RNA–Protein interactions for RNA: ENST00000378505.6

RPGR-203, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 4,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-203ENST00000378505 RETREG2Q8NC44 543 aa12.46□□□□□ -0.41
RPGR-203ENST00000378505 GOLGA5Q8TBA6 731 aa12.46□□□□□ -0.41
RPGR-203ENST00000378505 U2AF1L4Q8WU68 220 aaKnown RBP12.46□□□□□ -0.41
RPGR-203ENST00000378505 GDAP1L1Q96MZ0 367 aa12.46□□□□□ -0.41
RPGR-203ENST00000378505 AGTPBP1Q9UPW5 1226 aa12.46□□□□□ -0.41
RPGR-203ENST00000378505 PCDHA1Q9Y5I3 950 aa12.46□□□□□ -0.41
RPGR-203ENST00000378505 SOS2Q07890 1332 aaPredicted RBP12.46□□□□□ -0.42
RPGR-203ENST00000378505 ASPRV1Q53RT3 343 aa12.46□□□□□ -0.42
RPGR-203ENST00000378505 SLFN13Q68D06 897 aa12.46□□□□□ -0.42
RPGR-203ENST00000378505 RDH13Q8NBN7 331 aa12.46□□□□□ -0.42
RPGR-203ENST00000378505 KIFC2Q96AC6 838 aa12.46□□□□□ -0.42
RPGR-203ENST00000378505 CNOT6LQ96LI5 555 aaKnown RBP12.46□□□□□ -0.42
RPGR-203ENST00000378505 LARSQ9P2J5 1176 aaKnown RBP12.46□□□□□ -0.42
RPGR-203ENST00000378505 FEZ2Q9UHY8 353 aaPredicted RBP12.46□□□□□ -0.42
RPGR-203ENST00000378505 RPAP1Q9BWH6 1393 aaPredicted RBP12.45□□□□□ -0.42
RPGR-203ENST00000378505 H2AFZP0C0S5 128 aa12.45□□□□□ -0.42
RPGR-203ENST00000378505 MAP3K9P80192 1104 aa12.45□□□□□ -0.42
RPGR-203ENST00000378505 ICA1Q05084 483 aa12.45□□□□□ -0.42
RPGR-203ENST00000378505 ADAM9Q13443 819 aa12.45□□□□□ -0.42
RPGR-203ENST00000378505 H2AFVQ71UI9 128 aa12.45□□□□□ -0.42
RPGR-203ENST00000378505 APBB1IPQ7Z5R6 666 aaPredicted RBP12.45□□□□□ -0.42
RPGR-203ENST00000378505 SRGAP1Q7Z6B7 1085 aa12.45□□□□□ -0.42
RPGR-203ENST00000378505 EEF2KMTQ96G04 330 aa12.45□□□□□ -0.42
RPGR-203ENST00000378505 RAB17Q9H0T7 212 aa12.45□□□□□ -0.42
RPGR-203ENST00000378505 NT5C2P49902 561 aa12.45□□□□□ -0.42
RPGR-203ENST00000378505 CCDC105Q8IYK2 499 aa12.45□□□□□ -0.42
RPGR-203ENST00000378505 ALKQ9UM73 1620 aa12.45□□□□□ -0.42
RPGR-203ENST00000378505 PPIP5K2O43314 1243 aa12.45□□□□□ -0.42
RPGR-203ENST00000378505 MCAMP43121 646 aa12.45□□□□□ -0.42
RPGR-203ENST00000378505 POLR2FP61218 127 aaKnown RBP12.45□□□□□ -0.42
RPGR-203ENST00000378505 KRT71Q3SY84 523 aa12.45□□□□□ -0.42
RPGR-203ENST00000378505 KIAA0825Q8IV33 1275 aa12.45□□□□□ -0.42
RPGR-203ENST00000378505 RASGRP4Q8TDF6 673 aa12.45□□□□□ -0.42
RPGR-203ENST00000378505 KIF2CQ99661 725 aa12.45□□□□□ -0.42
RPGR-203ENST00000378505 MRPL11Q9Y3B7 192 aaKnown RBP12.45□□□□□ -0.42
RPGR-203ENST00000378505 GJA3Q9Y6H8 435 aa12.45□□□□□ -0.42
RPGR-203ENST00000378505 RFX7Q2KHR2 1363 aa12.45□□□□□ -0.42
RPGR-203ENST00000378505 LRRC7Q96NW7 1537 aa12.45□□□□□ -0.42
RPGR-203ENST00000378505 INPP5BP32019 993 aa12.45□□□□□ -0.42
RPGR-203ENST00000378505 SCNN1DP51172 638 aa12.45□□□□□ -0.42
RPGR-203ENST00000378505 CYP2J2P51589 502 aa12.45□□□□□ -0.42
RPGR-203ENST00000378505 MIER3Q7Z3K6 550 aa12.45□□□□□ -0.42
RPGR-203ENST00000378505 NLRX1Q86UT6 975 aa12.45□□□□□ -0.42
RPGR-203ENST00000378505 VSTM4Q8IW00 320 aa12.45□□□□□ -0.42
RPGR-203ENST00000378505 FAM178BQ8IXR5 827 aa12.45□□□□□ -0.42
RPGR-203ENST00000378505 LARP4BQ92615 738 aaKnown RBP12.45□□□□□ -0.42
RPGR-203ENST00000378505 ZDHHC9Q9Y397 364 aa12.45□□□□□ -0.42
RPGR-203ENST00000378505 USP31Q70CQ4 1352 aa12.44□□□□□ -0.42
RPGR-203ENST00000378505 ZNF658Q5TYW1 1059 aaPredicted RBP12.44□□□□□ -0.42
RPGR-203ENST00000378505 SARM1Q6SZW1 724 aa12.44□□□□□ -0.42
RPGR-203ENST00000378505 POTEDQ86YR6 584 aa12.44□□□□□ -0.42
RPGR-203ENST00000378505 GRAMD1CQ8IYS0 662 aa12.44□□□□□ -0.42
RPGR-203ENST00000378505 MAIP1Q8WWC4 291 aa12.44□□□□□ -0.42
RPGR-203ENST00000378505 ABCC12Q96J65 1359 aa12.44□□□□□ -0.42
RPGR-203ENST00000378505 KCNK3O14649 394 aa12.44□□□□□ -0.42
RPGR-203ENST00000378505 DCUN1D2Q6PH85 259 aa12.44□□□□□ -0.42
RPGR-203ENST00000378505 SMYD4Q8IYR2 804 aaPredicted RBP12.44□□□□□ -0.42
RPGR-203ENST00000378505 SLC35F6Q8N357 371 aa12.44□□□□□ -0.42
RPGR-203ENST00000378505 P2RX5Q93086 422 aa12.44□□□□□ -0.42
RPGR-203ENST00000378505 CABS1Q96KC9 395 aa12.44□□□□□ -0.42
RPGR-203ENST00000378505 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.44□□□□□ -0.42
RPGR-203ENST00000378505 PCDHB6Q9Y5E3 794 aa12.44□□□□□ -0.42
RPGR-203ENST00000378505 PHLPP2Q6ZVD8 1323 aa12.44□□□□□ -0.42
RPGR-203ENST00000378505 GAS8O95995 478 aa12.44□□□□□ -0.42
RPGR-203ENST00000378505 ERFEQ4G0M1 354 aa12.44□□□□□ -0.42
RPGR-203ENST00000378505 INTS8Q75QN2 995 aaKnown RBP12.44□□□□□ -0.42
RPGR-203ENST00000378505 TAOK1Q7L7X3 1001 aa12.44□□□□□ -0.42
RPGR-203ENST00000378505 AMNQ9BXJ7 453 aa12.44□□□□□ -0.42
RPGR-203ENST00000378505 SETBP1Q9Y6X0 1596 aa12.44□□□□□ -0.42
RPGR-203ENST00000378505 ATP8B1O43520 1251 aa12.43□□□□□ -0.42
RPGR-203ENST00000378505 POLR2MP0CAP2 368 aa12.43□□□□□ -0.42
RPGR-203ENST00000378505 GCFC2P16383 781 aaKnown RBP12.43□□□□□ -0.42
RPGR-203ENST00000378505 PAXIP1Q6ZW49 1069 aaPredicted RBP12.43□□□□□ -0.42
RPGR-203ENST00000378505 FLAD1Q8NFF5 587 aa12.43□□□□□ -0.42
RPGR-203ENST00000378505 AXIN2Q9Y2T1 843 aa12.43□□□□□ -0.42
RPGR-203ENST00000378505 RBL2Q08999 1139 aa12.43□□□□□ -0.42
RPGR-203ENST00000378505 LONRF2Q1L5Z9 754 aa12.43□□□□□ -0.42
RPGR-203ENST00000378505 OTUD6AQ7L8S5 288 aa12.43□□□□□ -0.42
RPGR-203ENST00000378505 PGBD1Q96JS3 809 aa12.43□□□□□ -0.42
RPGR-203ENST00000378505 MED4Q9NPJ6 270 aa12.43□□□□□ -0.42
RPGR-203ENST00000378505 FAM169AQ9Y6X4 670 aa12.43□□□□□ -0.42
RPGR-203ENST00000378505 NOP56O00567 594 aaKnown RBP12.43□□□□□ -0.42
RPGR-203ENST00000378505 ZSCAN26Q16670 478 aa12.43□□□□□ -0.42
RPGR-203ENST00000378505 CDAN1Q8IWY9 1227 aa12.43□□□□□ -0.42
RPGR-203ENST00000378505 SAMSN1Q9NSI8 373 aaKnown RBP12.43□□□□□ -0.42
RPGR-203ENST00000378505 STK17AQ9UEE5 414 aa12.43□□□□□ -0.42
RPGR-203ENST00000378505 LAMC1P11047 1609 aa12.43□□□□□ -0.42
RPGR-203ENST00000378505 N4BP1O75113 896 aaKnown RBP12.43□□□□□ -0.42
RPGR-203ENST00000378505 BBOX1O75936 387 aa12.43□□□□□ -0.42
RPGR-203ENST00000378505 ABCB4P21439 1286 aa12.43□□□□□ -0.42
RPGR-203ENST00000378505 FKBP3Q00688 224 aaKnown RBP12.43□□□□□ -0.42
RPGR-203ENST00000378505 DOK7Q18PE1 504 aa12.43□□□□□ -0.42
RPGR-203ENST00000378505 SUSD4Q5VX71 490 aa12.43□□□□□ -0.42
RPGR-203ENST00000378505 NIM1KQ8IY84 436 aa12.43□□□□□ -0.42
RPGR-203ENST00000378505 ANKRD13CQ8N6S4 541 aa12.43□□□□□ -0.42
RPGR-203ENST00000378505 RIC8AQ9NPQ8 531 aa12.43□□□□□ -0.42
RPGR-203ENST00000378505 SPTLC3Q9NUV7 552 aa12.43□□□□□ -0.42
RPGR-203ENST00000378505 PODXL2Q9NZ53 605 aa12.43□□□□□ -0.42
RPGR-203ENST00000378505 PARP2Q9UGN5 583 aa12.43□□□□□ -0.42
RPGR-203ENST00000378505 KIAA1024Q9UPX6 916 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms