RNA–Protein interactions for RNA: ENST00000381029.4

VCX3B-201, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-201ENST00000381029 ADORA2AP29274 412 aa17.3■□□□□ 0.36
VCX3B-201ENST00000381029 COPB2P35606 906 aa17.3■□□□□ 0.36
VCX3B-201ENST00000381029 CCL14Q16627 93 aa17.3■□□□□ 0.36
VCX3B-201ENST00000381029 MAP3K21Q5TCX8 1036 aa17.3■□□□□ 0.36
VCX3B-201ENST00000381029 NBPF11Q86T75 865 aa17.3■□□□□ 0.36
VCX3B-201ENST00000381029 ZNF654Q8IZM8 581 aa17.3■□□□□ 0.36
VCX3B-201ENST00000381029 FBXL16Q8N461 479 aa17.3■□□□□ 0.36
VCX3B-201ENST00000381029 TCEANC2Q96MN5 208 aa17.3■□□□□ 0.36
VCX3B-201ENST00000381029 FLRT1Q9NZU1 646 aa17.3■□□□□ 0.36
VCX3B-201ENST00000381029 SMCHD1A6NHR9 2005 aa17.3■□□□□ 0.36
VCX3B-201ENST00000381029 ERICH2A1L162 156 aa17.29■□□□□ 0.36
VCX3B-201ENST00000381029 CYTH3O43739 400 aa17.29■□□□□ 0.36
VCX3B-201ENST00000381029 RGS2P41220 211 aa17.29■□□□□ 0.36
VCX3B-201ENST00000381029 IKQ13123 557 aaPredicted RBP17.29■□□□□ 0.36
VCX3B-201ENST00000381029 CCAR1Q8IX12 1150 aaKnown RBP17.29■□□□□ 0.36
VCX3B-201ENST00000381029 ADGRF4Q8IZF3 695 aa17.29■□□□□ 0.36
VCX3B-201ENST00000381029 TMTC2Q8N394 836 aa17.29■□□□□ 0.36
VCX3B-201ENST00000381029 CHST13Q8NET6 341 aa17.29■□□□□ 0.36
VCX3B-201ENST00000381029 APBA2Q99767 749 aa17.29■□□□□ 0.36
VCX3B-201ENST00000381029 JMJD4Q9H9V9 463 aa17.29■□□□□ 0.36
VCX3B-201ENST00000381029 KIAA0100Q14667 2235 aaKnown RBP17.29■□□□□ 0.36
VCX3B-201ENST00000381029 DDAH1O94760 285 aa17.28■□□□□ 0.36
VCX3B-201ENST00000381029 HMGB1P09429 215 aaKnown RBP17.28■□□□□ 0.36
VCX3B-201ENST00000381029 FCER1AP12319 257 aa17.28■□□□□ 0.36
VCX3B-201ENST00000381029 TRIM32Q13049 653 aa17.28■□□□□ 0.36
VCX3B-201ENST00000381029 MTFR1Q15390 333 aa17.28■□□□□ 0.36
VCX3B-201ENST00000381029 ZNF792Q3KQV3 632 aa17.28■□□□□ 0.36
VCX3B-201ENST00000381029 FGD4Q96M96 766 aa17.28■□□□□ 0.36
VCX3B-201ENST00000381029 JAKMIP1Q96N16 626 aaKnown RBP17.28■□□□□ 0.36
VCX3B-201ENST00000381029 MYL10Q9BUA6 226 aa17.28■□□□□ 0.36
VCX3B-201ENST00000381029 RIOX1Q9H6W3 641 aa17.28■□□□□ 0.36
VCX3B-201ENST00000381029 ZSWIM6Q9HCJ5 1215 aa17.28■□□□□ 0.36
VCX3B-201ENST00000381029 BRPF3Q9ULD4 1205 aa17.28■□□□□ 0.36
VCX3B-201ENST00000381029 ISY1Q9ULR0 285 aaKnown RBP17.28■□□□□ 0.36
VCX3B-201ENST00000381029 IVNS1ABPQ9Y6Y0 642 aa17.28■□□□□ 0.36
VCX3B-201ENST00000381029 KLRF2D3W0D1 207 aa17.27■□□□□ 0.36
VCX3B-201ENST00000381029 HMGCRP04035 888 aa17.27■□□□□ 0.36
VCX3B-201ENST00000381029 INHAP05111 366 aa17.27■□□□□ 0.36
VCX3B-201ENST00000381029 RPS6KB1P23443 525 aa17.27■□□□□ 0.36
VCX3B-201ENST00000381029 TKFCQ3LXA3 575 aa17.27■□□□□ 0.36
VCX3B-201ENST00000381029 MUM1L1Q5H9M0 696 aa17.27■□□□□ 0.36
VCX3B-201ENST00000381029 WDR78Q5VTH9 848 aa17.27■□□□□ 0.36
VCX3B-201ENST00000381029 CCDC174Q6PII3 467 aa17.27■□□□□ 0.36
VCX3B-201ENST00000381029 APOA5Q6Q788 366 aa17.27■□□□□ 0.36
VCX3B-201ENST00000381029 CATIPQ7Z7H3 387 aa17.27■□□□□ 0.36
VCX3B-201ENST00000381029 CLEC4DQ8WXI8 215 aa17.27■□□□□ 0.36
VCX3B-201ENST00000381029 TM6SF1Q9BZW5 370 aa17.27■□□□□ 0.36
VCX3B-201ENST00000381029 GTF3C3Q9Y5Q9 886 aa17.27■□□□□ 0.36
VCX3B-201ENST00000381029 PPP1R11O60927 126 aaPredicted RBP17.26■□□□□ 0.35
VCX3B-201ENST00000381029 MMP19Q99542 508 aa17.26■□□□□ 0.35
VCX3B-201ENST00000381029 A1CFQ9NQ94 594 aaKnown RBP17.26■□□□□ 0.35
VCX3B-201ENST00000381029 RNF146Q9NTX7 359 aa17.26■□□□□ 0.35
VCX3B-201ENST00000381029 DIS3Q9Y2L1 958 aaKnown RBP17.26■□□□□ 0.35
VCX3B-201ENST00000381029 ZNFX1Q9P2E3 1918 aaKnown RBP17.25■□□□□ 0.35
VCX3B-201ENST00000381029 PGK2P07205 417 aa17.25■□□□□ 0.35
VCX3B-201ENST00000381029 EVCP57679 992 aa17.25■□□□□ 0.35
VCX3B-201ENST00000381029 CDC37Q16543 378 aaPredicted RBP17.25■□□□□ 0.35
VCX3B-201ENST00000381029 QRICH1Q2TAL8 776 aa17.25■□□□□ 0.35
VCX3B-201ENST00000381029 OLFML2BQ68BL8 750 aa17.25■□□□□ 0.35
VCX3B-201ENST00000381029 BLOC1S2Q6QNY1 142 aa17.25■□□□□ 0.35
VCX3B-201ENST00000381029 TRMT44Q8IYL2 757 aaKnown RBP17.25■□□□□ 0.35
VCX3B-201ENST00000381029 FAM133AQ8N9E0 248 aa17.25■□□□□ 0.35
VCX3B-201ENST00000381029 MAML3Q96JK9 1138 aa17.25■□□□□ 0.35
VCX3B-201ENST00000381029 TRERF1Q96PN7 1200 aa17.25■□□□□ 0.35
VCX3B-201ENST00000381029 ACAD9Q9H845 621 aa17.25■□□□□ 0.35
VCX3B-201ENST00000381029 PAK6Q9NQU5 681 aaPredicted RBP17.25■□□□□ 0.35
VCX3B-201ENST00000381029 FAM217BQ9NTX9 383 aaPredicted RBP17.25■□□□□ 0.35
VCX3B-201ENST00000381029 FBXO40Q9UH90 709 aa17.25■□□□□ 0.35
VCX3B-201ENST00000381029 CCPG1Q9ULG6 757 aa17.25■□□□□ 0.35
VCX3B-201ENST00000381029 RBBP6Q7Z6E9 1792 aaKnown RBP17.25■□□□□ 0.35
VCX3B-201ENST00000381029 ASTN1O14525 1302 aa17.24■□□□□ 0.35
VCX3B-201ENST00000381029 POTEFA5A3E0 1075 aa17.24■□□□□ 0.35
VCX3B-201ENST00000381029 CCDC85CA6NKD9 419 aa17.24■□□□□ 0.35
VCX3B-201ENST00000381029 NFIBO00712 420 aa17.24■□□□□ 0.35
VCX3B-201ENST00000381029 ALAS1P13196 640 aa17.24■□□□□ 0.35
VCX3B-201ENST00000381029 RXRAP19793 462 aa17.24■□□□□ 0.35
VCX3B-201ENST00000381029 CASTP20810 708 aaKnown RBP17.24■□□□□ 0.35
VCX3B-201ENST00000381029 SMARCA1P28370 1054 aa17.24■□□□□ 0.35
VCX3B-201ENST00000381029 ANAPC15P60006 121 aa17.24■□□□□ 0.35
VCX3B-201ENST00000381029 CACNB2Q08289 660 aaPredicted RBP17.24■□□□□ 0.35
VCX3B-201ENST00000381029 KCTD2Q14681 263 aa17.24■□□□□ 0.35
VCX3B-201ENST00000381029 RUFY3Q7L099 469 aa17.24■□□□□ 0.35
VCX3B-201ENST00000381029 SPZ1Q9BXG8 430 aa17.24■□□□□ 0.35
VCX3B-201ENST00000381029 UNC93B1Q9H1C4 597 aa17.24■□□□□ 0.35
VCX3B-201ENST00000381029 CWC22Q9HCG8 908 aaKnown RBP17.24■□□□□ 0.35
VCX3B-201ENST00000381029 HOMER2Q9NSB8 354 aa17.24■□□□□ 0.35
VCX3B-201ENST00000381029 CTDP1Q9Y5B0 961 aaPredicted RBP17.24■□□□□ 0.35
VCX3B-201ENST00000381029 CCDC69A6NI79 296 aa17.23■□□□□ 0.35
VCX3B-201ENST00000381029 OPLAHO14841 1288 aa17.23■□□□□ 0.35
VCX3B-201ENST00000381029 PLEKHA8P1O95397 391 aa17.23■□□□□ 0.35
VCX3B-201ENST00000381029 CCL5P13501 91 aa17.23■□□□□ 0.35
VCX3B-201ENST00000381029 PSMA5P28066 241 aa17.23■□□□□ 0.35
VCX3B-201ENST00000381029 RGS19P49795 217 aa17.23■□□□□ 0.35
VCX3B-201ENST00000381029 RCAN1P53805 252 aa17.23■□□□□ 0.35
VCX3B-201ENST00000381029 FUT2Q10981 343 aa17.23■□□□□ 0.35
VCX3B-201ENST00000381029 TOB2Q14106 344 aaPredicted RBP17.23■□□□□ 0.35
VCX3B-201ENST00000381029 Q6ZUG5 572 aa17.23■□□□□ 0.35
VCX3B-201ENST00000381029 DPP9Q86TI2 863 aa17.23■□□□□ 0.35
VCX3B-201ENST00000381029 SRBD1Q8N5C6 995 aaKnown RBP17.23■□□□□ 0.35
VCX3B-201ENST00000381029 FANCBQ8NB91 859 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms