RNA–Protein interactions for RNA: ENST00000376266.9

CCHCR1-201, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,625 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-201ENST00000376266 TUBB4BP68371 445 aa16.97■□□□□ 0.31
CCHCR1-201ENST00000376266 KIF4BQ2VIQ3 1234 aa16.97■□□□□ 0.31
CCHCR1-201ENST00000376266 ZBED3Q96IU2 234 aaPredicted RBP16.97■□□□□ 0.31
CCHCR1-201ENST00000376266 L3MBTL3Q96JM7 780 aaPredicted RBP16.97■□□□□ 0.31
CCHCR1-201ENST00000376266 E7EWF7 191 aa16.96■□□□□ 0.31
CCHCR1-201ENST00000376266 GNAT2P19087 354 aa16.96■□□□□ 0.31
CCHCR1-201ENST00000376266 MMP14P50281 582 aa16.96■□□□□ 0.31
CCHCR1-201ENST00000376266 VSNL1P62760 191 aa16.96■□□□□ 0.31
CCHCR1-201ENST00000376266 SKIDA1Q1XH10 827 aa16.96■□□□□ 0.31
CCHCR1-201ENST00000376266 DNAJC21Q5F1R6 531 aaKnown RBP16.96■□□□□ 0.31
CCHCR1-201ENST00000376266 MMS22LQ6ZRQ5 1243 aa16.96■□□□□ 0.31
CCHCR1-201ENST00000376266 SUGP1Q8IWZ8 645 aaKnown RBP16.96■□□□□ 0.31
CCHCR1-201ENST00000376266 MICALL1Q8N3F8 863 aa16.96■□□□□ 0.31
CCHCR1-201ENST00000376266 EPB41L4AQ9HCS5 686 aaPredicted RBP16.96■□□□□ 0.31
CCHCR1-201ENST00000376266 ASTN2O75129 1339 aaPredicted RBP16.96■□□□□ 0.31
CCHCR1-201ENST00000376266 NFIAQ12857 509 aa16.96■□□□□ 0.3
CCHCR1-201ENST00000376266 MED4Q9NPJ6 270 aa16.96■□□□□ 0.3
CCHCR1-201ENST00000376266 FGAP02671 866 aa16.95■□□□□ 0.3
CCHCR1-201ENST00000376266 PICALMQ13492 652 aa16.95■□□□□ 0.3
CCHCR1-201ENST00000376266 ZNF569Q5MCW4 686 aa16.95■□□□□ 0.3
CCHCR1-201ENST00000376266 CCDC91Q7Z6B0 441 aa16.95■□□□□ 0.3
CCHCR1-201ENST00000376266 TADA2BQ86TJ2 420 aa16.95■□□□□ 0.3
CCHCR1-201ENST00000376266 MAPKAPK5Q8IW41 473 aa16.95■□□□□ 0.3
CCHCR1-201ENST00000376266 IFNL3Q8IZI9 196 aa16.95■□□□□ 0.3
CCHCR1-201ENST00000376266 DSCC1Q9BVC3 393 aa16.95■□□□□ 0.3
CCHCR1-201ENST00000376266 GJB4Q9NTQ9 266 aa16.95■□□□□ 0.3
CCHCR1-201ENST00000376266 A0A087WUV0 522 aaPredicted RBP16.95■□□□□ 0.3
CCHCR1-201ENST00000376266 CPP00450 1065 aa16.95■□□□□ 0.3
CCHCR1-201ENST00000376266 HIRAP54198 1017 aaPredicted RBP16.95■□□□□ 0.3
CCHCR1-201ENST00000376266 SLC39A14Q15043 492 aa16.95■□□□□ 0.3
CCHCR1-201ENST00000376266 MCTP2Q6DN12 878 aa16.95■□□□□ 0.3
CCHCR1-201ENST00000376266 DCP1AQ9NPI6 582 aaPredicted RBP16.95■□□□□ 0.3
CCHCR1-201ENST00000376266 DDX4Q9NQI0 724 aaKnown RBP16.95■□□□□ 0.3
CCHCR1-201ENST00000376266 SOWAHDA6NJG2 315 aa16.94■□□□□ 0.3
CCHCR1-201ENST00000376266 KIF28PB7ZC32 967 aa16.94■□□□□ 0.3
CCHCR1-201ENST00000376266 TUBB2AQ13885 445 aa16.94■□□□□ 0.3
CCHCR1-201ENST00000376266 TUBB2BQ9BVA1 445 aa16.94■□□□□ 0.3
CCHCR1-201ENST00000376266 ZNF70Q9UC06 446 aaPredicted RBP16.94■□□□□ 0.3
CCHCR1-201ENST00000376266 HACL1Q9UJ83 578 aa16.94■□□□□ 0.3
CCHCR1-201ENST00000376266 SCAF8Q9UPN6 1271 aaKnown RBP16.94■□□□□ 0.3
CCHCR1-201ENST00000376266 POTECB2RU33 542 aa16.94■□□□□ 0.3
CCHCR1-201ENST00000376266 PDE4BQ07343 736 aa16.94■□□□□ 0.3
CCHCR1-201ENST00000376266 SLC4A8Q2Y0W8 1093 aa16.94■□□□□ 0.3
CCHCR1-201ENST00000376266 AFAP1L1Q8TED9 768 aa16.94■□□□□ 0.3
CCHCR1-201ENST00000376266 ZNF526Q8TF50 670 aaPredicted RBP16.94■□□□□ 0.3
CCHCR1-201ENST00000376266 VEZTQ9HBM0 779 aa16.94■□□□□ 0.3
CCHCR1-201ENST00000376266 ADARB2Q9NS39 739 aaKnown RBP16.94■□□□□ 0.3
CCHCR1-201ENST00000376266 CTAGE9A4FU28 777 aa16.93■□□□□ 0.3
CCHCR1-201ENST00000376266 LRRIQ3A6PVS8 624 aaPredicted RBP16.93■□□□□ 0.3
CCHCR1-201ENST00000376266 TCP10Q12799 353 aa16.93■□□□□ 0.3
CCHCR1-201ENST00000376266 SPDYE2Q495Y8 402 aa16.93■□□□□ 0.3
CCHCR1-201ENST00000376266 ATP8A2Q9NTI2 1148 aa16.93■□□□□ 0.3
CCHCR1-201ENST00000376266 PCDHA5Q9Y5H7 936 aa16.93■□□□□ 0.3
CCHCR1-201ENST00000376266 FLT1P17948 1338 aa16.93■□□□□ 0.3
CCHCR1-201ENST00000376266 CTAGE15A4D2H0 777 aa16.93■□□□□ 0.3
CCHCR1-201ENST00000376266 TCP10L2B9ZVM9 353 aa16.93■□□□□ 0.3
CCHCR1-201ENST00000376266 RNF40O75150 1001 aa16.93■□□□□ 0.3
CCHCR1-201ENST00000376266 CTAGE8P0CG41 777 aa16.93■□□□□ 0.3
CCHCR1-201ENST00000376266 TDO2P48775 406 aa16.93■□□□□ 0.3
CCHCR1-201ENST00000376266 CTAGE6Q86UF2 777 aa16.93■□□□□ 0.3
CCHCR1-201ENST00000376266 CTAGE4Q8IX94 777 aa16.93■□□□□ 0.3
CCHCR1-201ENST00000376266 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.93■□□□□ 0.3
CCHCR1-201ENST00000376266 NACAP1Q9BZK3 213 aa16.93■□□□□ 0.3
CCHCR1-201ENST00000376266 NAPBQ9H115 298 aa16.93■□□□□ 0.3
CCHCR1-201ENST00000376266 SAP30BPQ9UHR5 308 aaKnown RBP16.93■□□□□ 0.3
CCHCR1-201ENST00000376266 ADGRG1Q9Y653 693 aa16.93■□□□□ 0.3
CCHCR1-201ENST00000376266 AKR1B15C9JRZ8 316 aaPredicted RBP16.92■□□□□ 0.3
CCHCR1-201ENST00000376266 CDC27P30260 824 aa16.92■□□□□ 0.3
CCHCR1-201ENST00000376266 EPHX2P34913 555 aa16.92■□□□□ 0.3
CCHCR1-201ENST00000376266 SWT1Q5T5J6 900 aaKnown RBP16.92■□□□□ 0.3
CCHCR1-201ENST00000376266 SHC4Q6S5L8 630 aa16.92■□□□□ 0.3
CCHCR1-201ENST00000376266 METTL16Q86W50 562 aaKnown RBP16.92■□□□□ 0.3
CCHCR1-201ENST00000376266 ZFPM1Q8IX07 1006 aa16.92■□□□□ 0.3
CCHCR1-201ENST00000376266 JMYQ8N9B5 988 aa16.92■□□□□ 0.3
CCHCR1-201ENST00000376266 MCM9Q9NXL9 1143 aa16.92■□□□□ 0.3
CCHCR1-201ENST00000376266 FAM198AQ9UFP1 575 aa16.92■□□□□ 0.3
CCHCR1-201ENST00000376266 HPSEQ9Y251 543 aa16.92■□□□□ 0.3
CCHCR1-201ENST00000376266 NFE2L3Q9Y4A8 694 aa16.92■□□□□ 0.3
CCHCR1-201ENST00000376266 A0A0U1RQJ8 604 aa16.92■□□□□ 0.3
CCHCR1-201ENST00000376266 TUBBP07437 444 aa16.92■□□□□ 0.3
CCHCR1-201ENST00000376266 KIF23Q02241 960 aaPredicted RBP16.92■□□□□ 0.3
CCHCR1-201ENST00000376266 FOXP4Q8IVH2 680 aaPredicted RBP16.92■□□□□ 0.3
CCHCR1-201ENST00000376266 ATRIPQ8WXE1 791 aa16.92■□□□□ 0.3
CCHCR1-201ENST00000376266 FAM107BQ9H098 131 aa16.92■□□□□ 0.3
CCHCR1-201ENST00000376266 GPHNQ9NQX3 736 aaPredicted RBP16.92■□□□□ 0.3
CCHCR1-201ENST00000376266 TMOD2Q9NZR1 351 aa16.92■□□□□ 0.3
CCHCR1-201ENST00000376266 CDK5RAP2Q96SN8 1893 aa16.92■□□□□ 0.3
CCHCR1-201ENST00000376266 CYP2D7A0A087X1C5 515 aa16.91■□□□□ 0.3
CCHCR1-201ENST00000376266 USP17L12C9JPN9 530 aa16.91■□□□□ 0.3
CCHCR1-201ENST00000376266 USP17L21D6R901 530 aa16.91■□□□□ 0.3
CCHCR1-201ENST00000376266 SMIM22K7EJ46 135 aa16.91■□□□□ 0.3
CCHCR1-201ENST00000376266 CPLX1O14810 134 aa16.91■□□□□ 0.3
CCHCR1-201ENST00000376266 TFRCP02786 760 aaKnown RBP16.91■□□□□ 0.3
CCHCR1-201ENST00000376266 PSEN1P49768 467 aa16.91■□□□□ 0.3
CCHCR1-201ENST00000376266 HAND2P61296 217 aa16.91■□□□□ 0.3
CCHCR1-201ENST00000376266 EVX2Q03828 476 aa16.91■□□□□ 0.3
CCHCR1-201ENST00000376266 IDI2Q9BXS1 227 aa16.91■□□□□ 0.3
CCHCR1-201ENST00000376266 BAZ2AQ9UIF9 1905 aaKnown RBP16.91■□□□□ 0.3
CCHCR1-201ENST00000376266 IQCA1LA6NCM1 817 aa16.91■□□□□ 0.3
CCHCR1-201ENST00000376266 ALX1Q15699 326 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms