RNA–Protein interactions for RNA: ENST00000381337.6

THUMPD1-201, Transcript of THUMP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD1, Length 4,122 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-201ENST00000381337 HDAC6Q9UBN7 1215 aa12.64□□□□□ -0.39
THUMPD1-201ENST00000381337 TBX22Q9Y458 520 aa12.64□□□□□ -0.39
THUMPD1-201ENST00000381337 KCNA6P17658 529 aa12.64□□□□□ -0.39
THUMPD1-201ENST00000381337 EIF4A3P38919 411 aaKnown RBP12.64□□□□□ -0.39
THUMPD1-201ENST00000381337 FBXW10Q5XX13 1052 aa12.64□□□□□ -0.39
THUMPD1-201ENST00000381337 RBM43Q6ZSC3 357 aaKnown RBP12.64□□□□□ -0.39
THUMPD1-201ENST00000381337 DZIP3Q86Y13 1208 aaKnown RBP12.64□□□□□ -0.39
THUMPD1-201ENST00000381337 RAB3IPQ96QF0 476 aaPredicted RBP12.64□□□□□ -0.39
THUMPD1-201ENST00000381337 MRPL44Q9H9J2 332 aaKnown RBP12.64□□□□□ -0.39
THUMPD1-201ENST00000381337 IQSEC2Q5JU85 1478 aa12.64□□□□□ -0.39
THUMPD1-201ENST00000381337 SCG2P13521 617 aa12.64□□□□□ -0.39
THUMPD1-201ENST00000381337 CLUL1Q15846 466 aa12.64□□□□□ -0.39
THUMPD1-201ENST00000381337 MUM1Q2TAK8 710 aa12.64□□□□□ -0.39
THUMPD1-201ENST00000381337 REXO1L1PQ8IX06 675 aa12.64□□□□□ -0.39
THUMPD1-201ENST00000381337 MB21D1Q8N884 522 aa12.64□□□□□ -0.39
THUMPD1-201ENST00000381337 ENGASEQ8NFI3 743 aa12.64□□□□□ -0.39
THUMPD1-201ENST00000381337 U2AF1L4Q8WU68 220 aaKnown RBP12.64□□□□□ -0.39
THUMPD1-201ENST00000381337 P2RX5Q93086 422 aa12.64□□□□□ -0.39
THUMPD1-201ENST00000381337 HDAC9Q9UKV0 1011 aa12.64□□□□□ -0.39
THUMPD1-201ENST00000381337 CASP1P29466 404 aa12.63□□□□□ -0.39
THUMPD1-201ENST00000381337 CDC25AP30304 524 aa12.63□□□□□ -0.39
THUMPD1-201ENST00000381337 NAA35Q5VZE5 725 aa12.63□□□□□ -0.39
THUMPD1-201ENST00000381337 MYOCDQ8IZQ8 938 aa12.63□□□□□ -0.39
THUMPD1-201ENST00000381337 SUGCTQ9HAC7 445 aa12.63□□□□□ -0.39
THUMPD1-201ENST00000381337 FOXN1O15353 648 aa12.63□□□□□ -0.39
THUMPD1-201ENST00000381337 INF2Q27J81 1249 aa12.63□□□□□ -0.39
THUMPD1-201ENST00000381337 HHATQ5VTY9 493 aa12.63□□□□□ -0.39
THUMPD1-201ENST00000381337 ADAT2Q7Z6V5 191 aaKnown RBP12.63□□□□□ -0.39
THUMPD1-201ENST00000381337 HNRNPLLQ8WVV9 542 aaKnown RBP12.63□□□□□ -0.39
THUMPD1-201ENST00000381337 RIN2Q8WYP3 895 aaPredicted RBP12.63□□□□□ -0.39
THUMPD1-201ENST00000381337 MRRFQ96E11 262 aaKnown RBP12.63□□□□□ -0.39
THUMPD1-201ENST00000381337 PUS7LQ9H0K6 701 aaKnown RBP12.63□□□□□ -0.39
THUMPD1-201ENST00000381337 AATFQ9NY61 560 aaKnown RBP eCLIP12.63□□□□□ -0.39
THUMPD1-201ENST00000381337 PRAMEF22A3QJZ6 481 aa12.63□□□□□ -0.39
THUMPD1-201ENST00000381337 PDE8AO60658 829 aa12.63□□□□□ -0.39
THUMPD1-201ENST00000381337 FTCDO95954 541 aa12.63□□□□□ -0.39
THUMPD1-201ENST00000381337 MRPL12P52815 198 aaKnown RBP12.63□□□□□ -0.39
THUMPD1-201ENST00000381337 ZKSCAN8Q15776 578 aaPredicted RBP12.63□□□□□ -0.39
THUMPD1-201ENST00000381337 TC2NQ8N9U0 490 aa12.63□□□□□ -0.39
THUMPD1-201ENST00000381337 GBP5Q96PP8 586 aa12.63□□□□□ -0.39
THUMPD1-201ENST00000381337 LRRC7Q96NW7 1537 aa12.62□□□□□ -0.39
THUMPD1-201ENST00000381337 KIF1CO43896 1103 aaKnown RBP12.62□□□□□ -0.39
THUMPD1-201ENST00000381337 N4BP1O75113 896 aaKnown RBP12.62□□□□□ -0.39
THUMPD1-201ENST00000381337 CIB2O75838 187 aa12.62□□□□□ -0.39
THUMPD1-201ENST00000381337 STAT1P42224 750 aa12.62□□□□□ -0.39
THUMPD1-201ENST00000381337 TRAPPC10P48553 1259 aa12.62□□□□□ -0.39
THUMPD1-201ENST00000381337 TTLL7Q6ZT98 887 aa12.62□□□□□ -0.39
THUMPD1-201ENST00000381337 ZSCAN10Q96SZ4 725 aaPredicted RBP12.62□□□□□ -0.39
THUMPD1-201ENST00000381337 SLC24A3Q9HC58 644 aa12.62□□□□□ -0.39
THUMPD1-201ENST00000381337 NIP7Q9Y221 180 aaKnown RBP eCLIP12.62□□□□□ -0.39
THUMPD1-201ENST00000381337 ATP8A1Q9Y2Q0 1164 aa12.62□□□□□ -0.39
THUMPD1-201ENST00000381337 PCDHA13Q9Y5I0 950 aa12.62□□□□□ -0.39
THUMPD1-201ENST00000381337 GNA14O95837 355 aa12.62□□□□□ -0.39
THUMPD1-201ENST00000381337 KRT15P19012 456 aa12.62□□□□□ -0.39
THUMPD1-201ENST00000381337 ABCB4P21439 1286 aa12.62□□□□□ -0.39
THUMPD1-201ENST00000381337 LIFRP42702 1097 aa12.62□□□□□ -0.39
THUMPD1-201ENST00000381337 KIF11P52732 1056 aa12.62□□□□□ -0.39
THUMPD1-201ENST00000381337 DHX9Q08211 1270 aaKnown RBP12.62□□□□□ -0.39
THUMPD1-201ENST00000381337 CALCRLQ16602 461 aa12.62□□□□□ -0.39
THUMPD1-201ENST00000381337 USP37Q86T82 979 aa12.62□□□□□ -0.39
THUMPD1-201ENST00000381337 ZSWIM5Q9P217 1185 aa12.62□□□□□ -0.39
THUMPD1-201ENST00000381337 FRMD4BQ9Y2L6 1034 aa12.62□□□□□ -0.39
THUMPD1-201ENST00000381337 ABCA8O94911 1581 aa12.62□□□□□ -0.39
THUMPD1-201ENST00000381337 MEFVO15553 781 aaPredicted RBP12.62□□□□□ -0.39
THUMPD1-201ENST00000381337 SMIM24O75264 130 aa12.62□□□□□ -0.39
THUMPD1-201ENST00000381337 METTL16Q86W50 562 aaKnown RBP12.62□□□□□ -0.39
THUMPD1-201ENST00000381337 ARHGAP24Q8N264 748 aa12.62□□□□□ -0.39
THUMPD1-201ENST00000381337 ZNF579Q8NAF0 562 aaKnown RBP12.62□□□□□ -0.39
THUMPD1-201ENST00000381337 IQGAP3Q86VI3 1631 aa12.62□□□□□ -0.39
THUMPD1-201ENST00000381337 USP17L12C9JPN9 530 aa12.61□□□□□ -0.39
THUMPD1-201ENST00000381337 USP17L21D6R901 530 aa12.61□□□□□ -0.39
THUMPD1-201ENST00000381337 PRR29P0C7W0 189 aa12.61□□□□□ -0.39
THUMPD1-201ENST00000381337 CCNE1P24864 410 aa12.61□□□□□ -0.39
THUMPD1-201ENST00000381337 TCIRG1Q13488 830 aa12.61□□□□□ -0.39
THUMPD1-201ENST00000381337 NBPF9Q3BBW0 867 aa12.61□□□□□ -0.39
THUMPD1-201ENST00000381337 GLE1Q53GS7 698 aaKnown RBP12.61□□□□□ -0.39
THUMPD1-201ENST00000381337 FAM133BQ5BKY9 247 aaKnown RBP12.61□□□□□ -0.39
THUMPD1-201ENST00000381337 FAM47AQ5JRC9 791 aa12.61□□□□□ -0.39
THUMPD1-201ENST00000381337 STOX1Q6ZVD7 989 aa12.61□□□□□ -0.39
THUMPD1-201ENST00000381337 TBC1D1Q86TI0 1168 aaPredicted RBP12.61□□□□□ -0.39
THUMPD1-201ENST00000381337 EHMT1Q9H9B1 1298 aa12.61□□□□□ -0.39
THUMPD1-201ENST00000381337 FAM114A2Q9NRY5 505 aa12.61□□□□□ -0.39
THUMPD1-201ENST00000381337 TUBE1Q9UJT0 475 aa12.61□□□□□ -0.39
THUMPD1-201ENST00000381337 DENND2AQ9ULE3 1009 aa12.61□□□□□ -0.39
THUMPD1-201ENST00000381337 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.61□□□□□ -0.39
THUMPD1-201ENST00000381337 EXOC5O00471 708 aa12.61□□□□□ -0.39
THUMPD1-201ENST00000381337 TECP42680 631 aa12.61□□□□□ -0.39
THUMPD1-201ENST00000381337 IRAK1P51617 712 aa12.61□□□□□ -0.39
THUMPD1-201ENST00000381337 ANKRD20A3Q5VUR7 823 aa12.61□□□□□ -0.39
THUMPD1-201ENST00000381337 WDR66Q8TBY9 1149 aa12.61□□□□□ -0.39
THUMPD1-201ENST00000381337 CNOT10Q9H9A5 744 aaKnown RBP12.61□□□□□ -0.39
THUMPD1-201ENST00000381337 GDAQ9Y2T3 454 aa12.61□□□□□ -0.39
THUMPD1-201ENST00000381337 CD2APQ9Y5K6 639 aa12.61□□□□□ -0.39
THUMPD1-201ENST00000381337 MAP3K4Q9Y6R4 1608 aa12.61□□□□□ -0.39
THUMPD1-201ENST00000381337 USP42Q9H9J4 1324 aaKnown RBP12.61□□□□□ -0.39
THUMPD1-201ENST00000381337 TARSL2A2RTX5 802 aaKnown RBP12.61□□□□□ -0.39
THUMPD1-201ENST00000381337 MAN2A1Q16706 1144 aa12.61□□□□□ -0.39
THUMPD1-201ENST00000381337 BEND6Q5SZJ8 279 aaPredicted RBP12.61□□□□□ -0.39
THUMPD1-201ENST00000381337 CCDC62Q6P9F0 684 aa12.61□□□□□ -0.39
THUMPD1-201ENST00000381337 RAD9BQ6WBX8 426 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms