RNA–Protein interactions for RNA: ENST00000378387.3

ARHGEF39-201, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARHGEF39, Length 3,769 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-201ENST00000378387 CTDSPL2Q05D32 466 aa11.66□□□□□ -0.54
ARHGEF39-201ENST00000378387 KIF2BQ8N4N8 673 aa11.66□□□□□ -0.54
ARHGEF39-201ENST00000378387 AENQ8WTP8 325 aaKnown RBP11.66□□□□□ -0.54
ARHGEF39-201ENST00000378387 NEDD4P46934 1319 aa11.66□□□□□ -0.54
ARHGEF39-201ENST00000378387 DEPDC5O75140 1603 aa11.66□□□□□ -0.54
ARHGEF39-201ENST00000378387 CAMSAP1Q5T5Y3 1602 aa11.66□□□□□ -0.54
ARHGEF39-201ENST00000378387 FAM205CA6NFA0 338 aa11.66□□□□□ -0.54
ARHGEF39-201ENST00000378387 HMGB1P1B2RPK0 211 aaPredicted RBP11.66□□□□□ -0.54
ARHGEF39-201ENST00000378387 HERVK_113P62684 666 aa11.66□□□□□ -0.54
ARHGEF39-201ENST00000378387 TMC4Q7Z404 712 aa11.66□□□□□ -0.54
ARHGEF39-201ENST00000378387 DDX42Q86XP3 938 aaKnown RBP eCLIP11.66□□□□□ -0.54
ARHGEF39-201ENST00000378387 KLHL29Q96CT2 875 aa11.66□□□□□ -0.54
ARHGEF39-201ENST00000378387 MED15Q96RN5 788 aa11.66□□□□□ -0.54
ARHGEF39-201ENST00000378387 PUS7LQ9H0K6 701 aaKnown RBP11.66□□□□□ -0.54
ARHGEF39-201ENST00000378387 A1CFQ9NQ94 594 aaKnown RBP11.66□□□□□ -0.54
ARHGEF39-201ENST00000378387 TBC1D2BQ9UPU7 963 aa11.66□□□□□ -0.54
ARHGEF39-201ENST00000378387 NEURL1BA8MQ27 555 aa11.66□□□□□ -0.54
ARHGEF39-201ENST00000378387 PLEKP08567 350 aaPredicted RBP11.66□□□□□ -0.54
ARHGEF39-201ENST00000378387 EPS15P42566 896 aa11.66□□□□□ -0.54
ARHGEF39-201ENST00000378387 SESN3P58005 492 aa11.66□□□□□ -0.54
ARHGEF39-201ENST00000378387 ATP11AP98196 1134 aa11.66□□□□□ -0.54
ARHGEF39-201ENST00000378387 TOM1L2Q6ZVM7 507 aa11.66□□□□□ -0.54
ARHGEF39-201ENST00000378387 ADAT2Q7Z6V5 191 aaKnown RBP11.66□□□□□ -0.54
ARHGEF39-201ENST00000378387 KAZALD1Q96I82 304 aa11.66□□□□□ -0.54
ARHGEF39-201ENST00000378387 NOX5Q96PH1 765 aa11.66□□□□□ -0.54
ARHGEF39-201ENST00000378387 GSDMAQ96QA5 445 aa11.66□□□□□ -0.54
ARHGEF39-201ENST00000378387 TSGA10Q9BZW7 698 aa11.66□□□□□ -0.54
ARHGEF39-201ENST00000378387 ATP6V0A4Q9HBG4 840 aa11.66□□□□□ -0.54
ARHGEF39-201ENST00000378387 ETAA1Q9NY74 926 aa11.66□□□□□ -0.54
ARHGEF39-201ENST00000378387 CAPN6Q9Y6Q1 641 aa11.66□□□□□ -0.54
ARHGEF39-201ENST00000378387 VWDEQ8N2E2 1590 aa11.65□□□□□ -0.54
ARHGEF39-201ENST00000378387 RCCD1A6NED2 376 aa11.65□□□□□ -0.54
ARHGEF39-201ENST00000378387 GLI1P08151 1106 aa11.65□□□□□ -0.54
ARHGEF39-201ENST00000378387 UBA7P41226 1012 aa11.65□□□□□ -0.54
ARHGEF39-201ENST00000378387 ZAP70P43403 619 aa11.65□□□□□ -0.54
ARHGEF39-201ENST00000378387 TNNC1P63316 161 aa11.65□□□□□ -0.54
ARHGEF39-201ENST00000378387 CUL4BQ13620 913 aa11.65□□□□□ -0.54
ARHGEF39-201ENST00000378387 WTAPQ15007 396 aa11.65□□□□□ -0.54
ARHGEF39-201ENST00000378387 LRRC24Q50LG9 513 aa11.65□□□□□ -0.54
ARHGEF39-201ENST00000378387 SOGA3Q5TF21 947 aa11.65□□□□□ -0.54
ARHGEF39-201ENST00000378387 SLC30A9Q6PML9 568 aa11.65□□□□□ -0.54
ARHGEF39-201ENST00000378387 MB21D1Q8N884 522 aa11.65□□□□□ -0.54
ARHGEF39-201ENST00000378387 ZNF483Q8TF39 744 aaPredicted RBP11.65□□□□□ -0.54
ARHGEF39-201ENST00000378387 PAIP2Q9BPZ3 127 aaKnown RBP11.65□□□□□ -0.54
ARHGEF39-201ENST00000378387 TRPC6Q9Y210 931 aa11.65□□□□□ -0.54
ARHGEF39-201ENST00000378387 ADGRB1O14514 1584 aa11.65□□□□□ -0.54
ARHGEF39-201ENST00000378387 SNUPNO95149 360 aaKnown RBP11.65□□□□□ -0.54
ARHGEF39-201ENST00000378387 FNBP4Q8N3X1 1017 aaPredicted RBP11.65□□□□□ -0.54
ARHGEF39-201ENST00000378387 TUBGCP2Q9BSJ2 902 aa11.65□□□□□ -0.54
ARHGEF39-201ENST00000378387 LUC7LQ9NQ29 371 aaKnown RBP11.65□□□□□ -0.54
ARHGEF39-201ENST00000378387 SALL1Q9NSC2 1324 aa11.65□□□□□ -0.54
ARHGEF39-201ENST00000378387 MAP2P11137 1827 aaKnown RBP11.65□□□□□ -0.54
ARHGEF39-201ENST00000378387 LRRD1A4D1F6 860 aa11.65□□□□□ -0.55
ARHGEF39-201ENST00000378387 ZNF233A6NK53 670 aa11.65□□□□□ -0.55
ARHGEF39-201ENST00000378387 KCNK3O14649 394 aa11.65□□□□□ -0.55
ARHGEF39-201ENST00000378387 NLRP5P59047 1200 aa11.65□□□□□ -0.55
ARHGEF39-201ENST00000378387 NBPF9Q3BBW0 867 aa11.65□□□□□ -0.55
ARHGEF39-201ENST00000378387 ANKRD20A8PQ5CZ79 823 aa11.65□□□□□ -0.55
ARHGEF39-201ENST00000378387 KDM7AQ6ZMT4 941 aa11.65□□□□□ -0.55
ARHGEF39-201ENST00000378387 ZBTB3Q9H5J0 574 aa11.65□□□□□ -0.55
ARHGEF39-201ENST00000378387 FBXO2Q9UK22 296 aaPredicted RBP11.65□□□□□ -0.55
ARHGEF39-201ENST00000378387 REXO2Q9Y3B8 237 aaKnown RBP11.65□□□□□ -0.55
ARHGEF39-201ENST00000378387 TET3O43151 1660 aa11.64□□□□□ -0.55
ARHGEF39-201ENST00000378387 H0Y3Z8 333 aa11.64□□□□□ -0.55
ARHGEF39-201ENST00000378387 ATP6V1G2O95670 118 aa11.64□□□□□ -0.55
ARHGEF39-201ENST00000378387 IGKV5-2P06315 115 aa11.64□□□□□ -0.55
ARHGEF39-201ENST00000378387 EIF4A3P38919 411 aaKnown RBP11.64□□□□□ -0.55
ARHGEF39-201ENST00000378387 RBM5P52756 815 aaKnown RBP eCLIP11.64□□□□□ -0.55
ARHGEF39-201ENST00000378387 QPCTQ16769 361 aa11.64□□□□□ -0.55
ARHGEF39-201ENST00000378387 PAPD7Q5XG87 772 aaKnown RBP11.64□□□□□ -0.55
ARHGEF39-201ENST00000378387 LRRC45Q96CN5 670 aa11.64□□□□□ -0.55
ARHGEF39-201ENST00000378387 AP1M1Q9BXS5 423 aa11.64□□□□□ -0.55
ARHGEF39-201ENST00000378387 RMND1Q9NWS8 449 aa11.64□□□□□ -0.55
ARHGEF39-201ENST00000378387 ABCF2Q9UG63 623 aa11.64□□□□□ -0.55
ARHGEF39-201ENST00000378387 LEMD3Q9Y2U8 911 aa11.64□□□□□ -0.55
ARHGEF39-201ENST00000378387 RASSF9O75901 435 aa11.64□□□□□ -0.55
ARHGEF39-201ENST00000378387 HOXC9P31274 260 aa11.64□□□□□ -0.55
ARHGEF39-201ENST00000378387 TRADDQ15628 312 aa11.64□□□□□ -0.55
ARHGEF39-201ENST00000378387 MAP3K14Q99558 947 aa11.64□□□□□ -0.55
ARHGEF39-201ENST00000378387 OSBPL7Q9BZF2 842 aa11.64□□□□□ -0.55
ARHGEF39-201ENST00000378387 DDX21Q9NR30 783 aaKnown RBP eCLIP11.64□□□□□ -0.55
ARHGEF39-201ENST00000378387 EXOC1Q9NV70 894 aa11.64□□□□□ -0.55
ARHGEF39-201ENST00000378387 ATP8A1Q9Y2Q0 1164 aa11.64□□□□□ -0.55
ARHGEF39-201ENST00000378387 PCDHA13Q9Y5I0 950 aa11.64□□□□□ -0.55
ARHGEF39-201ENST00000378387 V9GY48 417 aaPredicted RBP11.64□□□□□ -0.55
ARHGEF39-201ENST00000378387 SLCO1A2P46721 670 aa11.64□□□□□ -0.55
ARHGEF39-201ENST00000378387 CEBPAP49715 358 aaPredicted RBP11.64□□□□□ -0.55
ARHGEF39-201ENST00000378387 ANTXR2P58335 489 aa11.64□□□□□ -0.55
ARHGEF39-201ENST00000378387 SKOR1P84550 965 aa11.64□□□□□ -0.55
ARHGEF39-201ENST00000378387 CCDC6Q16204 474 aa11.64□□□□□ -0.55
ARHGEF39-201ENST00000378387 MFSD6Q6ZSS7 791 aa11.64□□□□□ -0.55
ARHGEF39-201ENST00000378387 CYB5R4Q7L1T6 521 aa11.64□□□□□ -0.55
ARHGEF39-201ENST00000378387 KCNK9Q9NPC2 374 aa11.64□□□□□ -0.55
ARHGEF39-201ENST00000378387 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.64□□□□□ -0.55
ARHGEF39-201ENST00000378387 SWAP70Q9UH65 585 aa11.64□□□□□ -0.55
ARHGEF39-201ENST00000378387 SRPRBQ9Y5M8 271 aaKnown RBP11.64□□□□□ -0.55
ARHGEF39-201ENST00000378387 PRR36Q9H6K5 1346 aa11.64□□□□□ -0.55
ARHGEF39-201ENST00000378387 HIP1RO75146 1068 aa11.63□□□□□ -0.55
ARHGEF39-201ENST00000378387 PRCPP42785 496 aa11.63□□□□□ -0.55
ARHGEF39-201ENST00000378387 PTGDRQ13258 359 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms