RNA–Protein interactions for RNA: ENST00000381037.4

CDPF1-202, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 1 (best)

Gene CDPF1, Length 1,600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-202ENST00000381037 RIOX1Q9H6W3 641 aa23.27■■□□□ 1.32
CDPF1-202ENST00000381037 CYTH3O43739 400 aa23.26■■□□□ 1.31
CDPF1-202ENST00000381037 ICAM1P05362 532 aa23.26■■□□□ 1.31
CDPF1-202ENST00000381037 PTPREP23469 700 aa23.26■■□□□ 1.31
CDPF1-202ENST00000381037 RBM25P49756 843 aaKnown RBP23.26■■□□□ 1.31
CDPF1-202ENST00000381037 FLT3LGP49771 235 aa23.26■■□□□ 1.31
CDPF1-202ENST00000381037 FBXO46Q6PJ61 603 aaPredicted RBP23.26■■□□□ 1.31
CDPF1-202ENST00000381037 NCAPG2Q86XI2 1143 aa23.26■■□□□ 1.31
CDPF1-202ENST00000381037 FANCBQ8NB91 859 aa23.26■■□□□ 1.31
CDPF1-202ENST00000381037 KIF2CQ99661 725 aa23.26■■□□□ 1.31
CDPF1-202ENST00000381037 BACH2Q9BYV9 841 aa23.26■■□□□ 1.31
CDPF1-202ENST00000381037 COPB2P35606 906 aa23.26■■□□□ 1.31
CDPF1-202ENST00000381037 RCAN1P53805 252 aa23.26■■□□□ 1.31
CDPF1-202ENST00000381037 APOBRQ0VD83 1088 aa23.26■■□□□ 1.31
CDPF1-202ENST00000381037 GRB14Q14449 540 aa23.26■■□□□ 1.31
CDPF1-202ENST00000381037 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.26■■□□□ 1.31
CDPF1-202ENST00000381037 CCAR1Q8IX12 1150 aaKnown RBP23.26■■□□□ 1.31
CDPF1-202ENST00000381037 CTCFLQ8NI51 663 aaPredicted RBP23.26■■□□□ 1.31
CDPF1-202ENST00000381037 C22orf23Q9BZE7 217 aa23.26■■□□□ 1.31
CDPF1-202ENST00000381037 ALDH8A1Q9H2A2 487 aaPredicted RBP23.26■■□□□ 1.31
CDPF1-202ENST00000381037 CTDP1Q9Y5B0 961 aaPredicted RBP23.26■■□□□ 1.31
CDPF1-202ENST00000381037 PLXNB2O15031 1838 aa23.25■■□□□ 1.31
CDPF1-202ENST00000381037 KLF18A0A0U1RQI7 1052 aa23.25■■□□□ 1.31
CDPF1-202ENST00000381037 STRNO43815 780 aa23.25■■□□□ 1.31
CDPF1-202ENST00000381037 KIF5BP33176 963 aa23.25■■□□□ 1.31
CDPF1-202ENST00000381037 IRF5Q13568 498 aa23.25■■□□□ 1.31
CDPF1-202ENST00000381037 CCDC174Q6PII3 467 aa23.25■■□□□ 1.31
CDPF1-202ENST00000381037 MICU3Q86XE3 530 aa23.25■■□□□ 1.31
CDPF1-202ENST00000381037 RAB11FIP4Q86YS3 637 aa23.25■■□□□ 1.31
CDPF1-202ENST00000381037 PTCH2Q9Y6C5 1203 aa23.25■■□□□ 1.31
CDPF1-202ENST00000381037 SMARCA1P28370 1054 aa23.24■■□□□ 1.31
CDPF1-202ENST00000381037 FGD1P98174 961 aa23.24■■□□□ 1.31
CDPF1-202ENST00000381037 ABRAQ8N0Z2 381 aa23.24■■□□□ 1.31
CDPF1-202ENST00000381037 FAM217BQ9NTX9 383 aaPredicted RBP23.24■■□□□ 1.31
CDPF1-202ENST00000381037 HPS5Q9UPZ3 1129 aa23.24■■□□□ 1.31
CDPF1-202ENST00000381037 SLC15A5A6NIM6 579 aa23.23■■□□□ 1.31
CDPF1-202ENST00000381037 ZBTB43O43298 467 aa23.23■■□□□ 1.31
CDPF1-202ENST00000381037 WDR78Q5VTH9 848 aa23.23■■□□□ 1.31
CDPF1-202ENST00000381037 SYNE3Q6ZMZ3 975 aa23.23■■□□□ 1.31
CDPF1-202ENST00000381037 CCDC144CPQ8IYA2 1237 aa23.23■■□□□ 1.31
CDPF1-202ENST00000381037 SOCS4Q8WXH5 440 aa23.23■■□□□ 1.31
CDPF1-202ENST00000381037 VAT1LQ9HCJ6 419 aa23.23■■□□□ 1.31
CDPF1-202ENST00000381037 PDRG1Q9NUG6 133 aa23.23■■□□□ 1.31
CDPF1-202ENST00000381037 PLEKHA8P1O95397 391 aa23.22■■□□□ 1.31
CDPF1-202ENST00000381037 CDC37Q16543 378 aaPredicted RBP23.22■■□□□ 1.31
CDPF1-202ENST00000381037 SRBD1Q8N5C6 995 aaKnown RBP23.22■■□□□ 1.31
CDPF1-202ENST00000381037 CHST13Q8NET6 341 aa23.22■■□□□ 1.31
CDPF1-202ENST00000381037 NUDT12Q9BQG2 462 aa23.22■■□□□ 1.31
CDPF1-202ENST00000381037 LZTS2Q9BRK4 669 aa23.22■■□□□ 1.31
CDPF1-202ENST00000381037 SPZ1Q9BXG8 430 aa23.22■■□□□ 1.31
CDPF1-202ENST00000381037 NID2Q14112 1375 aa23.22■■□□□ 1.31
CDPF1-202ENST00000381037 HOXC6P09630 235 aa23.22■■□□□ 1.31
CDPF1-202ENST00000381037 TAL1P17542 331 aaPredicted RBP23.22■■□□□ 1.31
CDPF1-202ENST00000381037 GNAQP50148 359 aa23.22■■□□□ 1.31
CDPF1-202ENST00000381037 MAP2K5Q13163 448 aa23.22■■□□□ 1.31
CDPF1-202ENST00000381037 QRICH1Q2TAL8 776 aa23.22■■□□□ 1.31
CDPF1-202ENST00000381037 TKFCQ3LXA3 575 aa23.22■■□□□ 1.31
CDPF1-202ENST00000381037 CCPG1Q9ULG6 757 aa23.22■■□□□ 1.31
CDPF1-202ENST00000381037 IVNS1ABPQ9Y6Y0 642 aa23.22■■□□□ 1.31
CDPF1-202ENST00000381037 SMCHD1A6NHR9 2005 aa23.21■■□□□ 1.31
CDPF1-202ENST00000381037 FCER1AP12319 257 aa23.21■■□□□ 1.31
CDPF1-202ENST00000381037 XRCC5P13010 732 aaKnown RBP23.21■■□□□ 1.31
CDPF1-202ENST00000381037 ADORA2AP29274 412 aa23.21■■□□□ 1.31
CDPF1-202ENST00000381037 FUT2Q10981 343 aa23.21■■□□□ 1.31
CDPF1-202ENST00000381037 TMTC3Q6ZXV5 915 aa23.21■■□□□ 1.31
CDPF1-202ENST00000381037 CMTR1Q8N1G2 835 aaKnown RBP23.21■■□□□ 1.31
CDPF1-202ENST00000381037 PNMA2Q9UL42 364 aa23.21■■□□□ 1.31
CDPF1-202ENST00000381037 ZNF236Q9UL36 1845 aa23.2■■□□□ 1.31
CDPF1-202ENST00000381037 ZBTB5O15062 677 aa23.2■■□□□ 1.3
CDPF1-202ENST00000381037 PPP1R11O60927 126 aaPredicted RBP23.2■■□□□ 1.3
CDPF1-202ENST00000381037 ALAS1P13196 640 aa23.2■■□□□ 1.3
CDPF1-202ENST00000381037 PDIA3P30101 505 aaKnown RBP23.2■■□□□ 1.3
CDPF1-202ENST00000381037 CDC27P30260 824 aa23.2■■□□□ 1.3
CDPF1-202ENST00000381037 SLC4A3P48751 1232 aa23.2■■□□□ 1.3
CDPF1-202ENST00000381037 PXYLP1Q8TE99 480 aa23.2■■□□□ 1.3
CDPF1-202ENST00000381037 TRERF1Q96PN7 1200 aa23.2■■□□□ 1.3
CDPF1-202ENST00000381037 PIGSQ96S52 555 aa23.2■■□□□ 1.3
CDPF1-202ENST00000381037 CWC22Q9HCG8 908 aaKnown RBP23.2■■□□□ 1.3
CDPF1-202ENST00000381037 RNF146Q9NTX7 359 aa23.2■■□□□ 1.3
CDPF1-202ENST00000381037 FBXO40Q9UH90 709 aa23.2■■□□□ 1.3
CDPF1-202ENST00000381037 BAZ2BQ9UIF8 2168 aaKnown RBP23.2■■□□□ 1.3
CDPF1-202ENST00000381037 DHX16O60231 1041 aaKnown RBP23.19■■□□□ 1.3
CDPF1-202ENST00000381037 COBLO75128 1261 aa23.19■■□□□ 1.3
CDPF1-202ENST00000381037 PPP2R5BQ15173 497 aa23.19■■□□□ 1.3
CDPF1-202ENST00000381037 RTN1Q16799 776 aa23.19■■□□□ 1.3
CDPF1-202ENST00000381037 MUM1L1Q5H9M0 696 aa23.19■■□□□ 1.3
CDPF1-202ENST00000381037 RAET1EQ8TD07 263 aa23.19■■□□□ 1.3
CDPF1-202ENST00000381037 ACAD9Q9H845 621 aa23.19■■□□□ 1.3
CDPF1-202ENST00000381037 HOMER2Q9NSB8 354 aa23.19■■□□□ 1.3
CDPF1-202ENST00000381037 RBM28Q9NW13 759 aaKnown RBP23.19■■□□□ 1.3
CDPF1-202ENST00000381037 DNAJC25-GNG10A0A024R161 153 aa23.19■■□□□ 1.3
CDPF1-202ENST00000381037 GOLGA8AA7E2F4 631 aa23.19■■□□□ 1.3
CDPF1-202ENST00000381037 GOLGA8BA8MQT2 603 aa23.19■■□□□ 1.3
CDPF1-202ENST00000381037 IGHA2P01877 340 aa23.19■■□□□ 1.3
CDPF1-202ENST00000381037 CYP2B6P20813 491 aa23.19■■□□□ 1.3
CDPF1-202ENST00000381037 RGS2P41220 211 aa23.19■■□□□ 1.3
CDPF1-202ENST00000381037 KCTD2Q14681 263 aa23.19■■□□□ 1.3
CDPF1-202ENST00000381037 CLEC4DQ8WXI8 215 aa23.19■■□□□ 1.3
CDPF1-202ENST00000381037 ZNF274Q96GC6 653 aaPredicted RBP23.19■■□□□ 1.3
CDPF1-202ENST00000381037 MMP19Q99542 508 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms