0.6
SNRPB-201ENST00000381342 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.82■□□□□ 0.6
SNRPB-201ENST00000381342 NAP1L2Q9ULW6 460 aaPredicted RBP18.82■□□□□ 0.6
SNRPB-201ENST00000381342 RIPK3Q9Y572 518 aa18.82■□□□□ 0.6
SNRPB-201ENST00000381342 GOLGA8BA8MQT2 603 aa18.81■□□□□ 0.6
SNRPB-201ENST00000381342 ZBTB43O43298 467 aa18.81■□□□□ 0.6
SNRPB-201ENST00000381342 SLC25A27O95847 323 aa18.81■□□□□ 0.6
SNRPB-201ENST00000381342 OAZ1P54368 228 aa18.81■□□□□ 0.6
SNRPB-201ENST00000381342 CDC37Q16543 378 aaPredicted RBP18.81■□□□□ 0.6
SNRPB-201ENST00000381342 MFSD14CQ5VZR4 134 aa18.81■□□□□ 0.6
SNRPB-201ENST00000381342 SYNE3Q6ZMZ3 975 aa18.81■□□□□ 0.6
SNRPB-201ENST00000381342 MAP3K14Q99558 947 aa18.81■□□□□ 0.6
SNRPB-201ENST00000381342 HTATIP2Q9BUP3 242 aa18.81■□□□□ 0.6
SNRPB-201ENST00000381342 C22orf23Q9BZE7 217 aa18.81■□□□□ 0.6
SNRPB-201ENST00000381342 MROH8Q9H579 483 aa18.81■□□□□ 0.6
SNRPB-201ENST00000381342 HOMER2Q9NSB8 354 aa18.81■□□□□ 0.6
SNRPB-201ENST00000381342 PDRG1Q9NUG6 133 aa18.81■□□□□ 0.6
SNRPB-201ENST00000381342 CCPG1Q9ULG6 757 aa18.81■□□□□ 0.6
SNRPB-201ENST00000381342 LCTP09848 1927 aa18.8■□□□□ 0.6
SNRPB-201ENST00000381342 PLEKHA8P1O95397 391 aa18.8■□□□□ 0.6
SNRPB-201ENST00000381342 ICAM1P05362 532 aa18.8■□□□□ 0.6
SNRPB-201ENST00000381342 KIF5BP33176 963 aa18.8■□□□□ 0.6
SNRPB-201ENST00000381342 FBXL16Q8N461 479 aa18.8■□□□□ 0.6
SNRPB-201ENST00000381342 TRIB2Q92519 343 aa18.8■□□□□ 0.6
SNRPB-201ENST00000381342 JMJD4Q9H9V9 463 aa18.8■□□□□ 0.6
SNRPB-201ENST00000381342 UPF2Q9HAU5 1272 aaKnown RBP18.8■□□□□ 0.6
SNRPB-201ENST00000381342 VAT1LQ9HCJ6 419 aa18.8■□□□□ 0.6
SNRPB-201ENST00000381342 GOLGA8AA7E2F4 631 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms