RNA–Protein interactions for RNA: ENST00000376839.7

ACTN1-202, Transcript of actinin alpha 1, humanhuman

TSL 2 BASIC

Gene ACTN1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-202ENST00000376839 AGPAT5Q9NUQ2 364 aa14.84□□□□□ -0.03
ACTN1-202ENST00000376839 CAPN11Q9UMQ6 739 aa14.84□□□□□ -0.03
ACTN1-202ENST00000376839 PCDHA6Q9UN73 950 aa14.84□□□□□ -0.03
ACTN1-202ENST00000376839 PCDHA8Q9Y5H6 950 aa14.84□□□□□ -0.03
ACTN1-202ENST00000376839 CCDC194A0A1B0GVG4 234 aa14.84□□□□□ -0.03
ACTN1-202ENST00000376839 A0A1W2PQC6 194 aa14.84□□□□□ -0.03
ACTN1-202ENST00000376839 PSMD14O00487 310 aa14.84□□□□□ -0.03
ACTN1-202ENST00000376839 KCNB1Q14721 858 aa14.84□□□□□ -0.03
ACTN1-202ENST00000376839 DDB1Q16531 1140 aa14.84□□□□□ -0.03
ACTN1-202ENST00000376839 SBK1Q52WX2 424 aa14.84□□□□□ -0.03
ACTN1-202ENST00000376839 MARCH10Q8NA82 808 aaPredicted RBP14.84□□□□□ -0.03
ACTN1-202ENST00000376839 DYNLL2Q96FJ2 89 aa14.84□□□□□ -0.03
ACTN1-202ENST00000376839 RCCD1A6NED2 376 aa14.84□□□□□ -0.03
ACTN1-202ENST00000376839 RASSF10A6NK89 507 aa14.84□□□□□ -0.03
ACTN1-202ENST00000376839 EIF3JO75822 258 aaKnown RBP14.84□□□□□ -0.03
ACTN1-202ENST00000376839 EEF1GP26641 437 aaKnown RBP14.84□□□□□ -0.03
ACTN1-202ENST00000376839 CCDC122Q5T0U0 273 aa14.84□□□□□ -0.03
ACTN1-202ENST00000376839 MMS19Q96T76 1030 aa14.84□□□□□ -0.03
ACTN1-202ENST00000376839 DUSP9Q99956 384 aaKnown RBP14.84□□□□□ -0.03
ACTN1-202ENST00000376839 THAP9Q9H5L6 903 aa14.84□□□□□ -0.03
ACTN1-202ENST00000376839 HAUS4Q9H6D7 363 aa14.84□□□□□ -0.03
ACTN1-202ENST00000376839 KBTBD4Q9NVX7 518 aa14.84□□□□□ -0.03
ACTN1-202ENST00000376839 WNK3Q9BYP7 1800 aa14.83□□□□□ -0.04
ACTN1-202ENST00000376839 CYTH3O43739 400 aa14.83□□□□□ -0.04
ACTN1-202ENST00000376839 PHACTR2O75167 634 aa14.83□□□□□ -0.04
ACTN1-202ENST00000376839 RHOBTB3O94955 611 aa14.83□□□□□ -0.04
ACTN1-202ENST00000376839 HIBADHP31937 336 aaKnown RBP14.83□□□□□ -0.04
ACTN1-202ENST00000376839 UBA7P41226 1012 aa14.83□□□□□ -0.04
ACTN1-202ENST00000376839 MSL3Q8N5Y2 521 aaKnown RBP14.83□□□□□ -0.04
ACTN1-202ENST00000376839 GIMAP8Q8ND71 665 aaPredicted RBP14.83□□□□□ -0.04
ACTN1-202ENST00000376839 TMEM51Q9NW97 253 aa14.83□□□□□ -0.04
ACTN1-202ENST00000376839 MAD2L2Q9UI95 211 aa14.83□□□□□ -0.04
ACTN1-202ENST00000376839 CASZ1Q86V15 1759 aa14.83□□□□□ -0.04
ACTN1-202ENST00000376839 USP17L3A6NCW0 530 aa14.83□□□□□ -0.04
ACTN1-202ENST00000376839 USP17L4A6NCW7 530 aa14.83□□□□□ -0.04
ACTN1-202ENST00000376839 PSMA7O14818 248 aa14.83□□□□□ -0.04
ACTN1-202ENST00000376839 NKRFO15226 690 aaKnown RBP eCLIP14.83□□□□□ -0.04
ACTN1-202ENST00000376839 KCNQ4P56696 695 aa14.83□□□□□ -0.04
ACTN1-202ENST00000376839 USP17L1Q7RTZ2 530 aa14.83□□□□□ -0.04
ACTN1-202ENST00000376839 HEATR3Q7Z4Q2 680 aa14.83□□□□□ -0.04
ACTN1-202ENST00000376839 TXNRD3Q86VQ6 643 aa14.83□□□□□ -0.04
ACTN1-202ENST00000376839 CCDC102AQ96A19 550 aa14.83□□□□□ -0.04
ACTN1-202ENST00000376839 LACRTQ9GZZ8 138 aa14.83□□□□□ -0.04
ACTN1-202ENST00000376839 GBP3Q9H0R5 595 aa14.83□□□□□ -0.04
ACTN1-202ENST00000376839 SH3GLB2Q9NR46 395 aa14.83□□□□□ -0.04
ACTN1-202ENST00000376839 STRCQ7RTU9 1775 aa14.83□□□□□ -0.04
ACTN1-202ENST00000376839 SRGNP10124 158 aa14.82□□□□□ -0.04
ACTN1-202ENST00000376839 WDR93Q6P2C0 686 aa14.82□□□□□ -0.04
ACTN1-202ENST00000376839 CCDC24Q8N4L8 307 aa14.82□□□□□ -0.04
ACTN1-202ENST00000376839 CCDC148Q8NFR7 591 aa14.82□□□□□ -0.04
ACTN1-202ENST00000376839 CAPZA3Q96KX2 299 aa14.82□□□□□ -0.04
ACTN1-202ENST00000376839 TTYH3Q9C0H2 523 aa14.82□□□□□ -0.04
ACTN1-202ENST00000376839 MAGEC2Q9UBF1 373 aaPredicted RBP14.82□□□□□ -0.04
ACTN1-202ENST00000376839 COL16A1Q07092 1604 aaPredicted RBP14.82□□□□□ -0.04
ACTN1-202ENST00000376839 GTF2E1P29083 439 aaPredicted RBP14.82□□□□□ -0.04
ACTN1-202ENST00000376839 GRM4Q14833 912 aa14.82□□□□□ -0.04
ACTN1-202ENST00000376839 MEA1Q16626 185 aa14.82□□□□□ -0.04
ACTN1-202ENST00000376839 CSGALNACT2Q8N6G5 542 aa14.82□□□□□ -0.04
ACTN1-202ENST00000376839 TUBGCP2Q9BSJ2 902 aa14.82□□□□□ -0.04
ACTN1-202ENST00000376839 CCSER1Q9C0I3 900 aa14.82□□□□□ -0.04
ACTN1-202ENST00000376839 FLT1P17948 1338 aa14.81□□□□□ -0.04
ACTN1-202ENST00000376839 KCNQ2O43526 872 aa14.81□□□□□ -0.04
ACTN1-202ENST00000376839 USP14P54578 494 aa14.81□□□□□ -0.04
ACTN1-202ENST00000376839 STIM1Q13586 685 aa14.81□□□□□ -0.04
ACTN1-202ENST00000376839 TSR1Q2NL82 804 aaKnown RBP14.81□□□□□ -0.04
ACTN1-202ENST00000376839 CLEC4GQ6UXB4 293 aa14.81□□□□□ -0.04
ACTN1-202ENST00000376839 GOLGA5Q8TBA6 731 aa14.81□□□□□ -0.04
ACTN1-202ENST00000376839 JAKMIP2Q96AA8 810 aa14.81□□□□□ -0.04
ACTN1-202ENST00000376839 CPVLQ9H3G5 476 aa14.81□□□□□ -0.04
ACTN1-202ENST00000376839 SAR1BQ9Y6B6 198 aa14.81□□□□□ -0.04
ACTN1-202ENST00000376839 DUSP10Q9Y6W6 482 aa14.81□□□□□ -0.04
ACTN1-202ENST00000376839 A0A0U1RQG5 324 aaPredicted RBP14.81□□□□□ -0.04
ACTN1-202ENST00000376839 STXBP3O00186 592 aa14.81□□□□□ -0.04
ACTN1-202ENST00000376839 PLCG1P19174 1290 aa14.81□□□□□ -0.04
ACTN1-202ENST00000376839 ACTN2P35609 894 aa14.81□□□□□ -0.04
ACTN1-202ENST00000376839 DNM2P50570 870 aa14.81□□□□□ -0.04
ACTN1-202ENST00000376839 KIAA1328Q86T90 577 aa14.81□□□□□ -0.04
ACTN1-202ENST00000376839 SLC51AQ86UW1 340 aa14.81□□□□□ -0.04
ACTN1-202ENST00000376839 DGKHQ86XP1 1220 aa14.81□□□□□ -0.04
ACTN1-202ENST00000376839 SLC44A5Q8NCS7 719 aa14.81□□□□□ -0.04
ACTN1-202ENST00000376839 EXOC1Q9NV70 894 aa14.81□□□□□ -0.04
ACTN1-202ENST00000376839 TRIM21P19474 475 aaKnown RBP14.8□□□□□ -0.04
ACTN1-202ENST00000376839 RPS8P62241 208 aaKnown RBP14.8□□□□□ -0.04
ACTN1-202ENST00000376839 C12orf60Q5U649 245 aa14.8□□□□□ -0.04
ACTN1-202ENST00000376839 PAPD7Q5XG87 772 aaKnown RBP14.8□□□□□ -0.04
ACTN1-202ENST00000376839 TBC1D9BQ66K14 1250 aa14.8□□□□□ -0.04
ACTN1-202ENST00000376839 ANKRD40Q6AI12 368 aa14.8□□□□□ -0.04
ACTN1-202ENST00000376839 LCMT1Q9UIC8 334 aa14.8□□□□□ -0.04
ACTN1-202ENST00000376839 ZNF185O15231 689 aa14.8□□□□□ -0.04
ACTN1-202ENST00000376839 ZMYND10O75800 440 aa14.8□□□□□ -0.04
ACTN1-202ENST00000376839 GOLGA8HP0CJ92 632 aa14.8□□□□□ -0.04
ACTN1-202ENST00000376839 CYP27A1Q02318 531 aa14.8□□□□□ -0.04
ACTN1-202ENST00000376839 STK4Q13043 487 aa14.8□□□□□ -0.04
ACTN1-202ENST00000376839 CCDC178Q5BJE1 867 aa14.8□□□□□ -0.04
ACTN1-202ENST00000376839 DZIP1Q86YF9 867 aaKnown RBP14.8□□□□□ -0.04
ACTN1-202ENST00000376839 LINC00116Q8NCU8 138 aa14.8□□□□□ -0.04
ACTN1-202ENST00000376839 NHEJ1Q9H9Q4 299 aaPredicted RBP14.8□□□□□ -0.04
ACTN1-202ENST00000376839 MKRN1Q9UHC7 482 aaKnown RBP14.8□□□□□ -0.04
ACTN1-202ENST00000376839 TUBBP07437 444 aa14.79□□□□□ -0.04
ACTN1-202ENST00000376839 FCER1AP12319 257 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms