RNA–Protein interactions for RNA: ENST00000378362.3

GFRA3-202, Transcript of GDNF family receptor alpha 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GFRA3, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3-202ENST00000378362 FCER1AP12319 257 aa25.61■■□□□ 1.69
GFRA3-202ENST00000378362 ALAS1P13196 640 aa25.61■■□□□ 1.69
GFRA3-202ENST00000378362 USP26Q9BXU7 913 aa25.61■■□□□ 1.69
GFRA3-202ENST00000378362 UNC93B1Q9H1C4 597 aa25.61■■□□□ 1.69
GFRA3-202ENST00000378362 SH2B2O14492 632 aaPredicted RBP25.6■■□□□ 1.69
GFRA3-202ENST00000378362 PXYLP1Q8TE99 480 aa25.6■■□□□ 1.69
GFRA3-202ENST00000378362 MAD2L2Q9UI95 211 aa25.6■■□□□ 1.69
GFRA3-202ENST00000378362 DHX16O60231 1041 aaKnown RBP25.6■■□□□ 1.69
GFRA3-202ENST00000378362 SEC24BO95487 1268 aa25.6■■□□□ 1.69
GFRA3-202ENST00000378362 NFXL1Q6ZNB6 911 aa25.6■■□□□ 1.69
GFRA3-202ENST00000378362 CCDC144CPQ8IYA2 1237 aa25.6■■□□□ 1.69
GFRA3-202ENST00000378362 ADGRF4Q8IZF3 695 aa25.6■■□□□ 1.69
GFRA3-202ENST00000378362 JAKMIP1Q96N16 626 aaKnown RBP25.6■■□□□ 1.69
GFRA3-202ENST00000378362 RANBP17Q9H2T7 1088 aaKnown RBP25.6■■□□□ 1.69
GFRA3-202ENST00000378362 ATP2A1O14983 1001 aa25.59■■□□□ 1.69
GFRA3-202ENST00000378362 STRNO43815 780 aa25.59■■□□□ 1.69
GFRA3-202ENST00000378362 CCL5P13501 91 aa25.59■■□□□ 1.69
GFRA3-202ENST00000378362 MUM1L1Q5H9M0 696 aa25.59■■□□□ 1.69
GFRA3-202ENST00000378362 GPATCH4Q5T3I0 446 aaKnown RBP25.59■■□□□ 1.69
GFRA3-202ENST00000378362 APBA2Q99767 749 aa25.59■■□□□ 1.69
GFRA3-202ENST00000378362 RNF208Q9H0X6 261 aa25.59■■□□□ 1.69
GFRA3-202ENST00000378362 CCPG1Q9ULG6 757 aa25.59■■□□□ 1.69
GFRA3-202ENST00000378362 CYP2C19P33261 490 aa25.58■■□□□ 1.69
GFRA3-202ENST00000378362 TROAPQ12815 778 aa25.58■■□□□ 1.69
GFRA3-202ENST00000378362 KCTD2Q14681 263 aa25.58■■□□□ 1.69
GFRA3-202ENST00000378362 SLC35G1Q2M3R5 365 aa25.58■■□□□ 1.69
GFRA3-202ENST00000378362 TSGA10IPQ3SY00 556 aa25.58■■□□□ 1.69
GFRA3-202ENST00000378362 TRERF1Q96PN7 1200 aa25.58■■□□□ 1.69
GFRA3-202ENST00000378362 KLRF2D3W0D1 207 aa25.58■■□□□ 1.68
GFRA3-202ENST00000378362 EN2P19622 333 aaPredicted RBP25.58■■□□□ 1.68
GFRA3-202ENST00000378362 PIBF1Q8WXW3 757 aa25.58■■□□□ 1.68
GFRA3-202ENST00000378362 RNF146Q9NTX7 359 aa25.58■■□□□ 1.68
GFRA3-202ENST00000378362 HMGCRP04035 888 aa25.57■■□□□ 1.68
GFRA3-202ENST00000378362 XRCC5P13010 732 aaKnown RBP25.57■■□□□ 1.68
GFRA3-202ENST00000378362 EXOSC10Q01780 885 aaKnown RBP25.57■■□□□ 1.68
GFRA3-202ENST00000378362 USH1GQ495M9 461 aa25.57■■□□□ 1.68
GFRA3-202ENST00000378362 ASPRV1Q53RT3 343 aa25.57■■□□□ 1.68
GFRA3-202ENST00000378362 CATIPQ7Z7H3 387 aa25.57■■□□□ 1.68
GFRA3-202ENST00000378362 ZNF654Q8IZM8 581 aa25.57■■□□□ 1.68
GFRA3-202ENST00000378362 CMTR1Q8N1G2 835 aaKnown RBP25.57■■□□□ 1.68
GFRA3-202ENST00000378362 KCNB2Q92953 911 aa25.57■■□□□ 1.68
GFRA3-202ENST00000378362 GTF3C3Q9Y5Q9 886 aa25.57■■□□□ 1.68
GFRA3-202ENST00000378362 DDX49Q9Y6V7 483 aaKnown RBP25.57■■□□□ 1.68
GFRA3-202ENST00000378362 PRKAR2AP13861 404 aaKnown RBP25.56■■□□□ 1.68
GFRA3-202ENST00000378362 OAZ1P54368 228 aa25.56■■□□□ 1.68
GFRA3-202ENST00000378362 UBXN2AP68543 259 aa25.56■■□□□ 1.68
GFRA3-202ENST00000378362 DHX32Q7L7V1 743 aaKnown RBP25.56■■□□□ 1.68
GFRA3-202ENST00000378362 ANKRD35Q8N283 1001 aa25.56■■□□□ 1.68
GFRA3-202ENST00000378362 PURBQ96QR8 312 aaKnown RBP25.56■■□□□ 1.68
GFRA3-202ENST00000378362 TMEM106CQ9BVX2 250 aa25.56■■□□□ 1.68
GFRA3-202ENST00000378362 JMJD4Q9H9V9 463 aa25.56■■□□□ 1.68
GFRA3-202ENST00000378362 MYH6P13533 1939 aa25.56■■□□□ 1.68
GFRA3-202ENST00000378362 CACNB2Q08289 660 aaPredicted RBP25.56■■□□□ 1.68
GFRA3-202ENST00000378362 DDX11Q96FC9 970 aa25.56■■□□□ 1.68
GFRA3-202ENST00000378362 TMEM87BQ96K49 555 aa25.56■■□□□ 1.68
GFRA3-202ENST00000378362 PALM3A6NDB9 673 aaPredicted RBP25.55■■□□□ 1.68
GFRA3-202ENST00000378362 CCDC69A6NI79 296 aa25.55■■□□□ 1.68
GFRA3-202ENST00000378362 ICAM1P05362 532 aa25.55■■□□□ 1.68
GFRA3-202ENST00000378362 FDX1P10109 184 aa25.55■■□□□ 1.68
GFRA3-202ENST00000378362 GRM4Q14833 912 aa25.55■■□□□ 1.68
GFRA3-202ENST00000378362 CDC37Q16543 378 aaPredicted RBP25.55■■□□□ 1.68
GFRA3-202ENST00000378362 PRAMEF19Q5SWL8 479 aa25.55■■□□□ 1.68
GFRA3-202ENST00000378362 HOXC6P09630 235 aa25.54■■□□□ 1.68
GFRA3-202ENST00000378362 CCND3P30281 292 aaPredicted RBP25.54■■□□□ 1.68
GFRA3-202ENST00000378362 CNTN2Q02246 1040 aa25.54■■□□□ 1.68
GFRA3-202ENST00000378362 KRT32Q14532 448 aa25.54■■□□□ 1.68
GFRA3-202ENST00000378362 NFIBO00712 420 aa25.53■■□□□ 1.68
GFRA3-202ENST00000378362 CASTP20810 708 aaKnown RBP25.53■■□□□ 1.68
GFRA3-202ENST00000378362 HOMER1Q86YM7 354 aa25.53■■□□□ 1.68
GFRA3-202ENST00000378362 ABRAQ8N0Z2 381 aa25.53■■□□□ 1.68
GFRA3-202ENST00000378362 MAML3Q96JK9 1138 aa25.53■■□□□ 1.68
GFRA3-202ENST00000378362 ACAD9Q9H845 621 aa25.53■■□□□ 1.68
GFRA3-202ENST00000378362 A1CFQ9NQ94 594 aaKnown RBP25.53■■□□□ 1.68
GFRA3-202ENST00000378362 PLXNA1Q9UIW2 1896 aa25.53■■□□□ 1.68
GFRA3-202ENST00000378362 BRPF3Q9ULD4 1205 aa25.53■■□□□ 1.68
GFRA3-202ENST00000378362 QRICH1Q2TAL8 776 aa25.53■■□□□ 1.68
GFRA3-202ENST00000378362 NSMFQ6X4W1 530 aa25.53■■□□□ 1.68
GFRA3-202ENST00000378362 CHST13Q8NET6 341 aa25.53■■□□□ 1.68
GFRA3-202ENST00000378362 DEFB118Q96PH6 123 aa25.53■■□□□ 1.68
GFRA3-202ENST00000378362 MCM3APO60318 1980 aa25.53■■□□□ 1.68
GFRA3-202ENST00000378362 PDE4DIPQ5VU43 2346 aa25.52■■□□□ 1.68
GFRA3-202ENST00000378362 CYTH3O43739 400 aa25.52■■□□□ 1.68
GFRA3-202ENST00000378362 ZNF792Q3KQV3 632 aa25.52■■□□□ 1.68
GFRA3-202ENST00000378362 MICU3Q86XE3 530 aa25.52■■□□□ 1.68
GFRA3-202ENST00000378362 CCDC82Q8N4S0 544 aa25.52■■□□□ 1.68
GFRA3-202ENST00000378362 NAP1L2Q9ULW6 460 aaPredicted RBP25.52■■□□□ 1.68
GFRA3-202ENST00000378362 SLC12A7Q9Y666 1083 aa25.52■■□□□ 1.68
GFRA3-202ENST00000378362 COPB2P35606 906 aa25.51■■□□□ 1.67
GFRA3-202ENST00000378362 LIFRP42702 1097 aa25.51■■□□□ 1.67
GFRA3-202ENST00000378362 Q6ZUG5 572 aa25.51■■□□□ 1.67
GFRA3-202ENST00000378362 LARP6Q9BRS8 491 aaKnown RBP25.51■■□□□ 1.67
GFRA3-202ENST00000378362 PLEKHA8P1O95397 391 aa25.51■■□□□ 1.67
GFRA3-202ENST00000378362 BLOC1S2Q6QNY1 142 aa25.51■■□□□ 1.67
GFRA3-202ENST00000378362 TRPV1Q8NER1 839 aa25.51■■□□□ 1.67
GFRA3-202ENST00000378362 PIGSQ96S52 555 aa25.51■■□□□ 1.67
GFRA3-202ENST00000378362 UPF3BQ9BZI7 483 aaKnown RBP25.51■■□□□ 1.67
GFRA3-202ENST00000378362 PPP1R11O60927 126 aaPredicted RBP25.5■■□□□ 1.67
GFRA3-202ENST00000378362 FGD1P98174 961 aa25.5■■□□□ 1.67
GFRA3-202ENST00000378362 TBC1D5Q92609 795 aa25.5■■□□□ 1.67
GFRA3-202ENST00000378362 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.5■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms