RNA–Protein interactions for RNA: ENST00000378371.6

ARHGEF16-201, Transcript of Rho guanine nucleotide exchange factor 16, humanhuman

TSL 1 (best) BASIC

Gene ARHGEF16, Length 2,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF16-201ENST00000378371 GTF2A1P52655 376 aaPredicted RBP17.13■□□□□ 0.33
ARHGEF16-201ENST00000378371 TROAPQ12815 778 aa17.13■□□□□ 0.33
ARHGEF16-201ENST00000378371 RUBCNQ92622 972 aa17.13■□□□□ 0.33
ARHGEF16-201ENST00000378371 LACRTQ9GZZ8 138 aa17.13■□□□□ 0.33
ARHGEF16-201ENST00000378371 KAT14Q9H8E8 782 aa17.13■□□□□ 0.33
ARHGEF16-201ENST00000378371 TRMT112Q9UI30 125 aaKnown RBP17.13■□□□□ 0.33
ARHGEF16-201ENST00000378371 FAM184BQ9ULE4 1060 aa17.13■□□□□ 0.33
ARHGEF16-201ENST00000378371 MAPK8IP1Q9UQF2 711 aa17.13■□□□□ 0.33
ARHGEF16-201ENST00000378371 SRGNP10124 158 aa17.12■□□□□ 0.33
ARHGEF16-201ENST00000378371 PMS1P54277 932 aaKnown RBP17.12■□□□□ 0.33
ARHGEF16-201ENST00000378371 TSR1Q2NL82 804 aaKnown RBP17.12■□□□□ 0.33
ARHGEF16-201ENST00000378371 IQCEQ6IPM2 695 aa17.12■□□□□ 0.33
ARHGEF16-201ENST00000378371 ZNF572Q7Z3I7 529 aaPredicted RBP17.12■□□□□ 0.33
ARHGEF16-201ENST00000378371 CATIPQ7Z7H3 387 aa17.12■□□□□ 0.33
ARHGEF16-201ENST00000378371 GDAP1L1Q96MZ0 367 aa17.12■□□□□ 0.33
ARHGEF16-201ENST00000378371 GOLGA6CA6NDK9 693 aa17.12■□□□□ 0.33
ARHGEF16-201ENST00000378371 GOLGA6DP0CG33 693 aa17.12■□□□□ 0.33
ARHGEF16-201ENST00000378371 CALM1P0DP23 149 aa17.12■□□□□ 0.33
ARHGEF16-201ENST00000378371 CALM2P0DP24 149 aa17.12■□□□□ 0.33
ARHGEF16-201ENST00000378371 CALM3P0DP25 149 aa17.12■□□□□ 0.33
ARHGEF16-201ENST00000378371 GUCY2CP25092 1073 aa17.12■□□□□ 0.33
ARHGEF16-201ENST00000378371 ARL6IP4Q66PJ3 421 aaKnown RBP17.12■□□□□ 0.33
ARHGEF16-201ENST00000378371 SUGP1Q8IWZ8 645 aaKnown RBP17.12■□□□□ 0.33
ARHGEF16-201ENST00000378371 CCDC170Q8IYT3 715 aa17.12■□□□□ 0.33
ARHGEF16-201ENST00000378371 FNBP4Q8N3X1 1017 aaPredicted RBP17.12■□□□□ 0.33
ARHGEF16-201ENST00000378371 MMGT1Q8N4V1 131 aa17.12■□□□□ 0.33
ARHGEF16-201ENST00000378371 MARCH10Q8NA82 808 aaPredicted RBP17.12■□□□□ 0.33
ARHGEF16-201ENST00000378371 GOLGA6AQ9NYA3 693 aa17.12■□□□□ 0.33
ARHGEF16-201ENST00000378371 GOLGA6BA6NDN3 693 aa17.11■□□□□ 0.33
ARHGEF16-201ENST00000378371 ZNF185O15231 689 aa17.11■□□□□ 0.33
ARHGEF16-201ENST00000378371 DDAH1O94760 285 aa17.11■□□□□ 0.33
ARHGEF16-201ENST00000378371 LONP1P36776 959 aaKnown RBP17.11■□□□□ 0.33
ARHGEF16-201ENST00000378371 DNM2P50570 870 aa17.11■□□□□ 0.33
ARHGEF16-201ENST00000378371 C2orf54Q08AI8 447 aa17.11■□□□□ 0.33
ARHGEF16-201ENST00000378371 PPFIA1Q13136 1202 aa17.11■□□□□ 0.33
ARHGEF16-201ENST00000378371 KCNB1Q14721 858 aa17.11■□□□□ 0.33
ARHGEF16-201ENST00000378371 IFIT1BQ5T764 474 aaKnown RBP17.11■□□□□ 0.33
ARHGEF16-201ENST00000378371 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.11■□□□□ 0.33
ARHGEF16-201ENST00000378371 CAGE1Q8TC20 777 aa17.11■□□□□ 0.33
ARHGEF16-201ENST00000378371 RASSF10A6NK89 507 aa17.11■□□□□ 0.33
ARHGEF16-201ENST00000378371 MINDY4BA8MYZ0 360 aa17.11■□□□□ 0.33
ARHGEF16-201ENST00000378371 SMIM22K7EJ46 135 aa17.11■□□□□ 0.33
ARHGEF16-201ENST00000378371 SNAP23O00161 211 aa17.11■□□□□ 0.33
ARHGEF16-201ENST00000378371 IRAK1P51617 712 aa17.11■□□□□ 0.33
ARHGEF16-201ENST00000378371 ITIH3Q06033 890 aa17.11■□□□□ 0.33
ARHGEF16-201ENST00000378371 PIK3AP1Q6ZUJ8 805 aa17.11■□□□□ 0.33
ARHGEF16-201ENST00000378371 ADGRA1Q86SQ6 560 aa17.11■□□□□ 0.33
ARHGEF16-201ENST00000378371 AMOTL1Q8IY63 956 aa17.11■□□□□ 0.33
ARHGEF16-201ENST00000378371 C4orf32Q8N8J7 132 aa17.11■□□□□ 0.33
ARHGEF16-201ENST00000378371 SDR42E1Q8WUS8 393 aa17.11■□□□□ 0.33
ARHGEF16-201ENST00000378371 SH3GL2Q99962 352 aa17.11■□□□□ 0.33
ARHGEF16-201ENST00000378371 NHEJ1Q9H9Q4 299 aaPredicted RBP17.11■□□□□ 0.33
ARHGEF16-201ENST00000378371 GRIN2DO15399 1336 aa17.1■□□□□ 0.33
ARHGEF16-201ENST00000378371 COL5A3P25940 1745 aaPredicted RBP17.1■□□□□ 0.33
ARHGEF16-201ENST00000378371 IDEP14735 1019 aa17.1■□□□□ 0.33
ARHGEF16-201ENST00000378371 MCM7P33993 719 aa17.1■□□□□ 0.33
ARHGEF16-201ENST00000378371 STAT6P42226 847 aa17.1■□□□□ 0.33
ARHGEF16-201ENST00000378371 IRX3P78415 501 aaPredicted RBP17.1■□□□□ 0.33
ARHGEF16-201ENST00000378371 RETREG2Q8NC44 543 aa17.1■□□□□ 0.33
ARHGEF16-201ENST00000378371 NOC3LQ8WTT2 800 aaKnown RBP17.1■□□□□ 0.33
ARHGEF16-201ENST00000378371 NUP58Q9BVL2 599 aa17.1■□□□□ 0.33
ARHGEF16-201ENST00000378371 KLRC4O43908 158 aa17.09■□□□□ 0.33
ARHGEF16-201ENST00000378371 CDK17Q00537 523 aa17.09■□□□□ 0.33
ARHGEF16-201ENST00000378371 NAALADL2Q58DX5 795 aa17.09■□□□□ 0.33
ARHGEF16-201ENST00000378371 TTI2Q6NXR4 508 aa17.09■□□□□ 0.33
ARHGEF16-201ENST00000378371 GBP6Q6ZN66 633 aa17.09■□□□□ 0.33
ARHGEF16-201ENST00000378371 DZIP3Q86Y13 1208 aaKnown RBP17.09■□□□□ 0.33
ARHGEF16-201ENST00000378371 DISC1Q9NRI5 854 aa17.09■□□□□ 0.33
ARHGEF16-201ENST00000378371 AGPAT5Q9NUQ2 364 aa17.09■□□□□ 0.33
ARHGEF16-201ENST00000378371 EXOC1Q9NV70 894 aa17.09■□□□□ 0.33
ARHGEF16-201ENST00000378371 NUTM2BA6NNL0 878 aaPredicted RBP17.09■□□□□ 0.33
ARHGEF16-201ENST00000378371 NUTM2EB1AL46 878 aaPredicted RBP17.09■□□□□ 0.33
ARHGEF16-201ENST00000378371 B4DLN1 442 aa17.09■□□□□ 0.33
ARHGEF16-201ENST00000378371 FGRP09769 529 aa17.09■□□□□ 0.33
ARHGEF16-201ENST00000378371 VAV2P52735 878 aa17.09■□□□□ 0.33
ARHGEF16-201ENST00000378371 ZBED6P86452 979 aa17.09■□□□□ 0.33
ARHGEF16-201ENST00000378371 SEMA3FQ13275 785 aa17.09■□□□□ 0.33
ARHGEF16-201ENST00000378371 CREG2Q8IUH2 290 aa17.09■□□□□ 0.33
ARHGEF16-201ENST00000378371 TRIM47Q96LD4 638 aa17.09■□□□□ 0.33
ARHGEF16-201ENST00000378371 SNX12Q9UMY4 172 aa17.09■□□□□ 0.33
ARHGEF16-201ENST00000378371 GOLGA8KD6RF30 607 aa17.08■□□□□ 0.33
ARHGEF16-201ENST00000378371 ADAMTS3O15072 1205 aa17.08■□□□□ 0.33
ARHGEF16-201ENST00000378371 CYP7A1P22680 504 aa17.08■□□□□ 0.33
ARHGEF16-201ENST00000378371 CCT5P48643 541 aa17.08■□□□□ 0.33
ARHGEF16-201ENST00000378371 MMS22LQ6ZRQ5 1243 aa17.08■□□□□ 0.33
ARHGEF16-201ENST00000378371 ZNF34Q8IZ26 560 aa17.08■□□□□ 0.33
ARHGEF16-201ENST00000378371 SRBD1Q8N5C6 995 aaKnown RBP17.08■□□□□ 0.33
ARHGEF16-201ENST00000378371 SECISBP2LQ93073 1101 aaKnown RBP17.08■□□□□ 0.33
ARHGEF16-201ENST00000378371 TSGA10Q9BZW7 698 aa17.08■□□□□ 0.33
ARHGEF16-201ENST00000378371 CCDC87Q9NVE4 849 aa17.08■□□□□ 0.33
ARHGEF16-201ENST00000378371 ZNHIT6Q9NWK9 470 aaKnown RBP17.08■□□□□ 0.33
ARHGEF16-201ENST00000378371 MAGEC2Q9UBF1 373 aaPredicted RBP17.08■□□□□ 0.33
ARHGEF16-201ENST00000378371 MYH14Q7Z406 1995 aaKnown RBP17.08■□□□□ 0.32
ARHGEF16-201ENST00000378371 CACNA1SQ13698 1873 aa17.08■□□□□ 0.32
ARHGEF16-201ENST00000378371 EIF3HO15372 352 aaKnown RBP eCLIP17.08■□□□□ 0.325e-6■□□□□ 8.9
ARHGEF16-201ENST00000378371 RHOBTB3O94955 611 aa17.08■□□□□ 0.32
ARHGEF16-201ENST00000378371 IPO7O95373 1038 aaKnown RBP17.08■□□□□ 0.32
ARHGEF16-201ENST00000378371 SCG2P13521 617 aa17.08■□□□□ 0.32
ARHGEF16-201ENST00000378371 BCAMP50895 628 aa17.08■□□□□ 0.32
ARHGEF16-201ENST00000378371 SF3B2Q13435 895 aaKnown RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms