RNA–Protein interactions for RNA: ENST00000377194.7

TRIM27-201, Transcript of tripartite motif containing 27, humanhuman

TSL 1 (best) BASIC

Gene TRIM27, Length 2,686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-201ENST00000377194 ERCC5P28715 1186 aaPredicted RBP19.32■□□□□ 0.68
TRIM27-201ENST00000377194 RABGGTAQ92696 567 aa19.32■□□□□ 0.68
TRIM27-201ENST00000377194 KIFC2Q96AC6 838 aa19.32■□□□□ 0.68
TRIM27-201ENST00000377194 BLZF1Q9H2G9 400 aa19.32■□□□□ 0.68
TRIM27-201ENST00000377194 TCP11L1Q9NUJ3 509 aa19.32■□□□□ 0.68
TRIM27-201ENST00000377194 PSD3Q9NYI0 1048 aa19.32■□□□□ 0.68
TRIM27-201ENST00000377194 PUF60Q9UHX1 559 aaKnown RBP19.32■□□□□ 0.68
TRIM27-201ENST00000377194 FAN1Q9Y2M0 1017 aa19.32■□□□□ 0.68
TRIM27-201ENST00000377194 AFF2P51816 1311 aa19.31■□□□□ 0.68
TRIM27-201ENST00000377194 M0R2N6 131 aa19.31■□□□□ 0.68
TRIM27-201ENST00000377194 ADKP55263 362 aaKnown RBP19.31■□□□□ 0.68
TRIM27-201ENST00000377194 TBX2Q13207 712 aaPredicted RBP19.31■□□□□ 0.68
TRIM27-201ENST00000377194 CUL4BQ13620 913 aa19.31■□□□□ 0.68
TRIM27-201ENST00000377194 GOLGA1Q92805 767 aa19.31■□□□□ 0.68
TRIM27-201ENST00000377194 GGA1Q9UJY5 639 aa19.31■□□□□ 0.68
TRIM27-201ENST00000377194 PCDHA4Q9UN74 947 aa19.31■□□□□ 0.68
TRIM27-201ENST00000377194 GPR75-ASB3A0A0A6YYF3 556 aa19.31■□□□□ 0.68
TRIM27-201ENST00000377194 EIF3CLB5ME19 914 aaKnown RBP19.31■□□□□ 0.68
TRIM27-201ENST00000377194 MEX3CQ5U5Q3 659 aaKnown RBP19.31■□□□□ 0.68
TRIM27-201ENST00000377194 EIF3CQ99613 913 aaKnown RBP19.31■□□□□ 0.68
TRIM27-201ENST00000377194 PPP1R3GB7ZBB8 358 aa19.3■□□□□ 0.68
TRIM27-201ENST00000377194 CALML3P27482 149 aa19.3■□□□□ 0.68
TRIM27-201ENST00000377194 TXLNAP40222 546 aa19.3■□□□□ 0.68
TRIM27-201ENST00000377194 DDR1Q08345 913 aa19.3■□□□□ 0.68
TRIM27-201ENST00000377194 MFSD14BQ5SR56 506 aa19.3■□□□□ 0.68
TRIM27-201ENST00000377194 APTXQ7Z2E3 356 aaKnown RBP19.3■□□□□ 0.68
TRIM27-201ENST00000377194 AMOTL1Q8IY63 956 aa19.3■□□□□ 0.68
TRIM27-201ENST00000377194 GSDMAQ96QA5 445 aa19.3■□□□□ 0.68
TRIM27-201ENST00000377194 YY1AP1Q9H869 796 aa19.3■□□□□ 0.68
TRIM27-201ENST00000377194 GOLGB1Q14789 3259 aaKnown RBP19.3■□□□□ 0.68
TRIM27-201ENST00000377194 COBLO75128 1261 aa19.3■□□□□ 0.68
TRIM27-201ENST00000377194 ATP2B4P23634 1241 aa19.3■□□□□ 0.68
TRIM27-201ENST00000377194 CDK8P49336 464 aa19.3■□□□□ 0.68
TRIM27-201ENST00000377194 PDXDC2PQ6P474 469 aa19.3■□□□□ 0.68
TRIM27-201ENST00000377194 SH3GLB2Q9NR46 395 aa19.3■□□□□ 0.68
TRIM27-201ENST00000377194 PALM3A6NDB9 673 aaPredicted RBP19.29■□□□□ 0.68
TRIM27-201ENST00000377194 RHBDL3P58872 404 aa19.29■□□□□ 0.68
TRIM27-201ENST00000377194 NR1I3Q14994 352 aa19.29■□□□□ 0.68
TRIM27-201ENST00000377194 TEX11Q8IYF3 940 aa19.29■□□□□ 0.68
TRIM27-201ENST00000377194 GPATCH11Q8N954 259 aa19.29■□□□□ 0.68
TRIM27-201ENST00000377194 IQUBQ8NA54 791 aa19.29■□□□□ 0.68
TRIM27-201ENST00000377194 TBC1D16Q8TBP0 767 aa19.29■□□□□ 0.68
TRIM27-201ENST00000377194 CCDC12Q8WUD4 166 aaPredicted RBP19.29■□□□□ 0.68
TRIM27-201ENST00000377194 GEMIN8Q9NWZ8 242 aaKnown RBP19.29■□□□□ 0.68
TRIM27-201ENST00000377194 GOLGA6L9A6NEM1 432 aa19.29■□□□□ 0.68
TRIM27-201ENST00000377194 HEATR3Q7Z4Q2 680 aa19.29■□□□□ 0.68
TRIM27-201ENST00000377194 TC2NQ8N9U0 490 aa19.29■□□□□ 0.68
TRIM27-201ENST00000377194 RBM17Q96I25 401 aaKnown RBP19.29■□□□□ 0.68
TRIM27-201ENST00000377194 PCDHA6Q9UN73 950 aa19.29■□□□□ 0.68
TRIM27-201ENST00000377194 PCDHA8Q9Y5H6 950 aa19.29■□□□□ 0.68
TRIM27-201ENST00000377194 FLT1P17948 1338 aa19.29■□□□□ 0.68
TRIM27-201ENST00000377194 MAP2K7O14733 419 aa19.28■□□□□ 0.68
TRIM27-201ENST00000377194 TEX33O43247 280 aa19.28■□□□□ 0.68
TRIM27-201ENST00000377194 TFRCP02786 760 aaKnown RBP19.28■□□□□ 0.68
TRIM27-201ENST00000377194 SPECC1LQ69YQ0 1117 aa19.28■□□□□ 0.68
TRIM27-201ENST00000377194 UBR3Q6ZT12 1888 aa19.28■□□□□ 0.68
TRIM27-201ENST00000377194 STX10O60499 249 aa19.28■□□□□ 0.68
TRIM27-201ENST00000377194 IVLP07476 585 aa19.28■□□□□ 0.68
TRIM27-201ENST00000377194 MAGEA9P43362 315 aa19.28■□□□□ 0.68
TRIM27-201ENST00000377194 SPATA1Q5VX52 437 aa19.28■□□□□ 0.68
TRIM27-201ENST00000377194 TEX2Q8IWB9 1127 aa19.28■□□□□ 0.68
TRIM27-201ENST00000377194 EYA3Q99504 573 aa19.28■□□□□ 0.68
TRIM27-201ENST00000377194 TMEM60Q9H2L4 133 aa19.28■□□□□ 0.68
TRIM27-201ENST00000377194 SNED1Q8TER0 1413 aa19.28■□□□□ 0.68
TRIM27-201ENST00000377194 CCDC151A5D8V7 595 aa19.28■□□□□ 0.68
TRIM27-201ENST00000377194 STXBP3O00186 592 aa19.28■□□□□ 0.68
TRIM27-201ENST00000377194 GNAQP50148 359 aa19.28■□□□□ 0.68
TRIM27-201ENST00000377194 INF2Q27J81 1249 aa19.28■□□□□ 0.68
TRIM27-201ENST00000377194 C16orf86Q6ZW13 317 aa19.28■□□□□ 0.68
TRIM27-201ENST00000377194 SECISBP2LQ93073 1101 aaKnown RBP19.28■□□□□ 0.68
TRIM27-201ENST00000377194 PNKPQ96T60 521 aa19.28■□□□□ 0.68
TRIM27-201ENST00000377194 NAV1Q8NEY1 1877 aa19.28■□□□□ 0.68
TRIM27-201ENST00000377194 CDK5RAP2Q96SN8 1893 aa19.27■□□□□ 0.68
TRIM27-201ENST00000377194 A0A1B0GTH6 734 aa19.27■□□□□ 0.68
TRIM27-201ENST00000377194 KLRF2D3W0D1 207 aa19.27■□□□□ 0.68
TRIM27-201ENST00000377194 BBOX1O75936 387 aa19.27■□□□□ 0.68
TRIM27-201ENST00000377194 ARL6IP4Q66PJ3 421 aaKnown RBP19.27■□□□□ 0.68
TRIM27-201ENST00000377194 BARHL2Q9NY43 387 aa19.27■□□□□ 0.68
TRIM27-201ENST00000377194 PP2D1A8MPX8 630 aa19.27■□□□□ 0.67
TRIM27-201ENST00000377194 GUCY2CP25092 1073 aa19.27■□□□□ 0.67
TRIM27-201ENST00000377194 MTF1Q14872 753 aa19.27■□□□□ 0.67
TRIM27-201ENST00000377194 USP17L2Q6R6M4 530 aa19.27■□□□□ 0.67
TRIM27-201ENST00000377194 MRPL44Q9H9J2 332 aaKnown RBP19.27■□□□□ 0.67
TRIM27-201ENST00000377194 SYNRGQ9UMZ2 1314 aa19.26■□□□□ 0.67
TRIM27-201ENST00000377194 A0A0U1RQJ8 604 aa19.26■□□□□ 0.67
TRIM27-201ENST00000377194 CCDC194A0A1B0GVG4 234 aa19.26■□□□□ 0.67
TRIM27-201ENST00000377194 C6orf229H3BNL8 230 aa19.26■□□□□ 0.67
TRIM27-201ENST00000377194 HOXA10P31260 410 aaPredicted RBP19.26■□□□□ 0.67
TRIM27-201ENST00000377194 NT5C2P49902 561 aa19.26■□□□□ 0.67
TRIM27-201ENST00000377194 CHMP4BP1P59074 171 aa19.26■□□□□ 0.67
TRIM27-201ENST00000377194 CCDC178Q5BJE1 867 aa19.26■□□□□ 0.67
TRIM27-201ENST00000377194 BEND6Q5SZJ8 279 aaPredicted RBP19.26■□□□□ 0.67
TRIM27-201ENST00000377194 ATRIPQ8WXE1 791 aa19.26■□□□□ 0.67
TRIM27-201ENST00000377194 CCDC102AQ96A19 550 aa19.26■□□□□ 0.67
TRIM27-201ENST00000377194 ANKZF1Q9H8Y5 726 aa19.26■□□□□ 0.67
TRIM27-201ENST00000377194 NEDD1Q8NHV4 660 aa19.26■□□□□ 0.67
TRIM27-201ENST00000377194 CEP95Q96GE4 821 aa19.26■□□□□ 0.67
TRIM27-201ENST00000377194 POLRMTO00411 1230 aaKnown RBP19.25■□□□□ 0.67
TRIM27-201ENST00000377194 CDKAL1Q5VV42 579 aa19.25■□□□□ 0.67
TRIM27-201ENST00000377194 JAKMIP3Q5VZ66 844 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms