RNA–Protein interactions for RNA: ENST00000377499.9

LMO7-204, Transcript of LIM domain 7, human

TSL 2

Gene LMO7, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMO7-204	ENST00000377499	NDUFA8	P51970	172 aa		13.27	□□□□□ -0.29
LMO7-204	ENST00000377499	SNAP25	P60880	206 aa		13.27	□□□□□ -0.29
LMO7-204	ENST00000377499	NOM1	Q5C9Z4	860 aa	Known RBP	13.27	□□□□□ -0.29
LMO7-204	ENST00000377499	GML	Q99445	158 aa		13.27	□□□□□ -0.29
LMO7-204	ENST00000377499	NCAPG	Q9BPX3	1015 aa		13.27	□□□□□ -0.29
LMO7-204	ENST00000377499	TULP2	O00295	520 aa		13.26	□□□□□ -0.29
LMO7-204	ENST00000377499	FAM160A1	Q05DH4	1040 aa		13.26	□□□□□ -0.29
LMO7-204	ENST00000377499	TNFAIP1	Q13829	316 aa		13.26	□□□□□ -0.29
LMO7-204	ENST00000377499	NAA30	Q147X3	362 aa	Predicted RBP	13.26	□□□□□ -0.29
LMO7-204	ENST00000377499	TTC38	Q5R3I4	469 aa		13.26	□□□□□ -0.29
LMO7-204	ENST00000377499	KRI1	Q8N9T8	703 aa	Known RBP	13.26	□□□□□ -0.29
LMO7-204	ENST00000377499	GOLPH3L	Q9H4A5	285 aa		13.26	□□□□□ -0.29
LMO7-204	ENST00000377499	ARHGEF10L	Q9HCE6	1279 aa		13.26	□□□□□ -0.29
LMO7-204	ENST00000377499	MRVI1	Q9Y6F6	885 aa		13.26	□□□□□ -0.29
LMO7-204	ENST00000377499		F5H6K3	240 aa		13.26	□□□□□ -0.29
LMO7-204	ENST00000377499	SYK	P43405	635 aa		13.26	□□□□□ -0.29
LMO7-204	ENST00000377499	KLRC3	Q07444	240 aa		13.26	□□□□□ -0.29
LMO7-204	ENST00000377499	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	13.26	□□□□□ -0.29
LMO7-204	ENST00000377499	BIN2	Q9UBW5	565 aa	Predicted RBP	13.26	□□□□□ -0.29
LMO7-204	ENST00000377499	KIF4B	Q2VIQ3	1234 aa		13.26	□□□□□ -0.29
LMO7-204	ENST00000377499	HS1BP3	Q53T59	392 aa		13.26	□□□□□ -0.29
LMO7-204	ENST00000377499	ISM2	Q6H9L7	571 aa		13.26	□□□□□ -0.29
LMO7-204	ENST00000377499	MAP3K14	Q99558	947 aa		13.26	□□□□□ -0.29
LMO7-204	ENST00000377499	RNF181	Q9P0P0	153 aa		13.26	□□□□□ -0.29
LMO7-204	ENST00000377499	HERC5	Q9UII4	1024 aa	Known RBP	13.26	□□□□□ -0.29
LMO7-204	ENST00000377499	SH3BP1	Q9Y3L3	701 aa		13.26	□□□□□ -0.29
LMO7-204	ENST00000377499	USP17L10	C9JJH3	530 aa		13.25	□□□□□ -0.29
LMO7-204	ENST00000377499	TMEM232	C9JQI7	657 aa		13.25	□□□□□ -0.29
LMO7-204	ENST00000377499	GNA11	P29992	359 aa		13.25	□□□□□ -0.29
LMO7-204	ENST00000377499	INF2	Q27J81	1249 aa		13.25	□□□□□ -0.29
LMO7-204	ENST00000377499	EARS2	Q5JPH6	523 aa	Known RBP	13.25	□□□□□ -0.29
LMO7-204	ENST00000377499	GPATCH4	Q5T3I0	446 aa	Known RBP	13.25	□□□□□ -0.29
LMO7-204	ENST00000377499	CALR3	Q96L12	384 aa	Known RBP	13.25	□□□□□ -0.29
LMO7-204	ENST00000377499	CLSTN2	Q9H4D0	955 aa		13.25	□□□□□ -0.29
LMO7-204	ENST00000377499	PCDHA4	Q9UN74	947 aa		13.25	□□□□□ -0.29
LMO7-204	ENST00000377499	BIN1	O00499	593 aa		13.25	□□□□□ -0.29
LMO7-204	ENST00000377499	ZNF543	Q08ER8	600 aa		13.25	□□□□□ -0.29
LMO7-204	ENST00000377499	USH1G	Q495M9	461 aa		13.25	□□□□□ -0.29
LMO7-204	ENST00000377499	ICE2	Q659A1	982 aa		13.25	□□□□□ -0.29
LMO7-204	ENST00000377499	ADGRF4	Q8IZF3	695 aa		13.25	□□□□□ -0.29
LMO7-204	ENST00000377499	SGIP1	Q9BQI5	828 aa		13.25	□□□□□ -0.29
LMO7-204	ENST00000377499	ADAMTSL1	Q8N6G6	1762 aa		13.25	□□□□□ -0.29
LMO7-204	ENST00000377499	NID2	Q14112	1375 aa		13.25	□□□□□ -0.29
LMO7-204	ENST00000377499	VWA3A	A6NCI4	1184 aa		13.25	□□□□□ -0.29
LMO7-204	ENST00000377499	PFKFB1	P16118	471 aa		13.25	□□□□□ -0.29
LMO7-204	ENST00000377499	LETM2	Q2VYF4	491 aa		13.25	□□□□□ -0.29
LMO7-204	ENST00000377499	HACL1	Q9UJ83	578 aa		13.25	□□□□□ -0.29
LMO7-204	ENST00000377499	ASTN2	O75129	1339 aa	Predicted RBP	13.24	□□□□□ -0.29
LMO7-204	ENST00000377499	GOLGA6L6	A8MZA4	724 aa		13.24	□□□□□ -0.29
LMO7-204	ENST00000377499	TOB1	P50616	345 aa	Predicted RBP	13.24	□□□□□ -0.29
LMO7-204	ENST00000377499	SPZ1	Q9BXG8	430 aa		13.24	□□□□□ -0.29
LMO7-204	ENST00000377499	BARHL2	Q9NY43	387 aa		13.24	□□□□□ -0.29
LMO7-204	ENST00000377499	RPS12	P25398	132 aa	Known RBP	13.24	□□□□□ -0.29
LMO7-204	ENST00000377499	LMOD1	P29536	600 aa	Predicted RBP	13.24	□□□□□ -0.29
LMO7-204	ENST00000377499	ECE1	P42892	770 aa		13.24	□□□□□ -0.29
LMO7-204	ENST00000377499	GPR162	Q16538	588 aa		13.24	□□□□□ -0.29
LMO7-204	ENST00000377499	KIAA1551	Q9HCM1	1747 aa		13.24	□□□□□ -0.29
LMO7-204	ENST00000377499	ZNF541	Q9H0D2	1346 aa		13.24	□□□□□ -0.29
LMO7-204	ENST00000377499	ZNF202	O95125	648 aa		13.23	□□□□□ -0.29
LMO7-204	ENST00000377499	LMNB1	P20700	586 aa		13.23	□□□□□ -0.29
LMO7-204	ENST00000377499	TYW1B	Q6NUM6	668 aa		13.23	□□□□□ -0.29
LMO7-204	ENST00000377499	CNNM3	Q8NE01	707 aa		13.23	□□□□□ -0.29
LMO7-204	ENST00000377499		A0A087WWV3	80 aa		13.23	□□□□□ -0.29
LMO7-204	ENST00000377499	PTGDR	Q13258	359 aa		13.23	□□□□□ -0.29
LMO7-204	ENST00000377499	ANGEL2	Q5VTE6	544 aa	Known RBP	13.23	□□□□□ -0.29
LMO7-204	ENST00000377499	SHISA4	Q96DD7	197 aa		13.23	□□□□□ -0.29
LMO7-204	ENST00000377499	CTDP1	Q9Y5B0	961 aa	Predicted RBP	13.23	□□□□□ -0.29
LMO7-204	ENST00000377499	CUTA	O60888	179 aa		13.23	□□□□□ -0.29
LMO7-204	ENST00000377499	NDUFB10	O96000	172 aa		13.23	□□□□□ -0.29
LMO7-204	ENST00000377499	TYRO3	Q06418	890 aa		13.23	□□□□□ -0.29
LMO7-204	ENST00000377499	REXO1	Q8N1G1	1221 aa	Known RBP	13.23	□□□□□ -0.29
LMO7-204	ENST00000377499	ACER1	Q8TDN7	264 aa		13.23	□□□□□ -0.29
LMO7-204	ENST00000377499	PIK3R5	Q8WYR1	880 aa		13.23	□□□□□ -0.29
LMO7-204	ENST00000377499	KIFC2	Q96AC6	838 aa		13.23	□□□□□ -0.29
LMO7-204	ENST00000377499	DEFB129	Q9H1M3	183 aa		13.23	□□□□□ -0.29
LMO7-204	ENST00000377499	NYAP2	Q9P242	653 aa		13.23	□□□□□ -0.29
LMO7-204	ENST00000377499	LAMB1	P07942	1786 aa		13.23	□□□□□ -0.29
LMO7-204	ENST00000377499	STXBP3	O00186	592 aa		13.22	□□□□□ -0.29
LMO7-204	ENST00000377499	BMP3	P12645	472 aa		13.22	□□□□□ -0.29
LMO7-204	ENST00000377499	ADCY7	P51828	1080 aa		13.22	□□□□□ -0.29
LMO7-204	ENST00000377499	SLC35G1	Q2M3R5	365 aa		13.22	□□□□□ -0.29
LMO7-204	ENST00000377499	TATDN1	Q6P1N9	297 aa		13.22	□□□□□ -0.29
LMO7-204	ENST00000377499	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	13.22	□□□□□ -0.29
LMO7-204	ENST00000377499	ZBTB21	Q9ULJ3	1066 aa		13.22	□□□□□ -0.29
LMO7-204	ENST00000377499		V9GYY5	206 aa	Predicted RBP	13.22	□□□□□ -0.29
LMO7-204	ENST00000377499	BECN2	A8MW95	431 aa		13.22	□□□□□ -0.29
LMO7-204	ENST00000377499	CCNT1	O60563	726 aa	Known RBP	13.22	□□□□□ -0.29
LMO7-204	ENST00000377499	PPP6R2	O75170	966 aa		13.22	□□□□□ -0.29
LMO7-204	ENST00000377499	NPM3	O75607	178 aa	Known RBP	13.22	□□□□□ -0.29
LMO7-204	ENST00000377499	DDN	O94850	711 aa	Predicted RBP	13.22	□□□□□ -0.29
LMO7-204	ENST00000377499	CMA1	P23946	247 aa		13.22	□□□□□ -0.29
LMO7-204	ENST00000377499	ANO6	Q4KMQ2	910 aa		13.22	□□□□□ -0.29
LMO7-204	ENST00000377499	UIMC1	Q96RL1	719 aa		13.22	□□□□□ -0.29
LMO7-204	ENST00000377499	SYT17	Q9BSW7	474 aa		13.22	□□□□□ -0.29
LMO7-204	ENST00000377499	JMJD4	Q9H9V9	463 aa		13.22	□□□□□ -0.29
LMO7-204	ENST00000377499	KCNH3	Q9ULD8	1083 aa		13.22	□□□□□ -0.29
LMO7-204	ENST00000377499		A0A1W2PQ27	194 aa		13.22	□□□□□ -0.29
LMO7-204	ENST00000377499		A0A1W2PQ64	194 aa		13.22	□□□□□ -0.29
LMO7-204	ENST00000377499		A0A1W2PQD8	194 aa		13.22	□□□□□ -0.29
LMO7-204	ENST00000377499	CTAGE5	O15320	804 aa		13.22	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms